RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 FAM26FQ5R3K3 315 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 PAPD7Q5XG87 772 aaKnown RBP9.21□□□□□ -0.94
SPG11-209ENST00000558253 TTBK2Q6IQ55 1244 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 KIAA1328Q86T90 577 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 CTAGE6Q86UF2 777 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 FAM160B2Q86V87 743 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 KIAA0825Q8IV33 1275 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 FMNL3Q8IVF7 1028 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 CTAGE4Q8IX94 777 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 ZC3H3Q8IXZ2 948 aaKnown RBP9.21□□□□□ -0.94
SPG11-209ENST00000558253 C7orf43Q8WVR3 580 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 KCTD12Q96CX2 325 aaKnown RBP9.21□□□□□ -0.94
SPG11-209ENST00000558253 DNAJC19Q96DA6 116 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 POLR3CQ9BUI4 534 aaPredicted RBP9.21□□□□□ -0.94
SPG11-209ENST00000558253 NHEJ1Q9H9Q4 299 aaPredicted RBP9.21□□□□□ -0.94
SPG11-209ENST00000558253 SLC39A2Q9NP94 309 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 KCND2Q9NZV8 630 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 RAB21Q9UL25 225 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 MYO6Q9UM54 1294 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 COL4A3BPQ9Y5P4 624 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 ANKRD31Q8N7Z5 1873 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 RGPD3A6NKT7 1758 aaPredicted RBP9.2□□□□□ -0.94
SPG11-209ENST00000558253 RGPD4Q7Z3J3 1758 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 DDTLA6NHG4 134 aaPredicted RBP9.2□□□□□ -0.94
SPG11-209ENST00000558253 GOLGA8CPA6NN73 597 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 MEIS2O14770 477 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 CETN3O15182 167 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 NDUFB10O96000 172 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 FCER1AP12319 257 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 IDEP14735 1019 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 ZSCAN20P17040 1043 aaPredicted RBP9.2□□□□□ -0.94
SPG11-209ENST00000558253 GAP43P17677 238 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 RPL13P26373 211 aaKnown RBP9.2□□□□□ -0.94
SPG11-209ENST00000558253 SLC16A2P36021 539 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 VAV2P52735 878 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 EIF6P56537 245 aaKnown RBP9.2□□□□□ -0.94
SPG11-209ENST00000558253 CBX1P83916 185 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 ITIH3Q06033 890 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 COASYQ13057 564 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 UBE2SQ16763 222 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 ZCWPW2Q504Y3 356 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 TEX35Q5T0J7 233 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 CCDC122Q5T0U0 273 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 C10orf76Q5T2E6 689 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 CCDC70Q6NSX1 233 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 WDR59Q6PJI9 974 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 LRRC55Q6ZSA7 311 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 STXBP4Q6ZWJ1 553 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 KCTD1Q719H9 257 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 FRMD5Q7Z6J6 570 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 SLC51AQ86UW1 340 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 SIAH1Q8IUQ4 282 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 OGFOD1Q8N543 542 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 RNF10Q8N5U6 811 aaKnown RBP9.2□□□□□ -0.94
SPG11-209ENST00000558253 SYT2Q8N9I0 419 aaPredicted RBP9.2□□□□□ -0.94
SPG11-209ENST00000558253 MTMR14Q8NCE2 650 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 MSANTD4Q8NCY6 345 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 TRIM58Q8NG06 486 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 NEK11Q8NG66 645 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 LRRC15Q8TF66 581 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 FAM151AQ8WW52 585 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 JAKMIP2Q96AA8 810 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 PSMD1Q99460 953 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 SLF1Q9BQI6 1058 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 DEFB129Q9H1M3 183 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 ACBD3Q9H3P7 528 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 DNAJC18Q9H819 358 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 DBNDD1Q9H9R9 158 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 METTL14Q9HCE5 456 aaKnown RBP9.2□□□□□ -0.94
SPG11-209ENST00000558253 KCNQ5Q9NR82 932 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 RNF14Q9UBS8 474 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 SEPT9Q9UHD8 586 aaPredicted RBP9.2□□□□□ -0.94
SPG11-209ENST00000558253 SIK3Q9Y2K2 1263 aa9.2□□□□□ -0.94
SPG11-209ENST00000558253 BZW2Q9Y6E2 419 aaKnown RBP9.2□□□□□ -0.94
SPG11-209ENST00000558253 V9GYY5 206 aaPredicted RBP9.2□□□□□ -0.94
SPG11-209ENST00000558253 TARSL2A2RTX5 802 aaKnown RBP9.19□□□□□ -0.94
SPG11-209ENST00000558253 RNF225M0QZC1 329 aaPredicted RBP9.19□□□□□ -0.94
SPG11-209ENST00000558253 FANCGO15287 622 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 CALUO43852 315 aaPredicted RBP9.19□□□□□ -0.94
SPG11-209ENST00000558253 TACC1O75410 805 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 EIF3JO75822 258 aaKnown RBP9.19□□□□□ -0.94
SPG11-209ENST00000558253 KRT18P05783 430 aaKnown RBP9.19□□□□□ -0.94
SPG11-209ENST00000558253 NFIL3Q16649 462 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 PTPN21Q16825 1174 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 MAP9Q49MG5 647 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 HERC4Q5GLZ8 1057 aaPredicted RBP9.19□□□□□ -0.94
SPG11-209ENST00000558253 CC2D1AQ6P1N0 951 aaPredicted RBP9.19□□□□□ -0.94
SPG11-209ENST00000558253 NUDT18Q6ZVK8 323 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 DYMQ7RTS9 669 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 TRAPPC11Q7Z392 1133 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 FAM83AQ86UY5 434 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 SLC35F6Q8N357 371 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 ACRBPQ8NEB7 543 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 ETNPPLQ8TBG4 499 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 NEK9Q8TD19 979 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 ZFRQ96KR1 1074 aaKnown RBP9.19□□□□□ -0.94
SPG11-209ENST00000558253 ALS2CR12Q96Q35 445 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 PURBQ96QR8 312 aaKnown RBP9.19□□□□□ -0.94
SPG11-209ENST00000558253 CHP1Q99653 195 aa9.19□□□□□ -0.94
SPG11-209ENST00000558253 PARD6BQ9BYG5 372 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms