RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 CCDC12Q8WUD4 166 aaPredicted RBP20.29■□□□□ 0.84
TPM1-218ENST00000559281 GLG1Q92896 1179 aa20.29■□□□□ 0.84
TPM1-218ENST00000559281 SDF4Q9BRK5 362 aa20.29■□□□□ 0.84
TPM1-218ENST00000559281 KCNH7Q9NS40 1196 aa20.29■□□□□ 0.84
TPM1-218ENST00000559281 ERAP1Q9NZ08 941 aa20.29■□□□□ 0.84
TPM1-218ENST00000559281 PKD2L1Q9P0L9 805 aa20.29■□□□□ 0.84
TPM1-218ENST00000559281 SCG2P13521 617 aa20.28■□□□□ 0.84
TPM1-218ENST00000559281 ZNF76P36508 570 aa20.28■□□□□ 0.84
TPM1-218ENST00000559281 ARHGAP4P98171 946 aa20.28■□□□□ 0.84
TPM1-218ENST00000559281 CEP55Q53EZ4 464 aa20.28■□□□□ 0.84
TPM1-218ENST00000559281 PPM1EQ8WY54 764 aa20.28■□□□□ 0.84
TPM1-218ENST00000559281 ANO3Q9BYT9 981 aa20.28■□□□□ 0.84
TPM1-218ENST00000559281 AZI2Q9H6S1 392 aa20.28■□□□□ 0.84
TPM1-218ENST00000559281 JPH1Q9HDC5 661 aaPredicted RBP20.28■□□□□ 0.84
TPM1-218ENST00000559281 A0A0C4DFX4 3053 aa20.28■□□□□ 0.84
TPM1-218ENST00000559281 GSTTP1A0A1W2PQM5 241 aa20.27■□□□□ 0.84
TPM1-218ENST00000559281 ADGRE1Q14246 886 aa20.27■□□□□ 0.84
TPM1-218ENST00000559281 MBTPS1Q14703 1052 aa20.27■□□□□ 0.84
TPM1-218ENST00000559281 TAF2Q6P1X5 1199 aa20.27■□□□□ 0.84
TPM1-218ENST00000559281 AGXT2Q9BYV1 514 aa20.27■□□□□ 0.84
TPM1-218ENST00000559281 C6orf50Q9HD87 102 aa20.27■□□□□ 0.84
TPM1-218ENST00000559281 SLC9A2Q9UBY0 812 aa20.27■□□□□ 0.84
TPM1-218ENST00000559281 TELO2Q9Y4R8 837 aa20.27■□□□□ 0.84
TPM1-218ENST00000559281 MYH7BA7E2Y1 1941 aa20.26■□□□□ 0.83
TPM1-218ENST00000559281 PRPF3O43395 683 aaKnown RBP20.26■□□□□ 0.83
TPM1-218ENST00000559281 GNA11P29992 359 aa20.26■□□□□ 0.83
TPM1-218ENST00000559281 SREBF1P36956 1147 aa20.26■□□□□ 0.83
TPM1-218ENST00000559281 ADAM17P78536 824 aa20.26■□□□□ 0.83
TPM1-218ENST00000559281 PPFIA1Q13136 1202 aa20.26■□□□□ 0.83
TPM1-218ENST00000559281 RSPH3Q86UC2 560 aa20.26■□□□□ 0.83
TPM1-218ENST00000559281 DBF4BQ8NFT6 615 aa20.26■□□□□ 0.83
TPM1-218ENST00000559281 LMBR1Q8WVP7 490 aa20.26■□□□□ 0.83
TPM1-218ENST00000559281 SEPT8Q92599 483 aa20.26■□□□□ 0.83
TPM1-218ENST00000559281 PGBD1Q96JS3 809 aa20.26■□□□□ 0.83
TPM1-218ENST00000559281 RAD9AQ99638 391 aa20.26■□□□□ 0.83
TPM1-218ENST00000559281 NFASCO94856 1347 aa20.26■□□□□ 0.83
TPM1-218ENST00000559281 ESYT2A0FGR8 921 aa20.25■□□□□ 0.83
TPM1-218ENST00000559281 MEIS1O00470 390 aa20.25■□□□□ 0.83
TPM1-218ENST00000559281 GTPBP6O43824 516 aaPredicted RBP20.25■□□□□ 0.83
TPM1-218ENST00000559281 GJB5O95377 273 aa20.25■□□□□ 0.83
TPM1-218ENST00000559281 AMHP03971 560 aa20.25■□□□□ 0.83
TPM1-218ENST00000559281 CLK2P49760 499 aaKnown RBP20.25■□□□□ 0.83
TPM1-218ENST00000559281 DEFB103AP81534 67 aa20.25■□□□□ 0.83
TPM1-218ENST00000559281 TAP1Q03518 808 aa20.25■□□□□ 0.83
TPM1-218ENST00000559281 PLEKHG4Q58EX7 1191 aa20.25■□□□□ 0.83
TPM1-218ENST00000559281 NIPA1Q7RTP0 329 aa20.25■□□□□ 0.83
TPM1-218ENST00000559281 CYP2W1Q8TAV3 490 aa20.25■□□□□ 0.83
TPM1-218ENST00000559281 SYMPKQ92797 1274 aaKnown RBP20.25■□□□□ 0.83
TPM1-218ENST00000559281 ZMYND12Q9H0C1 365 aa20.25■□□□□ 0.83
TPM1-218ENST00000559281 TSPYL2Q9H2G4 693 aaPredicted RBP20.25■□□□□ 0.83
TPM1-218ENST00000559281 TMEM260Q9NX78 707 aa20.25■□□□□ 0.83
TPM1-218ENST00000559281 RRN3P2A6NIE6 340 aa20.24■□□□□ 0.83
TPM1-218ENST00000559281 RPLP2P05387 115 aaKnown RBP20.24■□□□□ 0.83
TPM1-218ENST00000559281 CTSHP09668 335 aa20.24■□□□□ 0.83
TPM1-218ENST00000559281 MARK3P27448 753 aa20.24■□□□□ 0.83
TPM1-218ENST00000559281 CCDC85BQ15834 202 aaPredicted RBP20.24■□□□□ 0.83
TPM1-218ENST00000559281 JAKMIP3Q5VZ66 844 aa20.24■□□□□ 0.83
TPM1-218ENST00000559281 RUFY3Q7L099 469 aa20.24■□□□□ 0.83
TPM1-218ENST00000559281 RPAINQ86UA6 219 aa20.24■□□□□ 0.83
TPM1-218ENST00000559281 USP38Q8NB14 1042 aa20.24■□□□□ 0.83
TPM1-218ENST00000559281 BICD2Q8TD16 824 aa20.24■□□□□ 0.83
TPM1-218ENST00000559281 ARNTL2Q8WYA1 636 aa20.24■□□□□ 0.83
TPM1-218ENST00000559281 COL25A1Q9BXS0 654 aaPredicted RBP20.24■□□□□ 0.83
TPM1-218ENST00000559281 AGO4Q9HCK5 861 aaKnown RBP20.24■□□□□ 0.83
TPM1-218ENST00000559281 CYP46A1Q9Y6A2 500 aa20.24■□□□□ 0.83
TPM1-218ENST00000559281 ARP10275 920 aa20.23■□□□□ 0.83
TPM1-218ENST00000559281 EVCP57679 992 aa20.23■□□□□ 0.83
TPM1-218ENST00000559281 ACTR2P61160 394 aa20.23■□□□□ 0.83
TPM1-218ENST00000559281 SCN5AQ14524 2016 aa20.23■□□□□ 0.83
TPM1-218ENST00000559281 GRIK4Q16099 956 aa20.23■□□□□ 0.83
TPM1-218ENST00000559281 FAM26DQ5JW98 314 aa20.23■□□□□ 0.83
TPM1-218ENST00000559281 APBB2Q92870 758 aa20.23■□□□□ 0.83
TPM1-218ENST00000559281 RNF26Q9BY78 433 aaPredicted RBP20.23■□□□□ 0.83
TPM1-218ENST00000559281 CERS4Q9HA82 394 aa20.23■□□□□ 0.83
TPM1-218ENST00000559281 ZSWIM6Q9HCJ5 1215 aa20.23■□□□□ 0.83
TPM1-218ENST00000559281 TUBE1Q9UJT0 475 aa20.23■□□□□ 0.83
TPM1-218ENST00000559281 INSL6Q9Y581 213 aa20.23■□□□□ 0.83
TPM1-218ENST00000559281 NID2Q14112 1375 aa20.22■□□□□ 0.83
TPM1-218ENST00000559281 CYP3A4P08684 503 aa20.22■□□□□ 0.83
TPM1-218ENST00000559281 IFNAR1P17181 557 aa20.22■□□□□ 0.83
TPM1-218ENST00000559281 POU3F3P20264 500 aaPredicted RBP20.22■□□□□ 0.83
TPM1-218ENST00000559281 PDIA3P30101 505 aaKnown RBP20.22■□□□□ 0.83
TPM1-218ENST00000559281 STAT5BP51692 787 aa20.22■□□□□ 0.83
TPM1-218ENST00000559281 PKN1Q16512 942 aa20.22■□□□□ 0.83
TPM1-218ENST00000559281 TCTN1Q2MV58 587 aa20.22■□□□□ 0.83
TPM1-218ENST00000559281 ERICH6BQ5W0A0 696 aa20.22■□□□□ 0.83
TPM1-218ENST00000559281 PLPPR4Q7Z2D5 763 aa20.22■□□□□ 0.83
TPM1-218ENST00000559281 REXO1Q8N1G1 1221 aaKnown RBP20.22■□□□□ 0.83
TPM1-218ENST00000559281 CCDC148Q8NFR7 591 aa20.22■□□□□ 0.83
TPM1-218ENST00000559281 TRIP12Q14669 1992 aaPredicted RBP20.22■□□□□ 0.83
TPM1-218ENST00000559281 MYO9BQ13459 2157 aa20.21■□□□□ 0.83
TPM1-218ENST00000559281 MBLAC1A4D2B0 266 aaPredicted RBP20.21■□□□□ 0.83
TPM1-218ENST00000559281 SLC26A2P50443 739 aa20.21■□□□□ 0.83
TPM1-218ENST00000559281 CCT2P78371 535 aaKnown RBP20.21■□□□□ 0.83
TPM1-218ENST00000559281 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.21■□□□□ 0.83
TPM1-218ENST00000559281 TMCO2Q7Z6W1 182 aaPredicted RBP20.21■□□□□ 0.83
TPM1-218ENST00000559281 PLA2G4DQ86XP0 818 aa20.21■□□□□ 0.83
TPM1-218ENST00000559281 TRIM22Q8IYM9 498 aa20.21■□□□□ 0.83
TPM1-218ENST00000559281 MYOCDQ8IZQ8 938 aa20.21■□□□□ 0.83
TPM1-218ENST00000559281 ATXN2LQ8WWM7 1075 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms