RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 FSCN2O14926 492 aa12.99□□□□□ -0.33
HDGFL3-204ENST00000563790 WEE2P0C1S8 567 aa12.99□□□□□ -0.33
HDGFL3-204ENST00000563790 CCR10P46092 362 aa12.99□□□□□ -0.33
HDGFL3-204ENST00000563790 SLC4A3P48751 1232 aa12.99□□□□□ -0.33
HDGFL3-204ENST00000563790 STARD6P59095 220 aa12.99□□□□□ -0.33
HDGFL3-204ENST00000563790 ERVFC1P60507 584 aa12.99□□□□□ -0.33
HDGFL3-204ENST00000563790 TBC1D9Q6ZT07 1266 aa12.99□□□□□ -0.33
HDGFL3-204ENST00000563790 OTOP3Q7RTS5 596 aa12.99□□□□□ -0.33
HDGFL3-204ENST00000563790 MORC4Q8TE76 937 aa12.99□□□□□ -0.33
HDGFL3-204ENST00000563790 APBB2Q92870 758 aa12.99□□□□□ -0.33
HDGFL3-204ENST00000563790 GPR20Q99678 358 aa12.99□□□□□ -0.33
HDGFL3-204ENST00000563790 SCUBE2Q9NQ36 999 aa12.99□□□□□ -0.33
HDGFL3-204ENST00000563790 PLXNB3Q9ULL4 1909 aa12.99□□□□□ -0.33
HDGFL3-204ENST00000563790 SPTBN1Q01082 2364 aaKnown RBP12.99□□□□□ -0.33
HDGFL3-204ENST00000563790 F6X3S4 739 aa12.98□□□□□ -0.33
HDGFL3-204ENST00000563790 DGKIO75912 1065 aa12.98□□□□□ -0.33
HDGFL3-204ENST00000563790 MAGEA9P43362 315 aa12.98□□□□□ -0.33
HDGFL3-204ENST00000563790 ATAT1Q5SQI0 421 aa12.98□□□□□ -0.33
HDGFL3-204ENST00000563790 TSSK4Q6SA08 328 aa12.98□□□□□ -0.33
HDGFL3-204ENST00000563790 TMEM179Q6ZVK1 233 aa12.98□□□□□ -0.33
HDGFL3-204ENST00000563790 CMTR2Q8IYT2 770 aaKnown RBP12.98□□□□□ -0.33
HDGFL3-204ENST00000563790 CPXCR1Q8N123 301 aa12.98□□□□□ -0.33
HDGFL3-204ENST00000563790 GPR152Q8TDT2 470 aa12.98□□□□□ -0.33
HDGFL3-204ENST00000563790 NKRFO15226 690 aaKnown RBP eCLIP12.97□□□□□ -0.33
HDGFL3-204ENST00000563790 KCNC4Q03721 635 aa12.97□□□□□ -0.33
HDGFL3-204ENST00000563790 NONOQ15233 471 aaKnown RBP eCLIP12.97□□□□□ -0.33
HDGFL3-204ENST00000563790 DCLRE1AQ6PJP8 1040 aa12.97□□□□□ -0.33
HDGFL3-204ENST00000563790 TTC6Q86TZ1 520 aa12.97□□□□□ -0.33
HDGFL3-204ENST00000563790 HNRNPLLQ8WVV9 542 aaKnown RBP12.97□□□□□ -0.33
HDGFL3-204ENST00000563790 KAT2BQ92831 832 aa12.97□□□□□ -0.33
HDGFL3-204ENST00000563790 SLF1Q9BQI6 1058 aa12.97□□□□□ -0.33
HDGFL3-204ENST00000563790 OSBPL7Q9BZF2 842 aa12.97□□□□□ -0.33
HDGFL3-204ENST00000563790 A1CFQ9NQ94 594 aaKnown RBP12.97□□□□□ -0.33
HDGFL3-204ENST00000563790 AAASQ9NRG9 546 aa12.97□□□□□ -0.33
HDGFL3-204ENST00000563790 HDAC6Q9UBN7 1215 aa12.97□□□□□ -0.33
HDGFL3-204ENST00000563790 COG6Q9Y2V7 657 aa12.97□□□□□ -0.33
HDGFL3-204ENST00000563790 NUP205Q92621 2012 aa12.96□□□□□ -0.33
HDGFL3-204ENST00000563790 ENO4A6NNW6 628 aa12.96□□□□□ -0.33
HDGFL3-204ENST00000563790 PPFIA3O75145 1194 aa12.96□□□□□ -0.33
HDGFL3-204ENST00000563790 ALDH1L1O75891 902 aa12.96□□□□□ -0.33
HDGFL3-204ENST00000563790 SEC24BO95487 1268 aa12.96□□□□□ -0.33
HDGFL3-204ENST00000563790 NBPF7P0C2Y1 421 aaPredicted RBP12.96□□□□□ -0.33
HDGFL3-204ENST00000563790 SF3A2Q15428 464 aaKnown RBP12.96□□□□□ -0.33
HDGFL3-204ENST00000563790 FAM83BQ5T0W9 1011 aa12.96□□□□□ -0.33
HDGFL3-204ENST00000563790 CLEC10AQ8IUN9 316 aa12.96□□□□□ -0.33
HDGFL3-204ENST00000563790 C12orf50Q8NA57 414 aaPredicted RBP12.96□□□□□ -0.33
HDGFL3-204ENST00000563790 CEP126Q9P2H0 1117 aa12.96□□□□□ -0.33
HDGFL3-204ENST00000563790 ATXN7O15265 892 aaPredicted RBP12.95□□□□□ -0.34
HDGFL3-204ENST00000563790 TREHO43280 583 aa12.95□□□□□ -0.34
HDGFL3-204ENST00000563790 TDGF1P13385 188 aa12.95□□□□□ -0.34
HDGFL3-204ENST00000563790 THPOP40225 353 aa12.95□□□□□ -0.34
HDGFL3-204ENST00000563790 NRLP54845 237 aa12.95□□□□□ -0.34
HDGFL3-204ENST00000563790 ICA1Q05084 483 aa12.95□□□□□ -0.34
HDGFL3-204ENST00000563790 GABPAQ06546 454 aa12.95□□□□□ -0.34
HDGFL3-204ENST00000563790 CCDC27Q2M243 656 aa12.95□□□□□ -0.34
HDGFL3-204ENST00000563790 RARS2Q5T160 578 aaKnown RBP12.95□□□□□ -0.34
HDGFL3-204ENST00000563790 NAA16Q6N069 864 aaPredicted RBP12.95□□□□□ -0.34
HDGFL3-204ENST00000563790 ADGRA1Q86SQ6 560 aa12.95□□□□□ -0.34
HDGFL3-204ENST00000563790 C7orf31Q8N865 590 aa12.95□□□□□ -0.34
HDGFL3-204ENST00000563790 AFG1LQ8WV93 481 aa12.95□□□□□ -0.34
HDGFL3-204ENST00000563790 OSBPL6Q9BZF3 934 aa12.95□□□□□ -0.34
HDGFL3-204ENST00000563790 HMG20BQ9P0W2 317 aa12.95□□□□□ -0.34
HDGFL3-204ENST00000563790 HCFC2Q9Y5Z7 792 aa12.95□□□□□ -0.34
HDGFL3-204ENST00000563790 IL16Q14005 1332 aa12.94□□□□□ -0.34
HDGFL3-204ENST00000563790 HYAL3O43820 417 aaPredicted RBP12.94□□□□□ -0.34
HDGFL3-204ENST00000563790 RFX5P48382 616 aaPredicted RBP12.94□□□□□ -0.34
HDGFL3-204ENST00000563790 PI16Q6UXB8 463 aa12.94□□□□□ -0.34
HDGFL3-204ENST00000563790 RASGRP2Q7LDG7 609 aa12.94□□□□□ -0.34
HDGFL3-204ENST00000563790 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.94□□□□□ -0.34
HDGFL3-204ENST00000563790 SLC44A3Q8N4M1 653 aa12.94□□□□□ -0.34
HDGFL3-204ENST00000563790 ZNF513Q8N8E2 541 aaPredicted RBP12.94□□□□□ -0.34
HDGFL3-204ENST00000563790 PRPF38AQ8NAV1 312 aaKnown RBP12.94□□□□□ -0.34
HDGFL3-204ENST00000563790 SHDQ96IW2 340 aa12.94□□□□□ -0.34
HDGFL3-204ENST00000563790 DDX23Q9BUQ8 820 aaKnown RBP12.94□□□□□ -0.34
HDGFL3-204ENST00000563790 BCAS3Q9H6U6 928 aa12.94□□□□□ -0.34
HDGFL3-204ENST00000563790 ACAD9Q9H845 621 aa12.94□□□□□ -0.34
HDGFL3-204ENST00000563790 RAVER2Q9HCJ3 691 aaKnown RBP12.94□□□□□ -0.34
HDGFL3-204ENST00000563790 KLK13Q9UKR3 277 aa12.94□□□□□ -0.34
HDGFL3-204ENST00000563790 NF1P21359 2839 aa12.94□□□□□ -0.34
HDGFL3-204ENST00000563790 DOCK6Q96HP0 2047 aa12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 KANSL1LA0AUZ9 987 aa12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 ZNF806P0C7X5 589 aa12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 OAZ1P54368 228 aa12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 SIM2Q14190 667 aaPredicted RBP12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 PPP2R5BQ15173 497 aa12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 PLPP4Q5VZY2 271 aa12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 CCDC149Q6ZUS6 474 aa12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 SERINC5Q86VE9 423 aa12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 CCDC146Q8IYE0 955 aa12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 SPATA5Q8NB90 893 aa12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 LSM14AQ8ND56 463 aaKnown RBP12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 RSAD2Q8WXG1 361 aa12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 MKNK1Q9BUB5 465 aa12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 SLC38A10Q9HBR0 1119 aa12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 HOMER2Q9NSB8 354 aa12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 LRP2BPQ9P2M1 347 aa12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 GREB1LQ9C091 1923 aaPredicted RBP12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 GOLGA4Q13439 2230 aaKnown RBP12.93□□□□□ -0.34
HDGFL3-204ENST00000563790 LAMA4Q16363 1823 aa12.92□□□□□ -0.34
HDGFL3-204ENST00000563790 FRMPD2Q68DX3 1309 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms