RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 FNDC3BQ53EP0 1204 aaKnown RBP6.62□□□□□ -1.35
PSMA4-221ENST00000560842 DCP2Q8IU60 420 aaKnown RBP6.62□□□□□ -1.35
PSMA4-221ENST00000560842 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.62□□□□□ -1.35
PSMA4-221ENST00000560842 PDGFDQ9GZP0 370 aaPredicted RBP6.62□□□□□ -1.35
PSMA4-221ENST00000560842 EPB41L1Q9H4G0 881 aa6.62□□□□□ -1.35
PSMA4-221ENST00000560842 SLC52A2Q9HAB3 445 aa6.62□□□□□ -1.35
PSMA4-221ENST00000560842 BTG4Q9NY30 223 aa6.62□□□□□ -1.35
PSMA4-221ENST00000560842 CLDND1Q9NY35 253 aa6.62□□□□□ -1.35
PSMA4-221ENST00000560842 PPARGC1AQ9UBK2 798 aaKnown RBP6.62□□□□□ -1.35
PSMA4-221ENST00000560842 ESYT3A0FGR9 886 aa6.61□□□□□ -1.35
PSMA4-221ENST00000560842 SMARCA5O60264 1052 aaPredicted RBP6.61□□□□□ -1.35
PSMA4-221ENST00000560842 FZD7O75084 574 aa6.61□□□□□ -1.35
PSMA4-221ENST00000560842 GRK2P25098 689 aa6.61□□□□□ -1.35
PSMA4-221ENST00000560842 GRK3P35626 688 aa6.61□□□□□ -1.35
PSMA4-221ENST00000560842 CDSNQ15517 529 aa6.61□□□□□ -1.35
PSMA4-221ENST00000560842 CYP4F22Q6NT55 531 aa6.61□□□□□ -1.35
PSMA4-221ENST00000560842 SLC7A14Q8TBB6 771 aa6.61□□□□□ -1.35
PSMA4-221ENST00000560842 TRIM39Q9HCM9 518 aa6.61□□□□□ -1.35
PSMA4-221ENST00000560842 ZNF652Q9Y2D9 606 aa6.61□□□□□ -1.35
PSMA4-221ENST00000560842 COA3Q9Y2R0 106 aaPredicted RBP6.61□□□□□ -1.35
PSMA4-221ENST00000560842 ENPP3O14638 875 aa6.6□□□□□ -1.35
PSMA4-221ENST00000560842 SOD2P04179 222 aa6.6□□□□□ -1.35
PSMA4-221ENST00000560842 SMAD4Q13485 552 aaKnown RBP6.6□□□□□ -1.35
PSMA4-221ENST00000560842 FAM26FQ5R3K3 315 aa6.6□□□□□ -1.35
PSMA4-221ENST00000560842 GLB1LQ6UWU2 654 aa6.6□□□□□ -1.35
PSMA4-221ENST00000560842 PCDH19Q8TAB3 1148 aa6.6□□□□□ -1.35
PSMA4-221ENST00000560842 SCLYQ96I15 445 aa6.6□□□□□ -1.35
PSMA4-221ENST00000560842 MRPL42Q9Y6G3 142 aaKnown RBP6.6□□□□□ -1.35
PSMA4-221ENST00000560842 ZNF536O15090 1300 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 TLDC2A0PJX2 215 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 MROH6A6NGR9 719 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 FAM47E-STBD1D6RA91 191 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 DGKIO75912 1065 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 RPL13P26373 211 aaKnown RBP6.59□□□□□ -1.35
PSMA4-221ENST00000560842 PAK1Q13153 545 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 CHRNA2Q15822 529 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 GIMAP6Q6P9H5 292 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 BORAQ6PGQ7 559 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 USP51Q70EK9 711 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 OTOP3Q7RTS5 596 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 LIMS2Q7Z4I7 341 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 HOMER1Q86YM7 354 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 DDX11Q96FC9 970 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 CHAMP1Q96JM3 812 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 CLUHP3Q96NS8 147 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 ALG1Q9BT22 464 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 AP5M1Q9H0R1 490 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 SLC6A20Q9NP91 592 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 SFMBT1Q9UHJ3 866 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 SIT1Q9Y3P8 196 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 PCDHA8Q9Y5H6 950 aa6.59□□□□□ -1.35
PSMA4-221ENST00000560842 HGSO14964 777 aaPredicted RBP6.58□□□□□ -1.36
PSMA4-221ENST00000560842 PPP1R12AO14974 1030 aaPredicted RBP6.58□□□□□ -1.36
PSMA4-221ENST00000560842 CRTAMO95727 393 aa6.58□□□□□ -1.36
PSMA4-221ENST00000560842 C16orf86Q6ZW13 317 aa6.58□□□□□ -1.36
PSMA4-221ENST00000560842 FAM124AQ86V42 546 aa6.58□□□□□ -1.36
PSMA4-221ENST00000560842 MIB1Q86YT6 1006 aa6.58□□□□□ -1.36
PSMA4-221ENST00000560842 APPBP2Q92624 585 aa6.58□□□□□ -1.36
PSMA4-221ENST00000560842 ZNF747Q9BV97 191 aa6.58□□□□□ -1.36
PSMA4-221ENST00000560842 JAM3Q9BX67 310 aa6.58□□□□□ -1.36
PSMA4-221ENST00000560842 SMOC1Q9H4F8 434 aa6.58□□□□□ -1.36
PSMA4-221ENST00000560842 IPPKQ9H8X2 491 aa6.58□□□□□ -1.36
PSMA4-221ENST00000560842 NDOR1Q9UHB4 597 aa6.58□□□□□ -1.36
PSMA4-221ENST00000560842 KCNA6P17658 529 aa6.57□□□□□ -1.36
PSMA4-221ENST00000560842 THBS2P35442 1172 aa6.57□□□□□ -1.36
PSMA4-221ENST00000560842 GUCY1A3Q02108 690 aa6.57□□□□□ -1.36
PSMA4-221ENST00000560842 TCEA2Q15560 299 aa6.57□□□□□ -1.36
PSMA4-221ENST00000560842 CRB2Q5IJ48 1285 aa6.57□□□□□ -1.36
PSMA4-221ENST00000560842 STEAP3Q658P3 488 aa6.57□□□□□ -1.36
PSMA4-221ENST00000560842 C16orf59Q7L2K0 433 aa6.57□□□□□ -1.36
PSMA4-221ENST00000560842 BRAPQ7Z569 592 aa6.57□□□□□ -1.36
PSMA4-221ENST00000560842 KIAA0907Q7Z7F0 614 aaPredicted RBP6.57□□□□□ -1.36
PSMA4-221ENST00000560842 UHMK1Q8TAS1 419 aaKnown RBP6.57□□□□□ -1.36
PSMA4-221ENST00000560842 PHOSPHO1Q8TCT1 267 aa6.57□□□□□ -1.36
PSMA4-221ENST00000560842 GORASP1Q9BQQ3 440 aa6.57□□□□□ -1.36
PSMA4-221ENST00000560842 C11orf84Q9BUA3 381 aaPredicted RBP6.57□□□□□ -1.36
PSMA4-221ENST00000560842 PCED1AQ9H1Q7 454 aa6.57□□□□□ -1.36
PSMA4-221ENST00000560842 PCDH18Q9HCL0 1135 aa6.57□□□□□ -1.36
PSMA4-221ENST00000560842 FANCLQ9NW38 375 aa6.57□□□□□ -1.36
PSMA4-221ENST00000560842 HSPBP1Q9NZL4 362 aa6.57□□□□□ -1.36
PSMA4-221ENST00000560842 PCDHA9Q9Y5H5 950 aa6.57□□□□□ -1.36
PSMA4-221ENST00000560842 TCRBV5S2A0A599 114 aa6.56□□□□□ -1.36
PSMA4-221ENST00000560842 TCRBV16S1A1N1A0A5B0 115 aa6.56□□□□□ -1.36
PSMA4-221ENST00000560842 RAPGEF3O95398 923 aa6.56□□□□□ -1.36
PSMA4-221ENST00000560842 ASMTLO95671 621 aa6.56□□□□□ -1.36
PSMA4-221ENST00000560842 CKMP06732 381 aa6.56□□□□□ -1.36
PSMA4-221ENST00000560842 CYP2C8P10632 490 aa6.56□□□□□ -1.36
PSMA4-221ENST00000560842 PLEKHG4Q58EX7 1191 aa6.56□□□□□ -1.36
PSMA4-221ENST00000560842 FGD2Q7Z6J4 655 aa6.56□□□□□ -1.36
PSMA4-221ENST00000560842 MTDHQ86UE4 582 aaKnown RBP6.56□□□□□ -1.36
PSMA4-221ENST00000560842 MAGEB10Q96LZ2 347 aaPredicted RBP6.56□□□□□ -1.36
PSMA4-221ENST00000560842 CDK5RAP1Q96SZ6 601 aaKnown RBP6.56□□□□□ -1.36
PSMA4-221ENST00000560842 VPS11Q9H270 941 aa6.56□□□□□ -1.36
PSMA4-221ENST00000560842 KRIT1O00522 736 aa6.55□□□□□ -1.36
PSMA4-221ENST00000560842 RASGRP1O95267 797 aa6.55□□□□□ -1.36
PSMA4-221ENST00000560842 NPTXRO95502 500 aa6.55□□□□□ -1.36
PSMA4-221ENST00000560842 C8BP07358 591 aa6.55□□□□□ -1.36
PSMA4-221ENST00000560842 EPHA5P54756 1037 aa6.55□□□□□ -1.36
PSMA4-221ENST00000560842 LACTBP83111 547 aaPredicted RBP6.55□□□□□ -1.36
PSMA4-221ENST00000560842 SPIRE1Q08AE8 756 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms