RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 PALM3A6NDB9 673 aaPredicted RBP8.76□□□□□ -1.01
SPG11-205ENST00000558080 B4DLN1 442 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 TLR3O15455 904 aaKnown RBP8.76□□□□□ -1.01
SPG11-205ENST00000558080 CABYRO75952 493 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 CFBP00751 764 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 TIMP1P01033 207 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 MYL3P08590 195 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 MRPL12P52815 198 aaKnown RBP8.76□□□□□ -1.01
SPG11-205ENST00000558080 ANTXR2P58335 489 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 ITGA7Q13683 1181 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 PWP2Q15269 919 aaKnown RBP8.76□□□□□ -1.01
SPG11-205ENST00000558080 TMEM67Q5HYA8 995 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 PDXDC2PQ6P474 469 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 HOMER1Q86YM7 354 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 MCF2L2Q86YR7 1114 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 FAM126BQ8IXS8 530 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 OR6J1Q8NGC5 347 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 SYTL5Q8TDW5 730 aaPredicted RBP8.76□□□□□ -1.01
SPG11-205ENST00000558080 PPP1R13LQ8WUF5 828 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 PIBF1Q8WXW3 757 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 COPS5Q92905 334 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 FAM161BQ96MY7 647 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 RMDN3Q96TC7 470 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 PPP1R12CQ9BZL4 782 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 COL20A1Q9P218 1284 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 TBX21Q9UL17 535 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 GRIN2DO15399 1336 aa8.76□□□□□ -1.01
SPG11-205ENST00000558080 TANC1Q9C0D5 1861 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 PPP1R11O60927 126 aaPredicted RBP8.75□□□□□ -1.01
SPG11-205ENST00000558080 ARIH2O95376 493 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 CD4P01730 458 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 TXNP10599 105 aaKnown RBP8.75□□□□□ -1.01
SPG11-205ENST00000558080 EIF2AK2P19525 551 aaKnown RBP8.75□□□□□ -1.01
SPG11-205ENST00000558080 EDNRBP24530 442 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 CYP2C18P33260 490 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 CBLBQ13191 982 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 GRM4Q14833 912 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 SART3Q15020 963 aaKnown RBP8.75□□□□□ -1.01
SPG11-205ENST00000558080 PPP2R5BQ15173 497 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 SLC35G1Q2M3R5 365 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 ARHGEF16Q5VV41 709 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 SEPT14Q6ZU15 432 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 MB21D2Q8IYB1 491 aaPredicted RBP8.75□□□□□ -1.01
SPG11-205ENST00000558080 SLC43A3Q8NBI5 491 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 IGDCC4Q8TDY8 1250 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 NSUN6Q8TEA1 469 aaKnown RBP8.75□□□□□ -1.01
SPG11-205ENST00000558080 SCFD2Q8WU76 684 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 RNPC3Q96LT9 517 aaKnown RBP8.75□□□□□ -1.01
SPG11-205ENST00000558080 PIGSQ96S52 555 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 ESYT1Q9BSJ8 1104 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 AMNQ9BXJ7 453 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 LSG1Q9H089 658 aaKnown RBP8.75□□□□□ -1.01
SPG11-205ENST00000558080 TRPV6Q9H1D0 765 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 POLR3EQ9NVU0 708 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 MTMR10Q9NXD2 777 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 CDV3Q9UKY7 258 aaKnown RBP8.75□□□□□ -1.01
SPG11-205ENST00000558080 LOXHD1Q8IVV2 1947 aa8.75□□□□□ -1.01
SPG11-205ENST00000558080 PTPRSQ13332 1948 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 WDR81Q562E7 1941 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 OPLAHO14841 1288 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 SLC27A2O14975 620 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 ZBTB5O15062 677 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 NKRFO15226 690 aaKnown RBP eCLIP8.74□□□□□ -1.01
SPG11-205ENST00000558080 ACRP10323 421 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 CSF2RAP15509 400 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 CPT1AP50416 773 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 CHMP4BP1P59074 171 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 PURAQ00577 322 aaKnown RBP8.74□□□□□ -1.01
SPG11-205ENST00000558080 PPIGQ13427 754 aaKnown RBP eCLIP8.74□□□□□ -1.01
SPG11-205ENST00000558080 COL9A3Q14050 684 aaPredicted RBP8.74□□□□□ -1.01
SPG11-205ENST00000558080 TTLL4Q14679 1199 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 LY6KQ17RY6 165 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 MFSD5Q6N075 450 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 CATIPQ7Z7H3 387 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 TMEM199Q8N511 208 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 CCDC155Q8N6L0 562 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 MTMR8Q96EF0 704 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 CNTNAP3BQ96NU0 1288 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.74□□□□□ -1.01
SPG11-205ENST00000558080 MYL10Q9BUA6 226 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 BACH2Q9BYV9 841 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 CNTNAP3Q9BZ76 1288 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 RIOX1Q9H6W3 641 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 PCDHA1Q9Y5I3 950 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 UMODL1Q5DID0 1318 aa8.74□□□□□ -1.01
SPG11-205ENST00000558080 PNMA6FA0A0J9YX94 578 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 PRC1O43663 620 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 CYTH3O43739 400 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 B4GALT4O60513 344 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 MYCLP12524 364 aaPredicted RBP8.73□□□□□ -1.01
SPG11-205ENST00000558080 HOXA13P31271 388 aaPredicted RBP8.73□□□□□ -1.01
SPG11-205ENST00000558080 HSD17B4P51659 736 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 CCL23P55773 120 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 TROAPQ12815 778 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 STXBP2Q15833 593 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 NBPF20Q3BBV1 942 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 BRDTQ58F21 947 aaPredicted RBP8.73□□□□□ -1.01
SPG11-205ENST00000558080 FAM47CQ5HY64 1035 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 TMEM240Q5SV17 173 aa8.73□□□□□ -1.01
SPG11-205ENST00000558080 CREB3L3Q68CJ9 461 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms