RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 SGCZQ96LD1 299 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 ZMAT2Q96NC0 199 aaKnown RBP7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 PAIP2Q9BPZ3 127 aaKnown RBP7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 CARD6Q9BX69 1037 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 UNKQ9C0B0 810 aaKnown RBP7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 TNMDQ9H2S6 317 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 PDE11AQ9HCR9 933 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 POLHQ9Y253 713 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 MSH6P52701 1360 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 LOC102724428A0A0B4J2F2 783 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 HOXC13P31276 330 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 IL13P35225 146 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 MRPL12P52815 198 aaKnown RBP7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 SIK1P57059 783 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 COPS2P61201 443 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 APBA1Q02410 837 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 CENPCQ03188 943 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 KIAA0319Q5VV43 1072 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 TSHZ3Q63HK5 1081 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 GALNT5Q7Z7M9 940 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 ZNF483Q8TF39 744 aaPredicted RBP7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 ERCC4Q92889 916 aaPredicted RBP7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 CNKSR1Q969H4 720 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 CDHR1Q96JP9 859 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 CCDC138Q96M89 665 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 SLC4A9Q96Q91 983 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 HHIPQ96QV1 700 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 SH3GL3Q99963 347 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 PARD6BQ9BYG5 372 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 PUS7LQ9H0K6 701 aaKnown RBP7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 RTEL1Q9NZ71 1219 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 TMCC3Q9ULS5 477 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 ACEP12821 1306 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 USP6P35125 1406 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 DLG5Q8TDM6 1919 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 STRCQ7RTU9 1775 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 IL2RAP01589 272 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 MTHFD1P11586 935 aaKnown RBP7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 SYT1P21579 422 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 ICA1Q05084 483 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 SMAD1Q15797 465 aaKnown RBP7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 CLUL1Q15846 466 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 CAMK4Q16566 473 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 FAM98CQ17RN3 349 aaKnown RBP7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 PREPLQ4J6C6 727 aaPredicted RBP7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 GPR158Q5T848 1215 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 VPS53Q5VIR6 699 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 GPR155Q7Z3F1 870 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 MYLK4Q86YV6 388 aaPredicted RBP7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 ZBTB34Q8NCN2 500 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 RABGGTAQ92696 567 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 MYLK2Q9H1R3 596 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 EPC1Q9H2F5 836 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 USP16Q9Y5T5 823 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 CHD2O14647 1828 aaKnown RBP7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 COQ9O75208 318 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 RTN2O75298 545 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 POLR2BP30876 1174 aaKnown RBP7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 TAF5Q15542 800 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 CCDC149Q6ZUS6 474 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 HDXQ7Z353 690 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 CNNM3Q8NE01 707 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 CCDC26Q8TAB7 109 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 CABS1Q96KC9 395 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 ITM2CQ9NQX7 267 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 C14orf119Q9NWQ9 140 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 SNX5Q9Y5X3 404 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 OVOS2A0A0J9YW53 1432 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 OVOS2Q6IE36 1432 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 SSH2Q76I76 1423 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 ANKRD18BA2A2Z9 1011 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 FAM221AA4D161 298 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 CCP110O43303 1012 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 GNAI3P08754 354 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 ACRP10323 421 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 RDXP35241 583 aaKnown RBP7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 IDH3AP50213 366 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 RBM5P52756 815 aaKnown RBP eCLIP7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 RWDD2BP57060 319 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 SNX16P57768 344 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 ASIC2Q16515 512 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 ANO4Q32M45 955 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 SV2CQ496J9 727 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 PLD6Q8N2A8 252 aaKnown RBP7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 FAM71BQ8TC56 605 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 SCLYQ96I15 445 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 TRIM39Q9HCM9 518 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 IMPACTQ9P2X3 320 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 ITGB1BP2Q9UKP3 347 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 RABL2BQ9UNT1 228 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 TTC21AQ8NDW8 1320 aa7.48□□□□□ -1.21
TSPAN3-209ENST00000560715 FMN2Q9NZ56 1722 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 GOLGA6L19H0YKK7 550 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 PLD2O14939 933 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 CHUKO15111 745 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 KPNA5O15131 536 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 AHCYL1O43865 530 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 URI1O94763 535 aaPredicted RBP7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 RHCEP18577 417 aa7.47□□□□□ -1.21
TSPAN3-209ENST00000560715 FBLN1P23142 703 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms