RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 NSUN6Q8TEA1 469 aaKnown RBP9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 ATP6V0A1Q93050 837 aa9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 NKD2Q969F2 451 aaPredicted RBP9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 RMDN1Q96DB5 314 aa9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 IWS1Q96ST2 819 aa9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 TMEM47Q9BQJ4 181 aa9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 MAF1Q9H063 256 aa9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 S1PR5Q9H228 398 aa9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 RNPEPQ9H4A4 650 aa9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 EHMT1Q9H9B1 1298 aa9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 MRPL42Q9Y6G3 142 aaKnown RBP9.08□□□□□ -0.96
HERPUD1-206ENST00000563343 EIF3JO75822 258 aaKnown RBP9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 BRD1O95696 1058 aa9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 CHRNA1P02708 482 aa9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 ZFYP08048 801 aaPredicted RBP9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 SLC3A2P08195 630 aaKnown RBP9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 SMIM10L2AP0DMW4 78 aa9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 SMIM10L2BP0DMW5 78 aa9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 ARP10275 920 aa9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 CTDSPL2Q05D32 466 aa9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 ZNF543Q08ER8 600 aa9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 MGAT3Q09327 533 aa9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 BTG3Q14201 252 aaPredicted RBP9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 USH1GQ495M9 461 aa9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 NAALADL2Q58DX5 795 aa9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 CELF3Q5SZQ8 465 aaKnown RBP9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 RBM23Q86U06 439 aaKnown RBP9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 POF1BQ8WVV4 589 aa9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 LINC01599Q8WXQ3 324 aa9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 KIF12Q96FN5 646 aa9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 RMDN3Q96TC7 470 aa9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 NAPBQ9H115 298 aa9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 ANAPC4Q9UJX5 808 aa9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 LAMA4Q16363 1823 aa9.07□□□□□ -0.96
HERPUD1-206ENST00000563343 CHD6Q8TD26 2715 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 TPRP12270 2363 aaKnown RBP9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 H3BRB1 525 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 ENPP3O14638 875 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 ORC4O43929 436 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 SORBS3O60504 671 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 NR3C2P08235 984 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 TOP1P11387 765 aaKnown RBP9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 EIF2AK2P19525 551 aaKnown RBP9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 MCTP2Q6DN12 878 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 CMTR2Q8IYT2 770 aaKnown RBP9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 KLHL23Q8NBE8 558 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 PANK1Q8TE04 598 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 PPP2R3CQ969Q6 453 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 SPATA33Q96N06 139 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 NACAP1Q9BZK3 213 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 CPVLQ9H3G5 476 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 SMOC2Q9H3U7 446 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 TUT1Q9H6E5 874 aaKnown RBP9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 BCAS3Q9H6U6 928 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 PXMP2Q9NR77 195 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 ECHDC1Q9NTX5 307 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 TCP11L1Q9NUJ3 509 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 MRVI1Q9Y6F6 885 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 OTOGLQ3ZCN5 2332 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 CFAP47Q6ZTR5 3102 aa9.06□□□□□ -0.96
HERPUD1-206ENST00000563343 ACACBO00763 2458 aa9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 MAP1BP46821 2468 aaKnown RBP9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 C2orf16Q68DN1 1984 aa9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 OPLAHO14841 1288 aa9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 PER2O15055 1255 aa9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 SMARCA5O60264 1052 aaPredicted RBP9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 RANBP6O60518 1105 aaKnown RBP9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 HMMRO75330 724 aa9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 GGPS1O95749 300 aa9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 LGALS2P05162 132 aa9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 UBA1P22314 1058 aaKnown RBP9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 GHRHRQ02643 423 aa9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 LPIN1Q14693 890 aa9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 DUSP6Q16828 381 aa9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 CWF19L1Q69YN2 538 aaKnown RBP9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 ASTLQ6HA08 431 aaPredicted RBP9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 SYCE2Q6PIF2 218 aa9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 TMEM184AQ6ZMB5 413 aa9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 RTN4RL1Q86UN2 441 aaPredicted RBP9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 KREMEN2Q8NCW0 462 aa9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 GPKOWQ92917 476 aaPredicted RBP eCLIP9.05□□□□□ -0.961e-6■■■■□ 20.5
HERPUD1-206ENST00000563343 CNTNAP3BQ96NU0 1288 aa9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 CNTNAP3Q9BZ76 1288 aa9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 ZBTB40Q9NUA8 1239 aa9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 SUPT16HQ9Y5B9 1047 aaKnown RBP9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 ABCB11O95342 1321 aa9.05□□□□□ -0.96
HERPUD1-206ENST00000563343 BAHCC1Q9P281 2608 aa9.04□□□□□ -0.96
HERPUD1-206ENST00000563343 GHRP10912 638 aa9.04□□□□□ -0.96
HERPUD1-206ENST00000563343 CHRM1P11229 460 aaPredicted RBP9.04□□□□□ -0.96
HERPUD1-206ENST00000563343 CLCN5P51795 746 aa9.04□□□□□ -0.96
HERPUD1-206ENST00000563343 CDC37Q16543 378 aaPredicted RBP9.04□□□□□ -0.96
HERPUD1-206ENST00000563343 ZMYM1Q5SVZ6 1142 aa9.04□□□□□ -0.96
HERPUD1-206ENST00000563343 ARHGEF16Q5VV41 709 aa9.04□□□□□ -0.96
HERPUD1-206ENST00000563343 TSHZ3Q63HK5 1081 aa9.04□□□□□ -0.96
HERPUD1-206ENST00000563343 DGLUCYQ7Z3D6 616 aa9.04□□□□□ -0.96
HERPUD1-206ENST00000563343 UBALD2Q8IYN6 164 aa9.04□□□□□ -0.96
HERPUD1-206ENST00000563343 IL31RAQ8NI17 732 aa9.04□□□□□ -0.96
HERPUD1-206ENST00000563343 LMBR1Q8WVP7 490 aa9.04□□□□□ -0.96
HERPUD1-206ENST00000563343 PDCD2LQ9BRP1 358 aa9.04□□□□□ -0.96
HERPUD1-206ENST00000563343 TLE6Q9H808 572 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms