RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 KAT6AQ92794 2004 aa12.1□□□□□ -0.47
SF3B3-204ENST00000563739 DMXL1Q9Y485 3027 aa12.1□□□□□ -0.47
SF3B3-204ENST00000563739 B4DLN1 442 aa12.1□□□□□ -0.47
SF3B3-204ENST00000563739 H3BRB1 525 aa12.1□□□□□ -0.47
SF3B3-204ENST00000563739 STXBP3O00186 592 aa12.1□□□□□ -0.47
SF3B3-204ENST00000563739 CAND2O75155 1236 aa12.1□□□□□ -0.47
SF3B3-204ENST00000563739 HOXA13P31271 388 aaPredicted RBP12.1□□□□□ -0.47
SF3B3-204ENST00000563739 MRPL12P52815 198 aaKnown RBP12.1□□□□□ -0.47
SF3B3-204ENST00000563739 RBM10P98175 930 aaKnown RBP12.1□□□□□ -0.47
SF3B3-204ENST00000563739 LPIN1Q14693 890 aa12.1□□□□□ -0.47
SF3B3-204ENST00000563739 DGKHQ86XP1 1220 aa12.1□□□□□ -0.47
SF3B3-204ENST00000563739 LMBR1Q8WVP7 490 aa12.1□□□□□ -0.47
SF3B3-204ENST00000563739 MFSD14AQ96MC6 490 aa12.1□□□□□ -0.47
SF3B3-204ENST00000563739 LMAN2LQ9H0V9 348 aa12.1□□□□□ -0.47
SF3B3-204ENST00000563739 TUT1Q9H6E5 874 aaKnown RBP12.1□□□□□ -0.47
SF3B3-204ENST00000563739 SETD4Q9NVD3 440 aa12.1□□□□□ -0.47
SF3B3-204ENST00000563739 CD207Q9UJ71 328 aa12.1□□□□□ -0.47
SF3B3-204ENST00000563739 WDR87Q6ZQQ6 2873 aa12.1□□□□□ -0.47
SF3B3-204ENST00000563739 RIF1Q5UIP0 2472 aaKnown RBP12.1□□□□□ -0.47
SF3B3-204ENST00000563739 CCDC171Q6TFL3 1326 aa12.1□□□□□ -0.47
SF3B3-204ENST00000563739 FAM186AA6NE01 2351 aa12.1□□□□□ -0.47
SF3B3-204ENST00000563739 CSPG5O95196 566 aa12.09□□□□□ -0.47
SF3B3-204ENST00000563739 CFBP00751 764 aa12.09□□□□□ -0.47
SF3B3-204ENST00000563739 ITGB1P05556 798 aa12.09□□□□□ -0.47
SF3B3-204ENST00000563739 RB1P06400 928 aa12.09□□□□□ -0.47
SF3B3-204ENST00000563739 RRP1P56182 461 aaKnown RBP12.09□□□□□ -0.47
SF3B3-204ENST00000563739 ZXDAP98168 799 aa12.09□□□□□ -0.47
SF3B3-204ENST00000563739 RTN4RL1Q86UN2 441 aaPredicted RBP12.09□□□□□ -0.47
SF3B3-204ENST00000563739 FIBCD1Q8N539 461 aa12.09□□□□□ -0.47
SF3B3-204ENST00000563739 IL17RAQ96F46 866 aa12.09□□□□□ -0.47
SF3B3-204ENST00000563739 GPR20Q99678 358 aa12.09□□□□□ -0.47
SF3B3-204ENST00000563739 MRPL11Q9Y3B7 192 aaKnown RBP12.09□□□□□ -0.47
SF3B3-204ENST00000563739 MRPL42Q9Y6G3 142 aaKnown RBP12.09□□□□□ -0.47
SF3B3-204ENST00000563739 ZNF292O60281 2723 aa12.09□□□□□ -0.47
SF3B3-204ENST00000563739 ST18O60284 1047 aa12.08□□□□□ -0.48
SF3B3-204ENST00000563739 KDM4AO75164 1064 aa12.08□□□□□ -0.48
SF3B3-204ENST00000563739 DGKIO75912 1065 aa12.08□□□□□ -0.48
SF3B3-204ENST00000563739 PDGFBP01127 241 aaPredicted RBP12.08□□□□□ -0.48
SF3B3-204ENST00000563739 ARP10275 920 aa12.08□□□□□ -0.48
SF3B3-204ENST00000563739 GHRP10912 638 aa12.08□□□□□ -0.48
SF3B3-204ENST00000563739 MYCLP12524 364 aaPredicted RBP12.08□□□□□ -0.48
SF3B3-204ENST00000563739 PDE1AP54750 535 aa12.08□□□□□ -0.48
SF3B3-204ENST00000563739 PTPN5P54829 565 aa12.08□□□□□ -0.48
SF3B3-204ENST00000563739 MCMDC2Q4G0Z9 681 aa12.08□□□□□ -0.48
SF3B3-204ENST00000563739 ASPRV1Q53RT3 343 aa12.08□□□□□ -0.48
SF3B3-204ENST00000563739 MCF2L2Q86YR7 1114 aa12.08□□□□□ -0.48
SF3B3-204ENST00000563739 SPPL3Q8TCT6 385 aa12.08□□□□□ -0.48
SF3B3-204ENST00000563739 EVI5LQ96CN4 794 aa12.08□□□□□ -0.48
SF3B3-204ENST00000563739 ZBTB10Q96DT7 871 aa12.08□□□□□ -0.48
SF3B3-204ENST00000563739 INPP4AQ96PE3 977 aaPredicted RBP12.08□□□□□ -0.48
SF3B3-204ENST00000563739 C11orf84Q9BUA3 381 aaPredicted RBP12.08□□□□□ -0.48
SF3B3-204ENST00000563739 IL25Q9H293 177 aa12.08□□□□□ -0.48
SF3B3-204ENST00000563739 CHMP4BQ9H444 224 aaKnown RBP12.08□□□□□ -0.48
SF3B3-204ENST00000563739 AGO3Q9H9G7 860 aaKnown RBP12.08□□□□□ -0.48
SF3B3-204ENST00000563739 BARX2Q9UMQ3 279 aaPredicted RBP12.08□□□□□ -0.48
SF3B3-204ENST00000563739 PLAGL2Q9UPG8 496 aa12.08□□□□□ -0.48
SF3B3-204ENST00000563739 FAM50BQ9Y247 325 aa12.08□□□□□ -0.48
SF3B3-204ENST00000563739 B4E1Z4 1266 aa12.07□□□□□ -0.48
SF3B3-204ENST00000563739 ENPP3O14638 875 aa12.07□□□□□ -0.48
SF3B3-204ENST00000563739 CYTH3O43739 400 aa12.07□□□□□ -0.48
SF3B3-204ENST00000563739 PCP11498 1178 aaKnown RBP12.07□□□□□ -0.48
SF3B3-204ENST00000563739 ICAM3P32942 547 aa12.07□□□□□ -0.48
SF3B3-204ENST00000563739 GATMP50440 423 aa12.07□□□□□ -0.48
SF3B3-204ENST00000563739 COASYQ13057 564 aa12.07□□□□□ -0.48
SF3B3-204ENST00000563739 SEC23AQ15436 765 aa12.07□□□□□ -0.48
SF3B3-204ENST00000563739 MARCH8Q5T0T0 291 aa12.07□□□□□ -0.48
SF3B3-204ENST00000563739 MFSD6Q6ZSS7 791 aa12.07□□□□□ -0.48
SF3B3-204ENST00000563739 DENND4AQ7Z401 1863 aa12.07□□□□□ -0.48
SF3B3-204ENST00000563739 FBXL6Q8N531 539 aa12.07□□□□□ -0.48
SF3B3-204ENST00000563739 SUSD6Q92537 303 aa12.07□□□□□ -0.48
SF3B3-204ENST00000563739 APBB2Q92870 758 aa12.07□□□□□ -0.48
SF3B3-204ENST00000563739 POP1Q99575 1024 aaKnown RBP12.07□□□□□ -0.48
SF3B3-204ENST00000563739 UPF3BQ9BZI7 483 aaKnown RBP12.07□□□□□ -0.48
SF3B3-204ENST00000563739 IGFLR1Q9H665 355 aa12.07□□□□□ -0.48
SF3B3-204ENST00000563739 HCSTQ9UBK5 93 aa12.07□□□□□ -0.48
SF3B3-204ENST00000563739 MAD2L2Q9UI95 211 aa12.07□□□□□ -0.48
SF3B3-204ENST00000563739 USP15Q9Y4E8 981 aaPredicted RBP12.07□□□□□ -0.48
SF3B3-204ENST00000563739 EPG5Q9HCE0 2579 aa12.07□□□□□ -0.48
SF3B3-204ENST00000563739 NCK2O43639 380 aa12.06□□□□□ -0.48
SF3B3-204ENST00000563739 KCNC3Q14003 757 aa12.06□□□□□ -0.48
SF3B3-204ENST00000563739 FBXO47Q5MNV8 452 aa12.06□□□□□ -0.48
SF3B3-204ENST00000563739 EFHBQ8N7U6 833 aa12.06□□□□□ -0.48
SF3B3-204ENST00000563739 P2RX5Q93086 422 aa12.06□□□□□ -0.48
SF3B3-204ENST00000563739 PBXIP1Q96AQ6 731 aa12.06□□□□□ -0.48
SF3B3-204ENST00000563739 SENP2Q9HC62 589 aa12.06□□□□□ -0.48
SF3B3-204ENST00000563739 VAT1LQ9HCJ6 419 aa12.06□□□□□ -0.48
SF3B3-204ENST00000563739 KMT2BQ9UMN6 2715 aaPredicted RBP12.05□□□□□ -0.48
SF3B3-204ENST00000563739 MBLAC1A4D2B0 266 aaPredicted RBP12.05□□□□□ -0.48
SF3B3-204ENST00000563739 PALM3A6NDB9 673 aaPredicted RBP12.05□□□□□ -0.48
SF3B3-204ENST00000563739 SPATA31C2B4DYI2 1134 aa12.05□□□□□ -0.48
SF3B3-204ENST00000563739 GFRA3O60609 400 aa12.05□□□□□ -0.48
SF3B3-204ENST00000563739 TGFB3P10600 412 aa12.05□□□□□ -0.48
SF3B3-204ENST00000563739 METTL7BQ6UX53 244 aa12.05□□□□□ -0.48
SF3B3-204ENST00000563739 CYFIP1Q7L576 1253 aa12.05□□□□□ -0.48
SF3B3-204ENST00000563739 ASCL5Q7RTU5 278 aa12.05□□□□□ -0.48
SF3B3-204ENST00000563739 ATP8B4Q8TF62 1192 aa12.05□□□□□ -0.48
SF3B3-204ENST00000563739 ESR2Q92731 530 aa12.05□□□□□ -0.48
SF3B3-204ENST00000563739 ZSCAN10Q96SZ4 725 aaPredicted RBP12.05□□□□□ -0.48
SF3B3-204ENST00000563739 AMNQ9BXJ7 453 aa12.05□□□□□ -0.48
SF3B3-204ENST00000563739 ZSWIM5Q9P217 1185 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms