RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 LGALS2P05162 132 aa9.64□□□□□ -0.87
TPM1-213ENST00000558400 CHMP4BP1P59074 171 aa9.64□□□□□ -0.87
TPM1-213ENST00000558400 KRT25Q7Z3Z0 450 aa9.64□□□□□ -0.87
TPM1-213ENST00000558400 NECAB1Q8N987 351 aa9.64□□□□□ -0.87
TPM1-213ENST00000558400 CYP2W1Q8TAV3 490 aa9.64□□□□□ -0.87
TPM1-213ENST00000558400 CAGE1Q8TC20 777 aa9.64□□□□□ -0.87
TPM1-213ENST00000558400 SYMPKQ92797 1274 aaKnown RBP9.64□□□□□ -0.87
TPM1-213ENST00000558400 FAM122AQ96E09 287 aa9.64□□□□□ -0.87
TPM1-213ENST00000558400 PGBD1Q96JS3 809 aa9.64□□□□□ -0.87
TPM1-213ENST00000558400 NAP1L4Q99733 375 aaKnown RBP9.64□□□□□ -0.87
TPM1-213ENST00000558400 ALG1Q9BT22 464 aa9.64□□□□□ -0.87
TPM1-213ENST00000558400 NOC4LQ9BVI4 516 aaKnown RBP9.64□□□□□ -0.87
TPM1-213ENST00000558400 SMARCAD1Q9H4L7 1026 aa9.64□□□□□ -0.87
TPM1-213ENST00000558400 AGO4Q9HCK5 861 aaKnown RBP9.64□□□□□ -0.87
TPM1-213ENST00000558400 BRMS1Q9HCU9 246 aa9.64□□□□□ -0.87
TPM1-213ENST00000558400 JPH1Q9HDC5 661 aaPredicted RBP9.64□□□□□ -0.87
TPM1-213ENST00000558400 SLC9A2Q9UBY0 812 aa9.64□□□□□ -0.87
TPM1-213ENST00000558400 GTF2IRD1Q9UHL9 959 aa9.64□□□□□ -0.87
TPM1-213ENST00000558400 TCEAL9Q9UHQ7 104 aa9.64□□□□□ -0.87
TPM1-213ENST00000558400 RAPGEFL1Q9UHV5 662 aa9.64□□□□□ -0.87
TPM1-213ENST00000558400 NCOR1O75376 2440 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 FAM86B1E9PN63 330 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 IPO5O00410 1097 aaKnown RBP9.63□□□□□ -0.87
TPM1-213ENST00000558400 CTDNEP1O95476 244 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 PFKMP08237 780 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 FAM86B2P0C5J1 330 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 ARP10275 920 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 ITGB8P26012 769 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 RFC2P35250 354 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 TCF7P36402 384 aaPredicted RBP9.63□□□□□ -0.87
TPM1-213ENST00000558400 MCM2P49736 904 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 SLC26A2P50443 739 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 HMGN5P82970 282 aaKnown RBP9.63□□□□□ -0.87
TPM1-213ENST00000558400 TRIM29Q14134 588 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 NONOQ15233 471 aaKnown RBP eCLIP9.63□□□□□ -0.87
TPM1-213ENST00000558400 MOXD1Q6UVY6 613 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 GLG1Q92896 1179 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 KIF2CQ99661 725 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 PHF20Q9BVI0 1012 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 PPP1R12CQ9BZL4 782 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 MTIF3Q9H2K0 278 aaKnown RBP9.63□□□□□ -0.87
TPM1-213ENST00000558400 AZI2Q9H6S1 392 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 BCAS3Q9H6U6 928 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 TRMT13Q9NUP7 481 aaKnown RBP9.63□□□□□ -0.87
TPM1-213ENST00000558400 ERAP1Q9NZ08 941 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 HDAC6Q9UBN7 1215 aa9.63□□□□□ -0.87
TPM1-213ENST00000558400 KIAA1217Q5T5P2 1943 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 LRRC37A2A6NM11 1700 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 NRCAMQ92823 1304 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 LTBP2Q14767 1821 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 IGLV3-22A0A075B6J6 115 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 CYP3A7-CYP3A51PA0A087WV96 503 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 CCDC194A0A1B0GVG4 234 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 GSTTP1A0A1W2PQM5 241 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 C17orf102A2RUQ5 167 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 RRN3P2A6NIE6 340 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 M0R2N6 131 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 SORBS3O60504 671 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 ATG7O95352 703 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 FGBP02675 491 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 RPLP2P05387 115 aaKnown RBP9.62□□□□□ -0.87
TPM1-213ENST00000558400 ZNF286BP0CG31 522 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 CYP2C9P11712 490 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 FDPSP14324 419 aaKnown RBP9.62□□□□□ -0.87
TPM1-213ENST00000558400 CYP3A7P24462 503 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 CYP2C18P33260 490 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 SP4Q02446 784 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 PTK7Q13308 1070 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 PRR16Q569H4 304 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 UTP14CQ5TAP6 766 aaKnown RBP9.62□□□□□ -0.87
TPM1-213ENST00000558400 GDF6Q6KF10 455 aaPredicted RBP9.62□□□□□ -0.87
TPM1-213ENST00000558400 PSRC1Q6PGN9 363 aaPredicted RBP9.62□□□□□ -0.87
TPM1-213ENST00000558400 PLPPR4Q7Z2D5 763 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 NSUN7Q8NE18 718 aaKnown RBP9.62□□□□□ -0.87
TPM1-213ENST00000558400 MAFAQ8NHW3 353 aaPredicted RBP9.62□□□□□ -0.87
TPM1-213ENST00000558400 TBCKQ8TEA7 893 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 AFAP1L1Q8TED9 768 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 RIT2Q99578 217 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 ZNF577Q9BSK1 485 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 RNPEPQ9H4A4 650 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 IL23AQ9NPF7 189 aa9.62□□□□□ -0.87
TPM1-213ENST00000558400 DHX15O43143 795 aaKnown RBP9.61□□□□□ -0.87
TPM1-213ENST00000558400 CAND2O75155 1236 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 LGR5O75473 907 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 IQCF3P0C7M6 154 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 SMIM10L2AP0DMW4 78 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 SMIM10L2BP0DMW5 78 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 CSF2RAP15509 400 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 GCFC2P16383 781 aaKnown RBP9.61□□□□□ -0.87
TPM1-213ENST00000558400 STAT5BP51692 787 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 CCL23P55773 120 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 ACTR2P61160 394 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 KRT76Q01546 638 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 RBL2Q08999 1139 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 SAFBQ15424 915 aaKnown RBP eCLIP9.61□□□□□ -0.87
TPM1-213ENST00000558400 SHHQ15465 462 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 Q4G0T1 1027 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 ZNF697Q5TEC3 545 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 FAM160B1Q5W0V3 765 aa9.61□□□□□ -0.87
TPM1-213ENST00000558400 PPP4R3AQ6IN85 833 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms