RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 IRAK1P51617 712 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 ARID5AQ03989 594 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 USP17L24Q0WX57 530 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 TTMPQ5BVD1 217 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 ALS2CLQ60I27 953 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 USP17L6PQ6QN14 398 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 LUC7LQ9NQ29 371 aaKnown RBP18.25■□□□□ 0.51
SPG11-215ENST00000559193 EMILIN3Q9NT22 766 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 AIPL1Q9NZN9 384 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.25■□□□□ 0.51
SPG11-215ENST00000559193 FRMD3A2A2Y4 597 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 ZSCAN5CA6NGD5 496 aaPredicted RBP18.25■□□□□ 0.51
SPG11-215ENST00000559193 OPA1O60313 960 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 MED24O75448 989 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 SERPINB2P05120 415 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 EPB41P11171 864 aaKnown RBP18.25■□□□□ 0.51
SPG11-215ENST00000559193 STAT3P40763 770 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 NNTQ13423 1086 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 ARSHQ5FYA8 562 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 MEI1Q5TIA1 1274 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 CERS5Q8N5B7 392 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 ARL8AQ96BM9 186 aa18.25■□□□□ 0.51
SPG11-215ENST00000559193 GRIN2DO15399 1336 aa18.24■□□□□ 0.51
SPG11-215ENST00000559193 SLURP2P0DP57 97 aa18.24■□□□□ 0.51
SPG11-215ENST00000559193 CARSP49589 748 aaKnown RBP18.24■□□□□ 0.51
SPG11-215ENST00000559193 KLHL30Q0D2K2 578 aa18.24■□□□□ 0.51
SPG11-215ENST00000559193 ADAM9Q13443 819 aa18.24■□□□□ 0.51
SPG11-215ENST00000559193 INPP4AQ96PE3 977 aaPredicted RBP18.24■□□□□ 0.51
SPG11-215ENST00000559193 NAP1L4Q99733 375 aaKnown RBP18.24■□□□□ 0.51
SPG11-215ENST00000559193 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.24■□□□□ 0.51
SPG11-215ENST00000559193 ADAMTS1Q9UHI8 967 aa18.24■□□□□ 0.51
SPG11-215ENST00000559193 PACSIN2Q9UNF0 486 aaPredicted RBP18.24■□□□□ 0.51
SPG11-215ENST00000559193 GREB1LQ9C091 1923 aaPredicted RBP18.24■□□□□ 0.51
SPG11-215ENST00000559193 ATAD5Q96QE3 1844 aa18.24■□□□□ 0.51
SPG11-215ENST00000559193 LTBP4Q8N2S1 1624 aa18.24■□□□□ 0.51
SPG11-215ENST00000559193 ANKRD65E5RJM6 399 aa18.24■□□□□ 0.51
SPG11-215ENST00000559193 HEXIM1O94992 359 aaKnown RBP18.24■□□□□ 0.51
SPG11-215ENST00000559193 GYS1P13807 737 aa18.24■□□□□ 0.51
SPG11-215ENST00000559193 SLC12A3P55017 1021 aa18.24■□□□□ 0.51
SPG11-215ENST00000559193 CORO7P57737 925 aa18.24■□□□□ 0.51
SPG11-215ENST00000559193 ENOX2Q16206 610 aaKnown RBP18.24■□□□□ 0.51
SPG11-215ENST00000559193 ASIC2Q16515 512 aa18.24■□□□□ 0.51
SPG11-215ENST00000559193 KIAA0753Q2KHM9 967 aa18.24■□□□□ 0.51
SPG11-215ENST00000559193 EHD4Q9H223 541 aa18.24■□□□□ 0.51
SPG11-215ENST00000559193 THSD7AQ9UPZ6 1657 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 ESYT3A0FGR9 886 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 GRID2IPA4D2P6 1211 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 MPHOSPH10O00566 681 aaKnown RBP18.23■□□□□ 0.51
SPG11-215ENST00000559193 RIMBP2O15034 1052 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 HSF2BPO75031 334 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 CASP5P51878 434 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 KCNH2Q12809 1159 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 EDRF1Q3B7T1 1238 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 IFT20Q8IY31 132 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 ZIM3Q96PE6 472 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 CAPS2Q9BXY5 557 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 LRRC4BQ9NT99 713 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 NFU1Q9UMS0 254 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 POTEFA5A3E0 1075 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 FAM153BP0C7A2 387 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 POTEIP0CG38 1075 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 QRICH1Q2TAL8 776 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 FAM153CQ494X1 144 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 DPY19L2P1Q6NXN4 242 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 POTEGQ6S5H5 508 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 POTEEQ6S8J3 1075 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 GBP6Q6ZN66 633 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 MBOAT7Q96N66 472 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 ANO3Q9BYT9 981 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 DHX36Q9H2U1 1008 aaKnown RBP18.23■□□□□ 0.51
SPG11-215ENST00000559193 EPB41L5Q9HCM4 733 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 USP40Q9NVE5 1235 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 FAM153AQ9UHL3 310 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 QSER1Q2KHR3 1735 aa18.23■□□□□ 0.51
SPG11-215ENST00000559193 ACTN1P12814 892 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 HOXA10P31260 410 aaPredicted RBP18.22■□□□□ 0.51
SPG11-215ENST00000559193 GUCY2DQ02846 1103 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 PPP4R3CPQ6ZMV5 832 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 RUFY1Q96T51 708 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 MXD3Q9BW11 206 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 ADAMTSL1Q8N6G6 1762 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 PITPNM2Q9BZ72 1349 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 LRRC37AA6NMS7 1700 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 CYP3A7-CYP3A51PA0A087WV96 503 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 CETN3O15182 167 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 SLC26A4O43511 780 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 KRT18P05783 430 aaKnown RBP18.22■□□□□ 0.51
SPG11-215ENST00000559193 ADRA2BP18089 450 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 CYP3A7P24462 503 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 NR2F2P24468 414 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 EPS15P42566 896 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 MAGEA9P43362 315 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 SKIDA1Q1XH10 827 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 DNAJC21Q5F1R6 531 aaKnown RBP18.22■□□□□ 0.51
SPG11-215ENST00000559193 KRT12Q99456 494 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 ZHX3Q9H4I2 956 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 HDAC9Q9UKV0 1011 aa18.22■□□□□ 0.51
SPG11-215ENST00000559193 MYH4Q9Y623 1939 aa18.21■□□□□ 0.51
SPG11-215ENST00000559193 EIF3HO15372 352 aaKnown RBP eCLIP18.21■□□□□ 0.514e-7■■□□□ 13.9
SPG11-215ENST00000559193 USP11P51784 963 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms