RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 PCDHA6Q9UN73 950 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 PCDHA8Q9Y5H6 950 aa9.15□□□□□ -0.94
LRRC28-219ENST00000560483 KIAA1217Q5T5P2 1943 aa9.15□□□□□ -0.95
LRRC28-219ENST00000560483 TNRC18O15417 2968 aaPredicted RBP9.15□□□□□ -0.95
LRRC28-219ENST00000560483 MOXD2PA6NHM9 499 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 H0YGN5 161 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 ADCY6O43306 1168 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 ADAMTS4O75173 837 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 DEXIO95424 95 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 GH1P01241 217 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 IGHA2P01877 340 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 OATP04181 439 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 PRKCSHP14314 528 aaPredicted RBP9.14□□□□□ -0.95
LRRC28-219ENST00000560483 IFNAR1P17181 557 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 GJA9P57773 515 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 SCRN1Q12765 414 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 LRRC26Q2I0M4 334 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 CTC1Q2NKJ3 1217 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 TRIM60Q495X7 471 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 TMEM63BQ5T3F8 832 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 KCNV1Q6PIU1 500 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 CXCL17Q6UXB2 119 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 REXO1Q8N1G1 1221 aaKnown RBP9.14□□□□□ -0.95
LRRC28-219ENST00000560483 FBXL16Q8N461 479 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 NECAB1Q8N987 351 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 IL31RAQ8NI17 732 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 BICD2Q8TD16 824 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 MORC4Q8TE76 937 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 LBHD1Q9BQE6 289 aaPredicted RBP9.14□□□□□ -0.95
LRRC28-219ENST00000560483 TSEN34Q9BSV6 310 aaKnown RBP9.14□□□□□ -0.95
LRRC28-219ENST00000560483 AGXT2Q9BYV1 514 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 KATNBL1Q9H079 304 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 RIC8AQ9NPQ8 531 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 FAM217BQ9NTX9 383 aaPredicted RBP9.14□□□□□ -0.95
LRRC28-219ENST00000560483 POLR3EQ9NVU0 708 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 TMEM260Q9NX78 707 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 TCEAL9Q9UHQ7 104 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 LRRC37A2A6NM11 1700 aa9.14□□□□□ -0.95
LRRC28-219ENST00000560483 A0A0U1RQG5 324 aaPredicted RBP9.13□□□□□ -0.95
LRRC28-219ENST00000560483 TTC24A2A3L6 582 aaPredicted RBP9.13□□□□□ -0.95
LRRC28-219ENST00000560483 DCDC2CA8MYV0 355 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 PIK3CDO00329 1044 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 MEIS2O14770 477 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 TLR3O15455 904 aaKnown RBP9.13□□□□□ -0.95
LRRC28-219ENST00000560483 DTNBO60941 627 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 ARIH2O95376 493 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 CD2BP2O95400 341 aaKnown RBP9.13□□□□□ -0.95
LRRC28-219ENST00000560483 GGPS1O95749 300 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 FOSP01100 380 aaPredicted RBP9.13□□□□□ -0.95
LRRC28-219ENST00000560483 EDNRBP24530 442 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 TRIM29Q14134 588 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 PRPF38BQ5VTL8 546 aaKnown RBP9.13□□□□□ -0.95
LRRC28-219ENST00000560483 SLC39A5Q6ZMH5 540 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 VSIG10LQ86VR7 867 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 AFG1LQ8WV93 481 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 WASF1Q92558 559 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 HPS1Q92902 700 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 MRGPRX2Q96LB1 330 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 SPATA33Q96N06 139 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 ANO3Q9BYT9 981 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 STK17AQ9UEE5 414 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 PHF24Q9UPV7 400 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 GNEQ9Y223 722 aaKnown RBP9.13□□□□□ -0.95
LRRC28-219ENST00000560483 NOD1Q9Y239 953 aa9.13□□□□□ -0.95
LRRC28-219ENST00000560483 MROH7Q68CQ1 1323 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 WNT7AO00755 349 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 FIBPO43427 364 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 PFKFB2O60825 505 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 STAM2O75886 525 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 CABYRO75952 493 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 GCGRP47871 477 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 PSMC6P62333 389 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 AP3B2Q13367 1082 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 MTMR1Q13613 665 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 LAMC2Q13753 1193 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 GNL2Q13823 731 aaKnown RBP9.12□□□□□ -0.95
LRRC28-219ENST00000560483 RABEP1Q15276 862 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 ME3Q16798 604 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 PCNX4Q63HM2 1172 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 CYFIP1Q7L576 1253 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 UBE2Q1Q7Z7E8 422 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 CCDC83Q8IWF9 413 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 FAM184AQ8NB25 1140 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 KLHDC9Q8NEP7 349 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 RASGRP4Q8TDF6 673 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 CDHR1Q96JP9 859 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 MTG1Q9BT17 334 aaPredicted RBP9.12□□□□□ -0.95
LRRC28-219ENST00000560483 UPF3AQ9H1J1 476 aaKnown RBP9.12□□□□□ -0.95
LRRC28-219ENST00000560483 BRMS1Q9HCU9 246 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 TMEM39AQ9NV64 488 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 ORC3Q9UBD5 711 aaPredicted RBP9.12□□□□□ -0.95
LRRC28-219ENST00000560483 DDX41Q9UJV9 622 aaKnown RBP9.12□□□□□ -0.95
LRRC28-219ENST00000560483 LIMCH1Q9UPQ0 1083 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 Q9Y3F1 56 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 NID2Q14112 1375 aa9.12□□□□□ -0.95
LRRC28-219ENST00000560483 ALPK3Q96L96 1907 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 RBM47A0AV96 593 aaKnown RBP9.11□□□□□ -0.95
LRRC28-219ENST00000560483 DDX39AO00148 427 aaKnown RBP9.11□□□□□ -0.95
LRRC28-219ENST00000560483 MARCH6O60337 910 aa9.11□□□□□ -0.95
LRRC28-219ENST00000560483 CLTBP09497 229 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms