RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 POMZP3Q6PJE2 187 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 CEP128Q6ZU80 1094 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 LIN37Q96GY3 246 aaPredicted RBP6.58□□□□□ -1.36
CASC4-207ENST00000559037 HHIPL1Q96JK4 782 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 SLC12A9Q9BXP2 914 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 RNF32Q9H0A6 362 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 NOL6Q9H6R4 1146 aaKnown RBP6.58□□□□□ -1.36
CASC4-207ENST00000559037 FAM86C1Q9NVL1 165 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 GPR160Q9UJ42 338 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 MINPP1Q9UNW1 487 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 TAF6LQ9Y6J9 622 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 UBR2Q8IWV8 1755 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 C4AP0C0L4 1744 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 TJP1Q07157 1748 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 UTRNP46939 3433 aa6.58□□□□□ -1.36
CASC4-207ENST00000559037 BRCA1P38398 1863 aaKnown RBP6.58□□□□□ -1.36
CASC4-207ENST00000559037 CICQ96RK0 1608 aaPredicted RBP6.58□□□□□ -1.36
CASC4-207ENST00000559037 AFDNP55196 1824 aaKnown RBP6.57□□□□□ -1.36
CASC4-207ENST00000559037 FADS2P1A8MWK0 482 aa6.57□□□□□ -1.36
CASC4-207ENST00000559037 SMAD7O15105 426 aaKnown RBP6.57□□□□□ -1.36
CASC4-207ENST00000559037 USP2O75604 605 aaPredicted RBP6.57□□□□□ -1.36
CASC4-207ENST00000559037 YBX3P16989 372 aaKnown RBP eCLIP6.57□□□□□ -1.36
CASC4-207ENST00000559037 RTP1P59025 263 aa6.57□□□□□ -1.36
CASC4-207ENST00000559037 PKN1Q16512 942 aa6.57□□□□□ -1.36
CASC4-207ENST00000559037 FXNQ16595 210 aa6.57□□□□□ -1.36
CASC4-207ENST00000559037 MLANAQ16655 118 aa6.57□□□□□ -1.36
CASC4-207ENST00000559037 C1orf141Q5JVX7 400 aa6.57□□□□□ -1.36
CASC4-207ENST00000559037 RTP2Q5QGT7 225 aa6.57□□□□□ -1.36
CASC4-207ENST00000559037 KIAA1211LQ6NV74 962 aa6.57□□□□□ -1.36
CASC4-207ENST00000559037 SMIM5Q71RC9 77 aa6.57□□□□□ -1.36
CASC4-207ENST00000559037 ADAT2Q7Z6V5 191 aaKnown RBP6.57□□□□□ -1.36
CASC4-207ENST00000559037 NLRX1Q86UT6 975 aa6.57□□□□□ -1.36
CASC4-207ENST00000559037 KSR1Q8IVT5 923 aa6.57□□□□□ -1.36
CASC4-207ENST00000559037 NAT16Q8N8M0 369 aa6.57□□□□□ -1.36
CASC4-207ENST00000559037 FBXO15Q8NCQ5 510 aaPredicted RBP6.57□□□□□ -1.36
CASC4-207ENST00000559037 BRF1Q92994 677 aa6.57□□□□□ -1.36
CASC4-207ENST00000559037 INTS4Q96HW7 963 aaKnown RBP6.57□□□□□ -1.36
CASC4-207ENST00000559037 EPB41L4BQ9H329 900 aa6.57□□□□□ -1.36
CASC4-207ENST00000559037 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.57□□□□□ -1.36
CASC4-207ENST00000559037 EBF1Q9UH73 591 aa6.57□□□□□ -1.36
CASC4-207ENST00000559037 PCDHB10Q9UN67 800 aa6.57□□□□□ -1.36
CASC4-207ENST00000559037 N4BP2Q86UW6 1770 aaPredicted RBP6.57□□□□□ -1.36
CASC4-207ENST00000559037 SBF1O95248 1867 aa6.56□□□□□ -1.36
CASC4-207ENST00000559037 HRKO00198 91 aa6.56□□□□□ -1.36
CASC4-207ENST00000559037 RNMTO43148 476 aaKnown RBP6.56□□□□□ -1.36
CASC4-207ENST00000559037 RPS6KA4O75676 772 aa6.56□□□□□ -1.36
CASC4-207ENST00000559037 PPP2R1AP30153 589 aa6.56□□□□□ -1.36
CASC4-207ENST00000559037 DNAJA1P31689 397 aaKnown RBP6.56□□□□□ -1.36
CASC4-207ENST00000559037 HLA-DQA1Q5Y7H0 255 aa6.56□□□□□ -1.36
CASC4-207ENST00000559037 EEF1DP3Q658K8 133 aa6.56□□□□□ -1.36
CASC4-207ENST00000559037 RCSD1Q6JBY9 416 aa6.56□□□□□ -1.36
CASC4-207ENST00000559037 MCF2L2Q86YR7 1114 aa6.56□□□□□ -1.36
CASC4-207ENST00000559037 ARHGEF39Q8N4T4 335 aa6.56□□□□□ -1.36
CASC4-207ENST00000559037 APBA2Q99767 749 aa6.56□□□□□ -1.36
CASC4-207ENST00000559037 SLC52A2Q9HAB3 445 aa6.56□□□□□ -1.36
CASC4-207ENST00000559037 AP5S1Q9NUS5 200 aa6.56□□□□□ -1.36
CASC4-207ENST00000559037 CGGBP1Q9UFW8 167 aaPredicted RBP6.56□□□□□ -1.36
CASC4-207ENST00000559037 GPR55Q9Y2T6 319 aaPredicted RBP6.56□□□□□ -1.36
CASC4-207ENST00000559037 R3HCC1Q9Y3T6 440 aaKnown RBP6.56□□□□□ -1.36
CASC4-207ENST00000559037 KIAA1551Q9HCM1 1747 aa6.56□□□□□ -1.36
CASC4-207ENST00000559037 TRBV23OR9-2A0A075B6M9 112 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 FGF10O15520 208 aaPredicted RBP6.55□□□□□ -1.36
CASC4-207ENST00000559037 PSPNO60542 156 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 TBC1D8O95759 1140 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 GSTM1P09488 218 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 PNLIPP16233 465 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 TRHRP34981 398 aaPredicted RBP6.55□□□□□ -1.36
CASC4-207ENST00000559037 ARL4AP40617 200 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 CORO7P57737 925 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 LAPTM5Q13571 262 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 CNGB1Q14028 1251 aaPredicted RBP6.55□□□□□ -1.36
CASC4-207ENST00000559037 TIGD5Q53EQ6 642 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 OLFML2BQ68BL8 750 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 SLCO6A1Q86UG4 719 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 IL17REQ8NFR9 667 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 NLGN2Q8NFZ4 835 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 SHISA4Q96DD7 197 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 PHACTR3Q96KR7 559 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 ZDHHC15Q96MV8 337 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 EPN3Q9H201 632 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 ZNF408Q9H9D4 720 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 SUGT1Q9Y2Z0 365 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 CD2APQ9Y5K6 639 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 MRVI1Q9Y6F6 885 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 GOLGB1Q14789 3259 aaKnown RBP6.55□□□□□ -1.36
CASC4-207ENST00000559037 ARFGEF1Q9Y6D6 1849 aa6.55□□□□□ -1.36
CASC4-207ENST00000559037 MRC1P22897 1456 aa6.54□□□□□ -1.36
CASC4-207ENST00000559037 BTBD11A6QL63 1104 aa6.54□□□□□ -1.36
CASC4-207ENST00000559037 NOTOA8MTQ0 251 aa6.54□□□□□ -1.36
CASC4-207ENST00000559037 U2SURPO15042 1029 aaKnown RBP6.54□□□□□ -1.36
CASC4-207ENST00000559037 ANP32CO43423 234 aa6.54□□□□□ -1.36
CASC4-207ENST00000559037 PEX10O60683 326 aa6.54□□□□□ -1.36
CASC4-207ENST00000559037 CD3EP07766 207 aa6.54□□□□□ -1.36
CASC4-207ENST00000559037 YY1P25490 414 aa6.54□□□□□ -1.36
CASC4-207ENST00000559037 AMPD2Q01433 879 aa6.54□□□□□ -1.36
CASC4-207ENST00000559037 TMEM62Q0P6H9 643 aa6.54□□□□□ -1.36
CASC4-207ENST00000559037 MESP2Q0VG99 397 aa6.54□□□□□ -1.36
CASC4-207ENST00000559037 HSF5Q4G112 596 aaPredicted RBP6.54□□□□□ -1.36
CASC4-207ENST00000559037 PRR23BQ6ZRT6 265 aa6.54□□□□□ -1.36
CASC4-207ENST00000559037 FAM178BQ8IXR5 827 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms