RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, human

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHF-208	ENST00000560734	MYPN	Q86TC9	1320 aa		27.82	■■■□□ 2.04
SHF-208	ENST00000560734	IPO5	O00410	1097 aa	Known RBP	27.82	■■■□□ 2.04
SHF-208	ENST00000560734	ATP2A1	O14983	1001 aa		27.82	■■■□□ 2.04
SHF-208	ENST00000560734	GAP43	P17677	238 aa		27.82	■■■□□ 2.04
SHF-208	ENST00000560734	ETF1	P62495	437 aa	Known RBP	27.82	■■■□□ 2.04
SHF-208	ENST00000560734	MAN2A1	Q16706	1144 aa		27.82	■■■□□ 2.04
SHF-208	ENST00000560734	EDRF1	Q3B7T1	1238 aa		27.82	■■■□□ 2.04
SHF-208	ENST00000560734	FKBP15	Q5T1M5	1219 aa		27.82	■■■□□ 2.04
SHF-208	ENST00000560734	UIMC1	Q96RL1	719 aa		27.82	■■■□□ 2.04
SHF-208	ENST00000560734	TBC1D8B	Q0IIM8	1120 aa		27.81	■■■□□ 2.04
SHF-208	ENST00000560734	PABPC4	Q13310	644 aa	Known RBP eCLIP	27.81	■■■□□ 2.04
SHF-208	ENST00000560734	SAMD1	Q6SPF0	538 aa	Predicted RBP	27.81	■■■□□ 2.04
SHF-208	ENST00000560734	CPLX3	Q8WVH0	158 aa		27.81	■■■□□ 2.04
SHF-208	ENST00000560734	NACC1	Q96RE7	527 aa		27.81	■■■□□ 2.04
SHF-208	ENST00000560734	COL20A1	Q9P218	1284 aa		27.81	■■■□□ 2.04
SHF-208	ENST00000560734	PHLPP2	Q6ZVD8	1323 aa		27.81	■■■□□ 2.04
SHF-208	ENST00000560734	PHIP	Q8WWQ0	1821 aa		27.81	■■■□□ 2.04
SHF-208	ENST00000560734		A0A1W2PQJ5	194 aa		27.81	■■■□□ 2.04
SHF-208	ENST00000560734		B4DLN1	442 aa		27.81	■■■□□ 2.04
SHF-208	ENST00000560734	AR	P10275	920 aa		27.81	■■■□□ 2.04
SHF-208	ENST00000560734	HIRA	P54198	1017 aa	Predicted RBP	27.81	■■■□□ 2.04
SHF-208	ENST00000560734	MARS	P56192	900 aa	Known RBP	27.81	■■■□□ 2.04
SHF-208	ENST00000560734	VWA3B	Q502W6	1294 aa		27.81	■■■□□ 2.04
SHF-208	ENST00000560734	CYP26C1	Q6V0L0	522 aa		27.81	■■■□□ 2.04
SHF-208	ENST00000560734	CPXCR1	Q8N123	301 aa		27.81	■■■□□ 2.04
SHF-208	ENST00000560734	OR8K1	Q8NGG5	319 aa		27.81	■■■□□ 2.04
SHF-208	ENST00000560734	ZKSCAN4	Q969J2	545 aa	Predicted RBP	27.81	■■■□□ 2.04
SHF-208	ENST00000560734	DNAJC7	Q99615	494 aa		27.81	■■■□□ 2.04
SHF-208	ENST00000560734	FHDC1	Q9C0D6	1143 aa	Predicted RBP	27.81	■■■□□ 2.04
SHF-208	ENST00000560734	JADE2	Q9NQC1	790 aa		27.81	■■■□□ 2.04
SHF-208	ENST00000560734	LUC7L2	Q9Y383	392 aa	Known RBP	27.81	■■■□□ 2.04
SHF-208	ENST00000560734	COL4A3BP	Q9Y5P4	624 aa		27.81	■■■□□ 2.04
SHF-208	ENST00000560734	SBF1	O95248	1867 aa		27.8	■■■□□ 2.04
SHF-208	ENST00000560734	CCDC175	P0C221	793 aa		27.8	■■■□□ 2.04
SHF-208	ENST00000560734	ITGB5	P18084	799 aa		27.8	■■■□□ 2.04
SHF-208	ENST00000560734	BMT2	Q1RMZ1	405 aa		27.8	■■■□□ 2.04
SHF-208	ENST00000560734	EPM2AIP1	Q7L775	607 aa	Predicted RBP	27.8	■■■□□ 2.04
SHF-208	ENST00000560734	SCFD1	Q8WVM8	642 aa		27.8	■■■□□ 2.04
SHF-208	ENST00000560734	BHMT2	Q9H2M3	363 aa		27.8	■■■□□ 2.04
SHF-208	ENST00000560734	KCTD10	Q9H3F6	313 aa		27.8	■■■□□ 2.04
SHF-208	ENST00000560734	OLFML3	Q9NRN5	406 aa		27.8	■■■□□ 2.04
SHF-208	ENST00000560734	ZHX2	Q9Y6X8	837 aa		27.8	■■■□□ 2.04
SHF-208	ENST00000560734	SSC5D	A1L4H1	1573 aa		27.79	■■■□□ 2.04
SHF-208	ENST00000560734	DSG3	P32926	999 aa		27.79	■■■□□ 2.04
SHF-208	ENST00000560734	KRT9	P35527	623 aa		27.79	■■■□□ 2.04
SHF-208	ENST00000560734	EPS15	P42566	896 aa		27.79	■■■□□ 2.04
SHF-208	ENST00000560734	TKFC	Q3LXA3	575 aa		27.79	■■■□□ 2.04
SHF-208	ENST00000560734	SH3D19	Q5HYK7	790 aa		27.79	■■■□□ 2.04
SHF-208	ENST00000560734	REPS2	Q8NFH8	660 aa		27.79	■■■□□ 2.04
SHF-208	ENST00000560734	RBM46	Q8TBY0	533 aa	Known RBP	27.79	■■■□□ 2.04
SHF-208	ENST00000560734	TRERF1	Q96PN7	1200 aa		27.79	■■■□□ 2.04
SHF-208	ENST00000560734	REEP2	Q9BRK0	252 aa		27.79	■■■□□ 2.04
SHF-208	ENST00000560734	TTYH3	Q9C0H2	523 aa		27.79	■■■□□ 2.04
SHF-208	ENST00000560734	CYP4A11	Q02928	519 aa		27.78	■■■□□ 2.04
SHF-208	ENST00000560734	COG2	Q14746	738 aa		27.78	■■■□□ 2.04
SHF-208	ENST00000560734	LRRC41	Q15345	812 aa		27.78	■■■□□ 2.04
SHF-208	ENST00000560734	MUM1L1	Q5H9M0	696 aa		27.78	■■■□□ 2.04
SHF-208	ENST00000560734	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	27.78	■■■□□ 2.04
SHF-208	ENST00000560734	DYDC2	Q96IM9	177 aa		27.78	■■■□□ 2.04
SHF-208	ENST00000560734	UNC45A	Q9H3U1	944 aa		27.78	■■■□□ 2.04
SHF-208	ENST00000560734	ADARB2	Q9NS39	739 aa	Known RBP	27.78	■■■□□ 2.04
SHF-208	ENST00000560734	KCNH7	Q9NS40	1196 aa		27.78	■■■□□ 2.04
SHF-208	ENST00000560734	TBC1D22B	Q9NU19	505 aa		27.78	■■■□□ 2.04
SHF-208	ENST00000560734	RGL1	Q9NZL6	768 aa		27.78	■■■□□ 2.04
SHF-208	ENST00000560734	LOXHD1	Q8IVV2	1947 aa		27.78	■■■□□ 2.04
SHF-208	ENST00000560734	NPHP3-ACAD11	A0A0J9YXS1	232 aa		27.78	■■■□□ 2.04
SHF-208	ENST00000560734	RPS6	P62753	249 aa	Known RBP	27.78	■■■□□ 2.04
SHF-208	ENST00000560734	UBXN2A	P68543	259 aa		27.78	■■■□□ 2.04
SHF-208	ENST00000560734	RBM10	P98175	930 aa	Known RBP	27.78	■■■□□ 2.04
SHF-208	ENST00000560734	RINT1	Q6NUQ1	792 aa		27.78	■■■□□ 2.04
SHF-208	ENST00000560734	NDST4	Q9H3R1	872 aa		27.78	■■■□□ 2.04
SHF-208	ENST00000560734	TMOD4	Q9NZQ9	345 aa		27.78	■■■□□ 2.04
SHF-208	ENST00000560734	SEL1L	Q9UBV2	794 aa		27.78	■■■□□ 2.04
SHF-208	ENST00000560734	TRAF3IP3	Q9Y228	551 aa		27.78	■■■□□ 2.04
SHF-208	ENST00000560734	AFG3L2	Q9Y4W6	797 aa		27.78	■■■□□ 2.04
SHF-208	ENST00000560734	RLF	Q13129	1914 aa		27.77	■■■□□ 2.04
SHF-208	ENST00000560734	TTC26	A0AVF1	554 aa		27.77	■■■□□ 2.04
SHF-208	ENST00000560734	TRIM65	Q6PJ69	517 aa		27.77	■■■□□ 2.04
SHF-208	ENST00000560734	RNF207	Q6ZRF8	634 aa		27.77	■■■□□ 2.04
SHF-208	ENST00000560734	CATSPERG	Q6ZRH7	1159 aa		27.77	■■■□□ 2.04
SHF-208	ENST00000560734	TOGARAM2	Q6ZUX3	1019 aa		27.77	■■■□□ 2.04
SHF-208	ENST00000560734	TPH2	Q8IWU9	490 aa		27.77	■■■□□ 2.04
SHF-208	ENST00000560734	GLIS3	Q8NEA6	775 aa		27.77	■■■□□ 2.04
SHF-208	ENST00000560734	ATG4C	Q96DT6	458 aa		27.77	■■■□□ 2.04
SHF-208	ENST00000560734	SYT17	Q9BSW7	474 aa		27.77	■■■□□ 2.04
SHF-208	ENST00000560734	AGO4	Q9HCK5	861 aa	Known RBP	27.77	■■■□□ 2.04
SHF-208	ENST00000560734	ADGRG1	Q9Y653	693 aa		27.77	■■■□□ 2.04
SHF-208	ENST00000560734	TBCA	O75347	108 aa	Known RBP	27.76	■■■□□ 2.03
SHF-208	ENST00000560734	TSR1	Q2NL82	804 aa	Known RBP	27.76	■■■□□ 2.03
SHF-208	ENST00000560734	RAD9B	Q6WBX8	426 aa		27.76	■■■□□ 2.03
SHF-208	ENST00000560734	C1orf186	Q6ZWK4	172 aa		27.76	■■■□□ 2.03
SHF-208	ENST00000560734	EDEM3	Q9BZQ6	932 aa		27.76	■■■□□ 2.03
SHF-208	ENST00000560734	GOLGB1	Q14789	3259 aa	Known RBP	27.76	■■■□□ 2.03
SHF-208	ENST00000560734	SOWAHD	A6NJG2	315 aa		27.75	■■■□□ 2.03
SHF-208	ENST00000560734	PES1	O00541	588 aa	Known RBP	27.75	■■■□□ 2.03
SHF-208	ENST00000560734	DHX15	O43143	795 aa	Known RBP	27.75	■■■□□ 2.03
SHF-208	ENST00000560734	ZBED6	P86452	979 aa		27.75	■■■□□ 2.03
SHF-208	ENST00000560734	DGKZ	Q13574	1117 aa		27.75	■■■□□ 2.03
SHF-208	ENST00000560734	CTTN	Q14247	550 aa	Known RBP	27.75	■■■□□ 2.03
SHF-208	ENST00000560734	PGM5	Q15124	567 aa		27.75	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms