RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 CWC25Q9NXE8 425 aaPredicted RBP6.44□□□□□ -1.38
CNOT1-205ENST00000563283 ABCC4O15439 1325 aa6.44□□□□□ -1.38
CNOT1-205ENST00000563283 ARID1BQ8NFD5 2236 aaPredicted RBP6.44□□□□□ -1.38
CNOT1-205ENST00000563283 SPEF2Q9C093 1822 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 MYH3P11055 1940 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 TIAM2Q8IVF5 1701 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 BCAR3O75815 825 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 UBOX5O94941 541 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 DDX58O95786 925 aaKnown RBP6.43□□□□□ -1.38
CNOT1-205ENST00000563283 HPXP02790 462 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 CSF1RP07333 972 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 RAC2P15153 192 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 GBP1P32455 592 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 EGR3Q06889 387 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 FZD5Q13467 585 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 ALDH1L2Q3SY69 923 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 OVOS1Q6IE37 1185 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 KSR1Q8IVT5 923 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 TTLL11Q8NHH1 800 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 FRAT1Q92837 279 aaPredicted RBP6.43□□□□□ -1.38
CNOT1-205ENST00000563283 FAM84AQ96KN4 292 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 ADAMTS10Q9H324 1103 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 UBP1Q9NZI7 540 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 CDHR2Q9BYE9 1310 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 LTBP3Q9NS15 1303 aa6.43□□□□□ -1.38
CNOT1-205ENST00000563283 SHISA3A0PJX4 238 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 NPHP1O15259 732 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 PDE8AO60658 829 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 NBPF7P0C2Y1 421 aaPredicted RBP6.42□□□□□ -1.38
CNOT1-205ENST00000563283 RAG1P15918 1043 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 ALDH1B1P30837 517 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 HK2P52789 917 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 RNF4P78317 190 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 CDCP2Q5VXM1 449 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 UBE3BQ7Z3V4 1068 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 REXO1Q8N1G1 1221 aaKnown RBP6.42□□□□□ -1.38
CNOT1-205ENST00000563283 TMEM87AQ8NBN3 555 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 BHLHE22Q8NFJ8 381 aaPredicted RBP6.42□□□□□ -1.38
CNOT1-205ENST00000563283 ABHD4Q8TB40 342 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 SLC38A3Q99624 504 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 NT5C1AQ9BXI3 368 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 USP44Q9H0E7 712 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 GREM2Q9H772 168 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 RNF181Q9P0P0 153 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 NOB1Q9ULX3 412 aaKnown RBP6.42□□□□□ -1.38
CNOT1-205ENST00000563283 ATP6V0A2Q9Y487 856 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 PCDHA11Q9Y5I1 949 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 UTYO14607 1347 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 KIF16BQ96L93 1317 aa6.42□□□□□ -1.38
CNOT1-205ENST00000563283 A0A1B0GUL6 1792 aa6.41□□□□□ -1.38
CNOT1-205ENST00000563283 BBOX1O75936 387 aa6.41□□□□□ -1.38
CNOT1-205ENST00000563283 ZGLP1P0C6A0 271 aa6.41□□□□□ -1.38
CNOT1-205ENST00000563283 CTSWP56202 376 aa6.41□□□□□ -1.38
CNOT1-205ENST00000563283 CHMP4BP1P59074 171 aa6.41□□□□□ -1.38
CNOT1-205ENST00000563283 ERVFC1P60507 584 aa6.41□□□□□ -1.38
CNOT1-205ENST00000563283 GPSM2P81274 684 aa6.41□□□□□ -1.38
CNOT1-205ENST00000563283 APOBRQ0VD83 1088 aa6.41□□□□□ -1.38
CNOT1-205ENST00000563283 GRAPQ13588 217 aa6.41□□□□□ -1.38
CNOT1-205ENST00000563283 ZNF124Q15973 351 aa6.41□□□□□ -1.38
CNOT1-205ENST00000563283 SEZ6Q53EL9 994 aa6.41□□□□□ -1.38
CNOT1-205ENST00000563283 MPZL3Q6UWV2 235 aa6.41□□□□□ -1.38
CNOT1-205ENST00000563283 PRR23BQ6ZRT6 265 aa6.41□□□□□ -1.38
CNOT1-205ENST00000563283 SP8Q8IXZ3 490 aa6.41□□□□□ -1.38
CNOT1-205ENST00000563283 GRAPLQ8TC17 118 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-205ENST00000563283 MYLIPQ8WY64 445 aa6.41□□□□□ -1.38
CNOT1-205ENST00000563283 RPGRQ92834 1020 aaKnown RBP6.41□□□□□ -1.38
CNOT1-205ENST00000563283 RBM17Q96I25 401 aaKnown RBP6.41□□□□□ -1.38
CNOT1-205ENST00000563283 GPR101Q96P66 508 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-205ENST00000563283 PLA2G12BQ9BX93 195 aa6.41□□□□□ -1.38
CNOT1-205ENST00000563283 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.41□□□□□ -1.38
CNOT1-205ENST00000563283 CNNM2Q9H8M5 875 aa6.41□□□□□ -1.38
CNOT1-205ENST00000563283 ZNF277Q9NRM2 450 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-205ENST00000563283 PTPRCP08575 1304 aa6.41□□□□□ -1.38
CNOT1-205ENST00000563283 ZNF646O15015 1829 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-205ENST00000563283 MEIS3P2A8K0S8 358 aa6.4□□□□□ -1.38
CNOT1-205ENST00000563283 GRM8O00222 908 aa6.4□□□□□ -1.38
CNOT1-205ENST00000563283 IPO8O15397 1037 aaKnown RBP6.4□□□□□ -1.38
CNOT1-205ENST00000563283 PLIN1O60240 522 aa6.4□□□□□ -1.38
CNOT1-205ENST00000563283 ZNF165P49910 485 aa6.4□□□□□ -1.38
CNOT1-205ENST00000563283 RRP1P56182 461 aaKnown RBP6.4□□□□□ -1.38
CNOT1-205ENST00000563283 RPS8P62241 208 aaKnown RBP6.4□□□□□ -1.38
CNOT1-205ENST00000563283 CLCQ05315 142 aa6.4□□□□□ -1.38
CNOT1-205ENST00000563283 PKN1Q16512 942 aa6.4□□□□□ -1.38
CNOT1-205ENST00000563283 CCDC93Q567U6 631 aa6.4□□□□□ -1.38
CNOT1-205ENST00000563283 ZKSCAN2Q63HK3 967 aa6.4□□□□□ -1.38
CNOT1-205ENST00000563283 SLC4A10Q6U841 1118 aa6.4□□□□□ -1.38
CNOT1-205ENST00000563283 SLITRK4Q8IW52 837 aa6.4□□□□□ -1.38
CNOT1-205ENST00000563283 ANKRD44Q8N8A2 993 aa6.4□□□□□ -1.38
CNOT1-205ENST00000563283 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-205ENST00000563283 PDZD8Q8NEN9 1154 aa6.4□□□□□ -1.38
CNOT1-205ENST00000563283 ENOX1Q8TC92 643 aaKnown RBP6.4□□□□□ -1.38
CNOT1-205ENST00000563283 ZNF526Q8TF50 670 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-205ENST00000563283 ATG4CQ96DT6 458 aa6.4□□□□□ -1.38
CNOT1-205ENST00000563283 SUCLG2Q96I99 432 aa6.4□□□□□ -1.38
CNOT1-205ENST00000563283 PSMD1Q99460 953 aa6.4□□□□□ -1.38
CNOT1-205ENST00000563283 RTFDC1Q9BY42 306 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-205ENST00000563283 API5Q9BZZ5 524 aaKnown RBP6.4□□□□□ -1.38
CNOT1-205ENST00000563283 TAOK3Q9H2K8 898 aa6.4□□□□□ -1.38
CNOT1-205ENST00000563283 SP110Q9HB58 689 aa6.4□□□□□ -1.38
CNOT1-205ENST00000563283 NMRK2Q9NPI5 230 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms