RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 RBM10P98175 930 aaKnown RBP11.2□□□□□ -0.62
HERC1-210ENST00000560897 UBE3AQ05086 875 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 HIC1Q14526 733 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 DUSP6Q16828 381 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 PAN2Q504Q3 1202 aaKnown RBP11.2□□□□□ -0.62
HERC1-210ENST00000560897 ARHGEF16Q5VV41 709 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 CWF19L1Q69YN2 538 aaKnown RBP11.2□□□□□ -0.62
HERC1-210ENST00000560897 TTBK2Q6IQ55 1244 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 RASGRP2Q7LDG7 609 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 FTSJ3Q8IY81 847 aaKnown RBP11.2□□□□□ -0.62
HERC1-210ENST00000560897 TDRD5Q8NAT2 981 aaKnown RBP11.2□□□□□ -0.62
HERC1-210ENST00000560897 IWS1Q96ST2 819 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 AAASQ9NRG9 546 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 FBXL21Q9UKT6 434 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 PCDHB12Q9Y5F1 795 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 R4GN57 208 aa11.2□□□□□ -0.62
HERC1-210ENST00000560897 FRMPD2Q68DX3 1309 aaPredicted RBP11.19□□□□□ -0.62
HERC1-210ENST00000560897 STK25O00506 426 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 SORBS3O60504 671 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 ASGR2P07307 311 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 STAG3L1P0CL83 205 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 ATP5JP18859 108 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 ACAP1Q15027 740 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 USH1GQ495M9 461 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 TPRNQ4KMQ1 711 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 PDE12Q6L8Q7 609 aaKnown RBP11.19□□□□□ -0.62
HERC1-210ENST00000560897 LLGL2Q6P1M3 1020 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 BTNL9Q6UXG8 535 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 ITPRIPQ8IWB1 547 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 VN1R2Q8NFZ6 395 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 RMDN3Q96TC7 470 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 S1PR5Q9H228 398 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 SMOC2Q9H3U7 446 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 GPCPD1Q9NPB8 672 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 CDV3Q9UKY7 258 aaKnown RBP11.19□□□□□ -0.62
HERC1-210ENST00000560897 KAT6AQ92794 2004 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 OTOGLQ3ZCN5 2332 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 PLXNA4Q9HCM2 1894 aa11.19□□□□□ -0.62
HERC1-210ENST00000560897 H3BRB1 525 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 ENPP3O14638 875 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 GPAA1O43292 621 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 EIF3JO75822 258 aaKnown RBP11.18□□□□□ -0.62
HERC1-210ENST00000560897 ATXN8OSP0DMR3 200 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 HOXD8P13378 290 aaPredicted RBP11.18□□□□□ -0.62
HERC1-210ENST00000560897 ZKSCAN2Q63HK3 967 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 CEP85Q6P2H3 762 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 KCNV1Q6PIU1 500 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 TMEM184AQ6ZMB5 413 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 RSPH3Q86UC2 560 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 NPAS4Q8IUM7 802 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 TRMT2AQ8IZ69 625 aaKnown RBP11.18□□□□□ -0.62
HERC1-210ENST00000560897 PLCD3Q8N3E9 789 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 RGS22Q8NE09 1264 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 CASP10Q92851 521 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 OSBPL7Q9BZF2 842 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 RNPEPQ9H4A4 650 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 TUT1Q9H6E5 874 aaKnown RBP11.18□□□□□ -0.62
HERC1-210ENST00000560897 MLXIPQ9HAP2 919 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 EPB41L4AQ9HCS5 686 aaPredicted RBP11.18□□□□□ -0.62
HERC1-210ENST00000560897 LRFN2Q9ULH4 789 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 FAM208BQ5VWN6 2430 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 WDR87Q6ZQQ6 2873 aa11.18□□□□□ -0.62
HERC1-210ENST00000560897 CHD6Q8TD26 2715 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 NOP56O00567 594 aaKnown RBP11.17□□□□□ -0.62
HERC1-210ENST00000560897 PI15O43692 258 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 GGPS1O95749 300 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 EIF2AK2P19525 551 aaKnown RBP11.17□□□□□ -0.62
HERC1-210ENST00000560897 MTHFRP42898 656 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 ARHGAP4P98171 946 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 ITIH3Q06033 890 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 PPARAQ07869 468 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 DMWDQ09019 674 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 HSDL1Q3SXM5 330 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 FAM26DQ5JW98 314 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 CELF3Q5SZQ8 465 aaKnown RBP11.17□□□□□ -0.62
HERC1-210ENST00000560897 PLPP4Q5VZY2 271 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 SYCE2Q6PIF2 218 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 MCF2L2Q86YR7 1114 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 THNSL1Q8IYQ7 743 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 DCLK2Q8N568 766 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 GPR161Q8N6U8 529 aaKnown RBP11.17□□□□□ -0.62
HERC1-210ENST00000560897 APPBP2Q92624 585 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 SECISBP2LQ93073 1101 aaKnown RBP11.17□□□□□ -0.62
HERC1-210ENST00000560897 TAAR1Q96RJ0 339 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 C16orf70Q9BSU1 422 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 MAF1Q9H063 256 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 NAPBQ9H115 298 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 POMKQ9H5K3 350 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 ENTPD7Q9NQZ7 604 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 NCDNQ9UBB6 729 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 LIMD1Q9UGP4 676 aa11.17□□□□□ -0.62
HERC1-210ENST00000560897 ZNF215Q9UL58 517 aaPredicted RBP11.17□□□□□ -0.62
HERC1-210ENST00000560897 RANBP6O60518 1105 aaKnown RBP11.16□□□□□ -0.62
HERC1-210ENST00000560897 NMT2O60551 498 aa11.16□□□□□ -0.62
HERC1-210ENST00000560897 PRKCSHP14314 528 aaPredicted RBP11.16□□□□□ -0.62
HERC1-210ENST00000560897 HOXC8P31273 242 aa11.16□□□□□ -0.62
HERC1-210ENST00000560897 ATXN1P54253 815 aaKnown RBP11.16□□□□□ -0.62
HERC1-210ENST00000560897 MYSM1Q5VVJ2 828 aa11.16□□□□□ -0.62
HERC1-210ENST00000560897 RUFY4Q6ZNE9 571 aa11.16□□□□□ -0.62
HERC1-210ENST00000560897 IFNL3Q8IZI9 196 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms