RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 MTDHQ86UE4 582 aaKnown RBP7.12□□□□□ -1.27
CRNDE-208ENST00000560029 TTC9BQ8N6N2 239 aa7.12□□□□□ -1.27
CRNDE-208ENST00000560029 GSTCDQ8NEC7 633 aa7.12□□□□□ -1.27
CRNDE-208ENST00000560029 DVL3Q92997 716 aaPredicted RBP7.12□□□□□ -1.27
CRNDE-208ENST00000560029 C11orf84Q9BUA3 381 aaPredicted RBP7.12□□□□□ -1.27
CRNDE-208ENST00000560029 MRIQ9BWK5 157 aa7.12□□□□□ -1.27
CRNDE-208ENST00000560029 SSBP3Q9BWW4 388 aaPredicted RBP7.12□□□□□ -1.27
CRNDE-208ENST00000560029 MARCH2Q9P0N8 246 aa7.12□□□□□ -1.27
CRNDE-208ENST00000560029 PCDHA9Q9Y5H5 950 aa7.12□□□□□ -1.27
CRNDE-208ENST00000560029 PCDHA8Q9Y5H6 950 aa7.12□□□□□ -1.27
CRNDE-208ENST00000560029 AQP7O14520 342 aa7.11□□□□□ -1.27
CRNDE-208ENST00000560029 EFCAB14O75071 495 aa7.11□□□□□ -1.27
CRNDE-208ENST00000560029 RASGRP1O95267 797 aa7.11□□□□□ -1.27
CRNDE-208ENST00000560029 CRTAMO95727 393 aa7.11□□□□□ -1.27
CRNDE-208ENST00000560029 FUCA1P04066 466 aa7.11□□□□□ -1.27
CRNDE-208ENST00000560029 TACR2P21452 398 aa7.11□□□□□ -1.27
CRNDE-208ENST00000560029 THBS2P35442 1172 aa7.11□□□□□ -1.27
CRNDE-208ENST00000560029 GUCY1A3Q02108 690 aa7.11□□□□□ -1.27
CRNDE-208ENST00000560029 DALRD3Q5D0E6 543 aaKnown RBP7.11□□□□□ -1.27
CRNDE-208ENST00000560029 WWC2Q6AWC2 1192 aa7.11□□□□□ -1.27
CRNDE-208ENST00000560029 GLB1LQ6UWU2 654 aa7.11□□□□□ -1.27
CRNDE-208ENST00000560029 CEP68Q76N32 757 aa7.11□□□□□ -1.27
CRNDE-208ENST00000560029 TEX2Q8IWB9 1127 aa7.11□□□□□ -1.27
CRNDE-208ENST00000560029 DHX37Q8IY37 1157 aaKnown RBP7.11□□□□□ -1.27
CRNDE-208ENST00000560029 LGI4Q8N135 537 aa7.11□□□□□ -1.27
CRNDE-208ENST00000560029 NETO2Q8NC67 525 aa7.11□□□□□ -1.27
CRNDE-208ENST00000560029 SCLYQ96I15 445 aa7.11□□□□□ -1.27
CRNDE-208ENST00000560029 ZFYVE21Q9BQ24 234 aa7.11□□□□□ -1.27
CRNDE-208ENST00000560029 TRIM39Q9HCM9 518 aa7.11□□□□□ -1.27
CRNDE-208ENST00000560029 PPARGC1AQ9UBK2 798 aaKnown RBP7.11□□□□□ -1.27
CRNDE-208ENST00000560029 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.11□□□□□ -1.27
CRNDE-208ENST00000560029 MROH6A6NGR9 719 aa7.1□□□□□ -1.27
CRNDE-208ENST00000560029 DDX3XO00571 662 aaKnown RBP eCLIP7.1□□□□□ -1.27
CRNDE-208ENST00000560029 RFPL3O75679 317 aa7.1□□□□□ -1.27
CRNDE-208ENST00000560029 SDSP20132 328 aa7.1□□□□□ -1.27
CRNDE-208ENST00000560029 FPR2P25090 351 aa7.1□□□□□ -1.27
CRNDE-208ENST00000560029 RPL13P26373 211 aaKnown RBP7.1□□□□□ -1.27
CRNDE-208ENST00000560029 GDF5P43026 501 aa7.1□□□□□ -1.27
CRNDE-208ENST00000560029 KIAA2012Q0VF49 1180 aa7.1□□□□□ -1.27
CRNDE-208ENST00000560029 LSAMPQ13449 338 aa7.1□□□□□ -1.27
CRNDE-208ENST00000560029 NLRP10Q86W26 655 aa7.1□□□□□ -1.27
CRNDE-208ENST00000560029 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.1□□□□□ -1.27
CRNDE-208ENST00000560029 NINJ1Q92982 152 aa7.1□□□□□ -1.27
CRNDE-208ENST00000560029 SLKQ9H2G2 1235 aaPredicted RBP7.1□□□□□ -1.27
CRNDE-208ENST00000560029 CLDND1Q9NY35 253 aa7.1□□□□□ -1.27
CRNDE-208ENST00000560029 SBNO2Q9Y2G9 1366 aa7.09□□□□□ -1.27
CRNDE-208ENST00000560029 KCNQ2O43526 872 aa7.09□□□□□ -1.27
CRNDE-208ENST00000560029 ZBTB7AO95365 584 aa7.09□□□□□ -1.27
CRNDE-208ENST00000560029 GTF2A2P52657 109 aa7.09□□□□□ -1.27
CRNDE-208ENST00000560029 CDSNQ15517 529 aa7.09□□□□□ -1.27
CRNDE-208ENST00000560029 CD300LDQ6UXZ3 194 aa7.09□□□□□ -1.27
CRNDE-208ENST00000560029 NIM1KQ8IY84 436 aa7.09□□□□□ -1.27
CRNDE-208ENST00000560029 TXNDC5Q8NBS9 432 aaKnown RBP7.09□□□□□ -1.27
CRNDE-208ENST00000560029 TMEM169Q96HH4 297 aa7.09□□□□□ -1.27
CRNDE-208ENST00000560029 MAGEB10Q96LZ2 347 aaPredicted RBP7.09□□□□□ -1.27
CRNDE-208ENST00000560029 MENTQ9BUN1 341 aa7.09□□□□□ -1.27
CRNDE-208ENST00000560029 C22orf46C9J442 243 aa7.08□□□□□ -1.28
CRNDE-208ENST00000560029 DNAJC8O75937 253 aaPredicted RBP7.08□□□□□ -1.28
CRNDE-208ENST00000560029 ICAM4Q14773 271 aa7.08□□□□□ -1.28
CRNDE-208ENST00000560029 KIZQ2M2Z5 673 aa7.08□□□□□ -1.28
CRNDE-208ENST00000560029 PLEKHO2Q8TD55 490 aa7.08□□□□□ -1.28
CRNDE-208ENST00000560029 TRMT2BQ96GJ1 504 aaKnown RBP7.08□□□□□ -1.28
CRNDE-208ENST00000560029 ALG1Q9BT22 464 aa7.08□□□□□ -1.28
CRNDE-208ENST00000560029 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.08□□□□□ -1.28
CRNDE-208ENST00000560029 PLAAQ9Y263 795 aa7.08□□□□□ -1.28
CRNDE-208ENST00000560029 TCRBV16S1A1N1A0A5B0 115 aa7.07□□□□□ -1.28
CRNDE-208ENST00000560029 SOD2P04179 222 aa7.07□□□□□ -1.28
CRNDE-208ENST00000560029 SRGAP2CP0DJJ0 459 aa7.07□□□□□ -1.28
CRNDE-208ENST00000560029 GRK2P25098 689 aa7.07□□□□□ -1.28
CRNDE-208ENST00000560029 GRK3P35626 688 aa7.07□□□□□ -1.28
CRNDE-208ENST00000560029 BORAQ6PGQ7 559 aa7.07□□□□□ -1.28
CRNDE-208ENST00000560029 FAM124AQ86V42 546 aa7.07□□□□□ -1.28
CRNDE-208ENST00000560029 KYQ8NBH2 561 aa7.07□□□□□ -1.28
CRNDE-208ENST00000560029 KCNJ15Q99712 375 aa7.07□□□□□ -1.28
CRNDE-208ENST00000560029 JAM3Q9BX67 310 aa7.07□□□□□ -1.28
CRNDE-208ENST00000560029 CDIP1Q9H305 208 aa7.07□□□□□ -1.28
CRNDE-208ENST00000560029 IPPKQ9H8X2 491 aa7.07□□□□□ -1.28
CRNDE-208ENST00000560029 TNPO3Q9Y5L0 923 aaKnown RBP7.07□□□□□ -1.28
CRNDE-208ENST00000560029 H7BY64 318 aa7.06□□□□□ -1.28
CRNDE-208ENST00000560029 ARVCFO00192 962 aa7.06□□□□□ -1.28
CRNDE-208ENST00000560029 OPA1O60313 960 aa7.06□□□□□ -1.28
CRNDE-208ENST00000560029 AMHP03971 560 aa7.06□□□□□ -1.28
CRNDE-208ENST00000560029 NAT1P18440 290 aa7.06□□□□□ -1.28
CRNDE-208ENST00000560029 ACVRL1P37023 503 aa7.06□□□□□ -1.28
CRNDE-208ENST00000560029 PAK1Q13153 545 aa7.06□□□□□ -1.28
CRNDE-208ENST00000560029 ZNF460Q14592 562 aa7.06□□□□□ -1.28
CRNDE-208ENST00000560029 TAF7LQ5H9L4 462 aa7.06□□□□□ -1.28
CRNDE-208ENST00000560029 CRIP3Q6Q6R5 217 aa7.06□□□□□ -1.28
CRNDE-208ENST00000560029 ETV3LQ6ZN32 361 aa7.06□□□□□ -1.28
CRNDE-208ENST00000560029 ZC3H7AQ8IWR0 971 aaKnown RBP7.06□□□□□ -1.28
CRNDE-208ENST00000560029 PCDH19Q8TAB3 1148 aa7.06□□□□□ -1.28
CRNDE-208ENST00000560029 MFSD3Q96ES6 412 aa7.06□□□□□ -1.28
CRNDE-208ENST00000560029 PPP4R1LQ9P1A2 415 aa7.06□□□□□ -1.28
CRNDE-208ENST00000560029 B4GALT3O60512 393 aa7.05□□□□□ -1.28
CRNDE-208ENST00000560029 APPP05067 770 aa7.05□□□□□ -1.28
CRNDE-208ENST00000560029 KRTAP1-1Q07627 177 aa7.05□□□□□ -1.28
CRNDE-208ENST00000560029 TM4SF20Q53R12 229 aa7.05□□□□□ -1.28
CRNDE-208ENST00000560029 FAM26FQ5R3K3 315 aa7.05□□□□□ -1.28
CRNDE-208ENST00000560029 CNNM4Q6P4Q7 775 aa7.05□□□□□ -1.28
CRNDE-208ENST00000560029 PALM2Q8IXS6 379 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms