RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 PDHXO00330 501 aa8.97□□□□□ -0.97
SPG11-213ENST00000558988 ZBTB39O15060 712 aa8.97□□□□□ -0.97
SPG11-213ENST00000558988 RAD21O60216 631 aa8.97□□□□□ -0.97
SPG11-213ENST00000558988 FOXD2O60548 495 aaPredicted RBP8.97□□□□□ -0.97
SPG11-213ENST00000558988 MAOBP27338 520 aa8.97□□□□□ -0.97
SPG11-213ENST00000558988 MCAMP43121 646 aa8.97□□□□□ -0.97
SPG11-213ENST00000558988 GSTO1P78417 241 aa8.97□□□□□ -0.97
SPG11-213ENST00000558988 PPATQ06203 517 aa8.97□□□□□ -0.97
SPG11-213ENST00000558988 FBXO15Q8NCQ5 510 aaPredicted RBP8.97□□□□□ -0.97
SPG11-213ENST00000558988 PANK1Q8TE04 598 aa8.97□□□□□ -0.97
SPG11-213ENST00000558988 PRIMPOLQ96LW4 560 aa8.97□□□□□ -0.97
SPG11-213ENST00000558988 ZKSCAN3Q9BRR0 538 aa8.97□□□□□ -0.97
SPG11-213ENST00000558988 NOL10Q9BSC4 688 aaKnown RBP8.97□□□□□ -0.97
SPG11-213ENST00000558988 CD320Q9NPF0 282 aa8.97□□□□□ -0.97
SPG11-213ENST00000558988 RAD18Q9NS91 495 aa8.97□□□□□ -0.97
SPG11-213ENST00000558988 PTCH2Q9Y6C5 1203 aa8.97□□□□□ -0.97
SPG11-213ENST00000558988 GAKO14976 1311 aa8.97□□□□□ -0.97
SPG11-213ENST00000558988 TRIM75PA6NK02 468 aa8.96□□□□□ -0.98
SPG11-213ENST00000558988 TLR2O60603 784 aa8.96□□□□□ -0.98
SPG11-213ENST00000558988 ENTPD3O75355 529 aa8.96□□□□□ -0.98
SPG11-213ENST00000558988 LDHCP07864 332 aa8.96□□□□□ -0.98
SPG11-213ENST00000558988 UQCRFS1P1P0C7P4 283 aa8.96□□□□□ -0.98
SPG11-213ENST00000558988 AFMP43652 599 aa8.96□□□□□ -0.98
SPG11-213ENST00000558988 ATP8B2P98198 1209 aa8.96□□□□□ -0.98
SPG11-213ENST00000558988 ARHGEF6Q15052 776 aa8.96□□□□□ -0.98
SPG11-213ENST00000558988 SLC4A8Q2Y0W8 1093 aa8.96□□□□□ -0.98
SPG11-213ENST00000558988 SLC9C1Q4G0N8 1177 aa8.96□□□□□ -0.98
SPG11-213ENST00000558988 TNNI3KQ59H18 835 aa8.96□□□□□ -0.98
SPG11-213ENST00000558988 CCDC158Q5M9N0 1113 aa8.96□□□□□ -0.98
SPG11-213ENST00000558988 TEX11Q8IYF3 940 aa8.96□□□□□ -0.98
SPG11-213ENST00000558988 SCYL3Q8IZE3 742 aa8.96□□□□□ -0.98
SPG11-213ENST00000558988 ASAP3Q8TDY4 903 aa8.96□□□□□ -0.98
SPG11-213ENST00000558988 ZNF384Q8TF68 577 aa8.96□□□□□ -0.98
SPG11-213ENST00000558988 CCDC8Q9H0W5 538 aaPredicted RBP8.96□□□□□ -0.98
SPG11-213ENST00000558988 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.96□□□□□ -0.98
SPG11-213ENST00000558988 ZHX2Q9Y6X8 837 aa8.96□□□□□ -0.98
SPG11-213ENST00000558988 FPGT-TNNI3KV9GXZ4 949 aa8.96□□□□□ -0.98
SPG11-213ENST00000558988 TMEM265A0A087WTH1 108 aa8.95□□□□□ -0.98
SPG11-213ENST00000558988 GPR75-ASB3A0A0A6YYF3 556 aa8.95□□□□□ -0.98
SPG11-213ENST00000558988 TMEM253P0C7T8 217 aa8.95□□□□□ -0.98
SPG11-213ENST00000558988 CYP2C8P10632 490 aa8.95□□□□□ -0.98
SPG11-213ENST00000558988 LACTBP83111 547 aaPredicted RBP8.95□□□□□ -0.98
SPG11-213ENST00000558988 NOL9Q5SY16 702 aaKnown RBP8.95□□□□□ -0.98
SPG11-213ENST00000558988 NAA16Q6N069 864 aaPredicted RBP8.95□□□□□ -0.98
SPG11-213ENST00000558988 SH3RF3Q8TEJ3 882 aaPredicted RBP8.95□□□□□ -0.98
SPG11-213ENST00000558988 SH3TC2Q8TF17 1288 aa8.95□□□□□ -0.98
SPG11-213ENST00000558988 NSUN4Q96CB9 384 aaKnown RBP8.95□□□□□ -0.98
SPG11-213ENST00000558988 IDI2Q9BXS1 227 aa8.95□□□□□ -0.98
SPG11-213ENST00000558988 AATFQ9NY61 560 aaKnown RBP eCLIP8.95□□□□□ -0.98
SPG11-213ENST00000558988 ZNF112Q9UJU3 913 aa8.95□□□□□ -0.98
SPG11-213ENST00000558988 EXOC6BQ9Y2D4 811 aa8.95□□□□□ -0.98
SPG11-213ENST00000558988 PDS5AQ29RF7 1337 aaKnown RBP8.95□□□□□ -0.98
SPG11-213ENST00000558988 RFX7Q2KHR2 1363 aa8.95□□□□□ -0.98
SPG11-213ENST00000558988 IDH1O75874 414 aaKnown RBP8.94□□□□□ -0.98
SPG11-213ENST00000558988 CEACAM5P06731 702 aa8.94□□□□□ -0.98
SPG11-213ENST00000558988 EN2P19622 333 aaPredicted RBP8.94□□□□□ -0.98
SPG11-213ENST00000558988 PSMC4P43686 418 aa8.94□□□□□ -0.98
SPG11-213ENST00000558988 OXCT1P55809 520 aa8.94□□□□□ -0.98
SPG11-213ENST00000558988 RHBDL3P58872 404 aa8.94□□□□□ -0.98
SPG11-213ENST00000558988 KRTAP10-2P60368 255 aa8.94□□□□□ -0.98
SPG11-213ENST00000558988 ATG14Q6ZNE5 492 aa8.94□□□□□ -0.98
SPG11-213ENST00000558988 ANKRD23Q86SG2 305 aa8.94□□□□□ -0.98
SPG11-213ENST00000558988 GGNQ86UU5 652 aa8.94□□□□□ -0.98
SPG11-213ENST00000558988 MAPKAPK5Q8IW41 473 aa8.94□□□□□ -0.98
SPG11-213ENST00000558988 SSH3Q8TE77 659 aa8.94□□□□□ -0.98
SPG11-213ENST00000558988 DIRC2Q96SL1 478 aa8.94□□□□□ -0.98
SPG11-213ENST00000558988 PARK7Q99497 189 aaKnown RBP8.94□□□□□ -0.98
SPG11-213ENST00000558988 VRTNQ9H8Y1 702 aa8.94□□□□□ -0.98
SPG11-213ENST00000558988 MKNK2Q9HBH9 465 aa8.94□□□□□ -0.98
SPG11-213ENST00000558988 BIN2Q9UBW5 565 aaPredicted RBP8.94□□□□□ -0.98
SPG11-213ENST00000558988 SAP30BPQ9UHR5 308 aaKnown RBP8.94□□□□□ -0.98
SPG11-213ENST00000558988 ZBED9Q6R2W3 1325 aa8.94□□□□□ -0.98
SPG11-213ENST00000558988 PDE4DIPQ5VU43 2346 aa8.94□□□□□ -0.98
SPG11-213ENST00000558988 DOCK1Q14185 1865 aa8.94□□□□□ -0.98
SPG11-213ENST00000558988 CTNND1O60716 968 aaKnown RBP8.93□□□□□ -0.98
SPG11-213ENST00000558988 CEP85Q6P2H3 762 aa8.93□□□□□ -0.98
SPG11-213ENST00000558988 ADGRA1Q86SQ6 560 aa8.93□□□□□ -0.98
SPG11-213ENST00000558988 AACSQ86V21 672 aa8.93□□□□□ -0.98
SPG11-213ENST00000558988 CRACR2BQ8N4Y2 399 aaPredicted RBP8.93□□□□□ -0.98
SPG11-213ENST00000558988 MIGA1Q8NAN2 632 aa8.93□□□□□ -0.98
SPG11-213ENST00000558988 RAET1EQ8TD07 263 aa8.93□□□□□ -0.98
SPG11-213ENST00000558988 SMCR8Q8TEV9 937 aaPredicted RBP8.93□□□□□ -0.98
SPG11-213ENST00000558988 TGFBRAP1Q8WUH2 860 aa8.93□□□□□ -0.98
SPG11-213ENST00000558988 ARMC5Q96C12 935 aa8.93□□□□□ -0.98
SPG11-213ENST00000558988 OSBPL5Q9H0X9 879 aaPredicted RBP8.93□□□□□ -0.98
SPG11-213ENST00000558988 KCNK12Q9HB15 430 aa8.93□□□□□ -0.98
SPG11-213ENST00000558988 IL1RAPL2Q9NP60 686 aa8.93□□□□□ -0.98
SPG11-213ENST00000558988 ZCCHC17Q9NP64 241 aaKnown RBP8.93□□□□□ -0.98
SPG11-213ENST00000558988 PARD6AQ9NPB6 346 aa8.93□□□□□ -0.98
SPG11-213ENST00000558988 PIH1D3Q9NQM4 214 aaKnown RBP8.93□□□□□ -0.98
SPG11-213ENST00000558988 DBNLQ9UJU6 430 aaKnown RBP8.93□□□□□ -0.98
SPG11-213ENST00000558988 ATRNL1Q5VV63 1379 aa8.93□□□□□ -0.98
SPG11-213ENST00000558988 KIAA0100Q14667 2235 aaKnown RBP8.92□□□□□ -0.98
SPG11-213ENST00000558988 MYO5AQ9Y4I1 1855 aaKnown RBP8.92□□□□□ -0.98
SPG11-213ENST00000558988 A0A0G2JLL6 359 aaPredicted RBP8.92□□□□□ -0.98
SPG11-213ENST00000558988 CXCL11O14625 94 aa8.92□□□□□ -0.98
SPG11-213ENST00000558988 BAG3O95817 575 aa8.92□□□□□ -0.98
SPG11-213ENST00000558988 CYP7A1P22680 504 aa8.92□□□□□ -0.98
SPG11-213ENST00000558988 CTGFP29279 349 aa8.92□□□□□ -0.98
SPG11-213ENST00000558988 DYNLL1P63167 89 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms