RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 DCDC2CA8MYV0 355 aa22.12■■□□□ 1.13
SHF-205ENST00000559566 GDF6Q6KF10 455 aaPredicted RBP22.12■■□□□ 1.13
SHF-205ENST00000559566 NFRKBQ6P4R8 1299 aa22.12■■□□□ 1.13
SHF-205ENST00000559566 MOXD1Q6UVY6 613 aa22.12■■□□□ 1.13
SHF-205ENST00000559566 ETNPPLQ8TBG4 499 aa22.12■■□□□ 1.13
SHF-205ENST00000559566 HDAC6Q9UBN7 1215 aa22.12■■□□□ 1.13
SHF-205ENST00000559566 MROH7Q68CQ1 1323 aa22.11■■□□□ 1.13
SHF-205ENST00000559566 H3BRB1 525 aa22.11■■□□□ 1.13
SHF-205ENST00000559566 KIAA0355O15063 1070 aa22.11■■□□□ 1.13
SHF-205ENST00000559566 SLC5A5Q92911 643 aa22.11■■□□□ 1.13
SHF-205ENST00000559566 TUT1Q9H6E5 874 aaKnown RBP22.11■■□□□ 1.13
SHF-205ENST00000559566 TMEM39AQ9NV64 488 aa22.11■■□□□ 1.13
SHF-205ENST00000559566 DDX25Q9UHL0 483 aaKnown RBP22.11■■□□□ 1.13
SHF-205ENST00000559566 SMC3Q9UQE7 1217 aa22.11■■□□□ 1.13
SHF-205ENST00000559566 UMODL1Q5DID0 1318 aa22.1■■□□□ 1.13
SHF-205ENST00000559566 LGR5O75473 907 aa22.1■■□□□ 1.13
SHF-205ENST00000559566 ATG7O95352 703 aa22.1■■□□□ 1.13
SHF-205ENST00000559566 CYP2C9P11712 490 aa22.1■■□□□ 1.13
SHF-205ENST00000559566 MAGEA10P43363 369 aaPredicted RBP22.1■■□□□ 1.13
SHF-205ENST00000559566 ZNF200P98182 395 aaPredicted RBP22.1■■□□□ 1.13
SHF-205ENST00000559566 SESTD1Q86VW0 696 aa22.1■■□□□ 1.13
SHF-205ENST00000559566 SNX21Q969T3 373 aa22.1■■□□□ 1.13
SHF-205ENST00000559566 K7ELQ4 463 aaPredicted RBP22.09■■□□□ 1.13
SHF-205ENST00000559566 CCNT1O60563 726 aaKnown RBP22.09■■□□□ 1.13
SHF-205ENST00000559566 MARK3P27448 753 aa22.09■■□□□ 1.13
SHF-205ENST00000559566 MDM2Q00987 491 aaPredicted RBP22.09■■□□□ 1.13
SHF-205ENST00000559566 SAFBQ15424 915 aaKnown RBP eCLIP22.09■■□□□ 1.13
SHF-205ENST00000559566 PPP4R3AQ6IN85 833 aa22.09■■□□□ 1.13
SHF-205ENST00000559566 ABHD15Q6UXT9 468 aa22.09■■□□□ 1.13
SHF-205ENST00000559566 POTEDQ86YR6 584 aa22.09■■□□□ 1.13
SHF-205ENST00000559566 KATNAL1Q9BW62 490 aa22.09■■□□□ 1.13
SHF-205ENST00000559566 RNPEPQ9H4A4 650 aa22.09■■□□□ 1.13
SHF-205ENST00000559566 KCNMB3Q9NPA1 279 aa22.09■■□□□ 1.13
SHF-205ENST00000559566 GTF2IRD1Q9UHL9 959 aa22.09■■□□□ 1.13
SHF-205ENST00000559566 IGKV6D-21A0A0A0MT36 114 aa22.08■■□□□ 1.13
SHF-205ENST00000559566 TLR3O15455 904 aaKnown RBP22.08■■□□□ 1.13
SHF-205ENST00000559566 PSMD10O75832 226 aa22.08■■□□□ 1.13
SHF-205ENST00000559566 SMIM10L2AP0DMW4 78 aa22.08■■□□□ 1.13
SHF-205ENST00000559566 SMIM10L2BP0DMW5 78 aa22.08■■□□□ 1.13
SHF-205ENST00000559566 PTPN11Q06124 597 aaPredicted RBP22.08■■□□□ 1.13
SHF-205ENST00000559566 CHRDL2Q6WN34 429 aa22.08■■□□□ 1.13
SHF-205ENST00000559566 HAS1Q92839 578 aa22.08■■□□□ 1.13
SHF-205ENST00000559566 BADQ92934 168 aa22.08■■□□□ 1.13
SHF-205ENST00000559566 GDF15Q99988 308 aa22.08■■□□□ 1.13
SHF-205ENST00000559566 SEZ6LQ9BYH1 1024 aa22.08■■□□□ 1.13
SHF-205ENST00000559566 PPP1R12CQ9BZL4 782 aa22.08■■□□□ 1.13
SHF-205ENST00000559566 FOXP1Q9H334 677 aaPredicted RBP22.08■■□□□ 1.13
SHF-205ENST00000559566 PRO3102Q9H379 93 aa22.08■■□□□ 1.13
SHF-205ENST00000559566 UNC45AQ9H3U1 944 aa22.08■■□□□ 1.13
SHF-205ENST00000559566 TBC1D22BQ9NU19 505 aa22.08■■□□□ 1.13
SHF-205ENST00000559566 FOXD4L1Q9NU39 408 aa22.08■■□□□ 1.13
SHF-205ENST00000559566 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.08■■□□□ 1.13
SHF-205ENST00000559566 LTBP2Q14767 1821 aa22.08■■□□□ 1.12
SHF-205ENST00000559566 EMSYQ7Z589 1322 aa22.07■■□□□ 1.12
SHF-205ENST00000559566 SUPT20HL2P0C7V6 817 aa22.07■■□□□ 1.12
SHF-205ENST00000559566 HOXC8P31273 242 aa22.07■■□□□ 1.12
SHF-205ENST00000559566 LRCH2Q5VUJ6 765 aa22.07■■□□□ 1.12
SHF-205ENST00000559566 B3GNT9Q6UX72 402 aa22.07■■□□□ 1.12
SHF-205ENST00000559566 CCDC60Q8IWA6 550 aaPredicted RBP22.07■■□□□ 1.12
SHF-205ENST00000559566 C7orf31Q8N865 590 aa22.07■■□□□ 1.12
SHF-205ENST00000559566 DHX38Q92620 1227 aaKnown RBP22.07■■□□□ 1.12
SHF-205ENST00000559566 WNT8BQ93098 351 aa22.07■■□□□ 1.12
SHF-205ENST00000559566 NOC4LQ9BVI4 516 aaKnown RBP22.07■■□□□ 1.12
SHF-205ENST00000559566 CHMP2AO43633 222 aa22.06■■□□□ 1.12
SHF-205ENST00000559566 GCFC2P16383 781 aaKnown RBP22.06■■□□□ 1.12
SHF-205ENST00000559566 ATP2B1P20020 1258 aa22.06■■□□□ 1.12
SHF-205ENST00000559566 U2AF2P26368 475 aaKnown RBP eCLIP22.06■■□□□ 1.12
SHF-205ENST00000559566 CYP2C18P33260 490 aa22.06■■□□□ 1.12
SHF-205ENST00000559566 ZNF746Q6NUN9 644 aaPredicted RBP22.06■■□□□ 1.12
SHF-205ENST00000559566 NOSTRINQ8IVI9 506 aa22.06■■□□□ 1.12
SHF-205ENST00000559566 GLG1Q92896 1179 aa22.06■■□□□ 1.12
SHF-205ENST00000559566 RIT2Q99578 217 aa22.06■■□□□ 1.12
SHF-205ENST00000559566 PRKAG2Q9UGJ0 569 aa22.06■■□□□ 1.12
SHF-205ENST00000559566 COLQQ9Y215 455 aaPredicted RBP22.06■■□□□ 1.12
SHF-205ENST00000559566 GAS7O60861 476 aa22.05■■□□□ 1.12
SHF-205ENST00000559566 ATP4AP20648 1035 aa22.05■■□□□ 1.12
SHF-205ENST00000559566 EPHB4P54760 987 aa22.05■■□□□ 1.12
SHF-205ENST00000559566 KRT76Q01546 638 aa22.05■■□□□ 1.12
SHF-205ENST00000559566 NBR1Q14596 966 aa22.05■■□□□ 1.12
SHF-205ENST00000559566 PTGISQ16647 500 aa22.05■■□□□ 1.12
SHF-205ENST00000559566 TEKT3Q9BXF9 490 aa22.05■■□□□ 1.12
SHF-205ENST00000559566 WNT8AQ9H1J5 351 aa22.05■■□□□ 1.12
SHF-205ENST00000559566 TMEM60Q9H2L4 133 aa22.05■■□□□ 1.12
SHF-205ENST00000559566 SMARCAD1Q9H4L7 1026 aa22.05■■□□□ 1.12
SHF-205ENST00000559566 SETD4Q9NVD3 440 aa22.05■■□□□ 1.12
SHF-205ENST00000559566 VAV3Q9UKW4 847 aa22.05■■□□□ 1.12
SHF-205ENST00000559566 ZNF215Q9UL58 517 aaPredicted RBP22.05■■□□□ 1.12
SHF-205ENST00000559566 TIMP1P01033 207 aa22.04■■□□□ 1.12
SHF-205ENST00000559566 RAG1P15918 1043 aa22.04■■□□□ 1.12
SHF-205ENST00000559566 TOB1P50616 345 aaPredicted RBP22.04■■□□□ 1.12
SHF-205ENST00000559566 PLCB4Q15147 1175 aa22.04■■□□□ 1.12
SHF-205ENST00000559566 UGCGQ16739 394 aa22.04■■□□□ 1.12
SHF-205ENST00000559566 SWSAP1Q6NVH7 229 aa22.04■■□□□ 1.12
SHF-205ENST00000559566 ZBTB10Q96DT7 871 aa22.04■■□□□ 1.12
SHF-205ENST00000559566 HIPK3Q9H422 1215 aa22.04■■□□□ 1.12
SHF-205ENST00000559566 ERAP1Q9NZ08 941 aa22.04■■□□□ 1.12
SHF-205ENST00000559566 KIF3AQ9Y496 699 aa22.04■■□□□ 1.12
SHF-205ENST00000559566 EML1O00423 815 aa22.03■■□□□ 1.12
SHF-205ENST00000559566 TREHO43280 583 aa22.03■■□□□ 1.12
SHF-205ENST00000559566 STAT5BP51692 787 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms