RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 WDR24Q96S15 920 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 GTPBP4Q9BZE4 634 aaKnown RBP15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 TFR2Q9UP52 801 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 CENPFP49454 3210 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 DDNO94850 711 aaPredicted RBP15.63■□□□□ 0.09
CARMIL3-203ENST00000560349 TPM1P09493 284 aa15.63■□□□□ 0.09
CARMIL3-203ENST00000560349 TRIM21P19474 475 aaKnown RBP15.63■□□□□ 0.09
CARMIL3-203ENST00000560349 TRIM65Q6PJ69 517 aa15.63■□□□□ 0.09
CARMIL3-203ENST00000560349 SFR1Q86XK3 245 aa15.63■□□□□ 0.09
CARMIL3-203ENST00000560349 CNGA4Q8IV77 575 aa15.63■□□□□ 0.09
CARMIL3-203ENST00000560349 BANK1Q8NDB2 785 aa15.63■□□□□ 0.09
CARMIL3-203ENST00000560349 DDX41Q9UJV9 622 aaKnown RBP15.63■□□□□ 0.09
CARMIL3-203ENST00000560349 RASSF10A6NK89 507 aa15.63■□□□□ 0.09
CARMIL3-203ENST00000560349 TRAF5O00463 557 aa15.63■□□□□ 0.09
CARMIL3-203ENST00000560349 TBX3O15119 743 aa15.63■□□□□ 0.09
CARMIL3-203ENST00000560349 KCNJ6P48051 423 aa15.63■□□□□ 0.09
CARMIL3-203ENST00000560349 LRRC55Q6ZSA7 311 aa15.63■□□□□ 0.09
CARMIL3-203ENST00000560349 CCDC65Q8IXS2 484 aa15.63■□□□□ 0.09
CARMIL3-203ENST00000560349 SCFD1Q8WVM8 642 aa15.63■□□□□ 0.09
CARMIL3-203ENST00000560349 UNC45AQ9H3U1 944 aa15.63■□□□□ 0.09
CARMIL3-203ENST00000560349 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.63■□□□□ 0.09
CARMIL3-203ENST00000560349 ITIH6Q6UXX5 1313 aa15.63■□□□□ 0.09
CARMIL3-203ENST00000560349 EPHB6O15197 1021 aa15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 PSMD10O75832 226 aa15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 RPS6P62753 249 aaKnown RBP15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 KCNA1Q09470 495 aa15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 GIT2Q14161 759 aa15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 SLC38A10Q9HBR0 1119 aa15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 FAM207AQ9NSI2 230 aaPredicted RBP15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 GPRC5DQ9NZD1 345 aa15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 CTDP1Q9Y5B0 961 aaPredicted RBP15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 PCDHA2Q9Y5H9 948 aa15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 LTBP3Q9NS15 1303 aa15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 IPO5O00410 1097 aaKnown RBP15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 SLITRK3O94933 977 aa15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 MYBP10242 640 aa15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 MYCLP12524 364 aaPredicted RBP15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 PTPRAP18433 802 aa15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 GNG11P61952 73 aa15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 APBA1Q02410 837 aa15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 MAEAQ7L5Y9 396 aa15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 KSR1Q8IVT5 923 aa15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 UPF1Q92900 1129 aaKnown RBP eCLIP15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 TAAR1Q96RJ0 339 aa15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 PICK1Q9NRD5 415 aa15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 RABGAP1Q9Y3P9 1069 aa15.62■□□□□ 0.09
CARMIL3-203ENST00000560349 SORBS3O60504 671 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 PRPF6O94906 941 aaKnown RBP15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 ETF1P62495 437 aaKnown RBP15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 SMCR8Q8TEV9 937 aaPredicted RBP15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 CNKSR2Q8WXI2 1034 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 LPAR1Q92633 364 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 ERO1AQ96HE7 468 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 FHDC1Q9C0D6 1143 aaPredicted RBP15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 LRRC27Q9C0I9 530 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 PPP1R9AQ9ULJ8 1098 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 ZSCAN12O43309 604 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 MCTP2Q6DN12 878 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 SCYL3Q8IZE3 742 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 TMEM51Q9NW97 253 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 ADGRG1Q9Y653 693 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 TMEM150BA6NC51 233 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 PLA2G6O60733 806 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 SLU7O95391 586 aaKnown RBP15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 DNM2P50570 870 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 HSD17B4P51659 736 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 BACE1P56817 501 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 ELF2Q15723 593 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 SYT2Q8N9I0 419 aaPredicted RBP15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 NOC3LQ8WTT2 800 aaKnown RBP15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 HSD17B14Q9BPX1 270 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 KCNH7Q9NS40 1196 aa15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 LUC7L2Q9Y383 392 aaKnown RBP15.61■□□□□ 0.09
CARMIL3-203ENST00000560349 MRPS9P82933 396 aaKnown RBP15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 FAM114A1Q8IWE2 563 aa15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 PLCD3Q8N3E9 789 aa15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 ZNF280CQ8ND82 737 aa15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 SYTL5Q8TDW5 730 aaPredicted RBP15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 SLC5A5Q92911 643 aa15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 TRERF1Q96PN7 1200 aa15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 CRACR2AQ9BSW2 395 aa15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 NDST4Q9H3R1 872 aa15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 POLR2AP24928 1970 aaKnown RBP15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 KIF2AO00139 706 aaPredicted RBP15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 VWA5AO00534 786 aa15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 CCDC175P0C221 793 aa15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 TRAF1Q13077 416 aa15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 PLS1Q14651 629 aa15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 CCDC40Q4G0X9 1142 aa15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 ZCWPW2Q504Y3 356 aa15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 DCAF15Q66K64 600 aa15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 ZNF397Q8NF99 534 aaPredicted RBP15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 MMRN2Q9H8L6 949 aa15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 TRIM10Q9UDY6 481 aa15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 SAMM50Q9Y512 469 aa15.6■□□□□ 0.09
CARMIL3-203ENST00000560349 URI1O94763 535 aaPredicted RBP15.59■□□□□ 0.09
CARMIL3-203ENST00000560349 LRRC63Q05C16 580 aa15.59■□□□□ 0.09
CARMIL3-203ENST00000560349 VWA3BQ502W6 1294 aa15.59■□□□□ 0.09
CARMIL3-203ENST00000560349 FBXO38Q6PIJ6 1188 aa15.59■□□□□ 0.09
CARMIL3-203ENST00000560349 TSG101Q99816 390 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms