RNA–Protein interactions for RNA: ENST00000559257.5

USP3-211, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 2,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-211ENST00000559257 EMP3P54852 163 aa9.19□□□□□ -0.94
USP3-211ENST00000559257 NR1D2Q14995 579 aa9.19□□□□□ -0.94
USP3-211ENST00000559257 ARHGEF18Q6ZSZ5 1173 aa9.19□□□□□ -0.94
USP3-211ENST00000559257 SPATA31D4Q6ZUB0 917 aa9.19□□□□□ -0.94
USP3-211ENST00000559257 RHOT2Q8IXI1 618 aa9.19□□□□□ -0.94
USP3-211ENST00000559257 STK32AQ8WU08 396 aa9.19□□□□□ -0.94
USP3-211ENST00000559257 NAT14Q8WUY8 206 aa9.19□□□□□ -0.94
USP3-211ENST00000559257 CEP63Q96MT8 703 aa9.19□□□□□ -0.94
USP3-211ENST00000559257 PSKH2Q96QS6 385 aa9.19□□□□□ -0.94
USP3-211ENST00000559257 RAB17Q9H0T7 212 aa9.19□□□□□ -0.94
USP3-211ENST00000559257 DISC1Q9NRI5 854 aa9.19□□□□□ -0.94
USP3-211ENST00000559257 PAG1Q9NWQ8 432 aa9.19□□□□□ -0.94
USP3-211ENST00000559257 ACAD8Q9UKU7 415 aa9.19□□□□□ -0.94
USP3-211ENST00000559257 USP32Q8NFA0 1604 aa9.19□□□□□ -0.94
USP3-211ENST00000559257 INO80Q9ULG1 1556 aaPredicted RBP9.18□□□□□ -0.94
USP3-211ENST00000559257 CHD2O14647 1828 aaKnown RBP9.18□□□□□ -0.94
USP3-211ENST00000559257 IFT172Q9UG01 1749 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 SMIM31A0A1B0GVY4 71 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 GOLGA8CPA6NN73 597 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 APBB1O00213 710 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 FBP2O00757 339 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 KCNJ13O60928 360 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 GLRX3O76003 335 aaKnown RBP9.18□□□□□ -0.94
USP3-211ENST00000559257 LDHCP07864 332 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 RGS2P41220 211 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 AK2P54819 239 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 OCRLQ01968 901 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 KIF23Q02241 960 aaPredicted RBP9.18□□□□□ -0.94
USP3-211ENST00000559257 R3HDM1Q15032 1099 aaKnown RBP9.18□□□□□ -0.94
USP3-211ENST00000559257 PPP2R2DQ66LE6 453 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 CAPN12Q6ZSI9 719 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 SPATA24Q86W54 205 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 TREML1Q86YW5 311 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 PASD1Q8IV76 773 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 SPARTQ8N0X7 666 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 LILRB2Q8N423 598 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 ENGASEQ8NFI3 743 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 GSDMBQ8TAX9 411 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 SLC16A10Q8TF71 515 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 ZNF333Q96JL9 665 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 RAB3IPQ96QF0 476 aaPredicted RBP9.18□□□□□ -0.94
USP3-211ENST00000559257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.18□□□□□ -0.941e-8■■■□□ 15.2
USP3-211ENST00000559257 B3GNT4Q9C0J1 378 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 GPR108Q9NPR9 543 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 PIH1D3Q9NQM4 214 aaKnown RBP9.18□□□□□ -0.94
USP3-211ENST00000559257 FANCLQ9NW38 375 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 RPL26L1Q9UNX3 145 aaKnown RBP9.18□□□□□ -0.94
USP3-211ENST00000559257 AGAP1Q9UPQ3 857 aa9.18□□□□□ -0.94
USP3-211ENST00000559257 HBS1LQ9Y450 684 aaKnown RBP9.18□□□□□ -0.94
USP3-211ENST00000559257 E9PBE3 544 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 ALDH1L1O75891 902 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 TPBGLP0DKB5 382 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 TMOD1P28289 359 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 RAD23BP54727 409 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 NLRP12P59046 1061 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 KCNJ2P63252 427 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 POLA2Q14181 598 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 DHX32Q7L7V1 743 aaKnown RBP9.17□□□□□ -0.94
USP3-211ENST00000559257 TAOK1Q7L7X3 1001 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 TRPM8Q7Z2W7 1104 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 CPLX4Q7Z7G2 160 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 CCNJLQ8IV13 435 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 NUP93Q8N1F7 819 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 BBS5Q8N3I7 341 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 MMGT1Q8N4V1 131 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 TNIP2Q8NFZ5 429 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 PRCCQ92733 491 aaPredicted RBP9.17□□□□□ -0.94
USP3-211ENST00000559257 KRT23Q9C075 422 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 MUC3BQ9H195 1237 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 GGNBP2Q9H3C7 697 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 CYP39A1Q9NYL5 469 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 ASAP1Q9ULH1 1129 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 NFE2L3Q9Y4A8 694 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 SETD1AO15047 1707 aaKnown RBP9.17□□□□□ -0.94
USP3-211ENST00000559257 IGF2BP3O00425 579 aaKnown RBP eCLIP9.17□□□□□ -0.94
USP3-211ENST00000559257 HAT1O14929 419 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 ZNF254O75437 659 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 ZBED1O96006 694 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 PCP11498 1178 aaKnown RBP9.17□□□□□ -0.94
USP3-211ENST00000559257 SERPINB3P29508 390 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 HSPA9P38646 679 aaKnown RBP9.17□□□□□ -0.94
USP3-211ENST00000559257 SKIV2L2P42285 1042 aaKnown RBP9.17□□□□□ -0.94
USP3-211ENST00000559257 ZC3H6P61129 1189 aaKnown RBP9.17□□□□□ -0.94
USP3-211ENST00000559257 B2MP61769 119 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 GALNTL6Q49A17 601 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 C6orf183Q5T699 404 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 METTL21CQ5VZV1 264 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 TMEM214Q6NUQ4 689 aaKnown RBP9.17□□□□□ -0.94
USP3-211ENST00000559257 NDUFAF2Q8N183 169 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 CHCHD4Q8N4Q1 142 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 TSEN2Q8NCE0 465 aaKnown RBP9.17□□□□□ -0.94
USP3-211ENST00000559257 PPFIBP2Q8ND30 876 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 TOR1AIP2Q8NFQ8 470 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 ZC3H15Q8WU90 426 aaKnown RBP9.17□□□□□ -0.94
USP3-211ENST00000559257 UCMAQ8WVF2 138 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 EGLN2Q96KS0 407 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 CEP44Q9C0F1 390 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 C12orf10Q9HB07 376 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 LZTFL1Q9NQ48 299 aa9.17□□□□□ -0.94
USP3-211ENST00000559257 DSEQ9UL01 958 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms