RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 SLC5A6Q9Y289 635 aa6.91□□□□□ -1.3
HNRNPC-233ENST00000557768 LAMB1P07942 1786 aa6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 WTIPA6NIX2 430 aaPredicted RBP6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 TLR3O15455 904 aaKnown RBP6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 PGRP06401 933 aa6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 IBSPP21815 317 aaPredicted RBP6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 CRKP46108 304 aa6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 OXCT1P55809 520 aa6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 ZNF280AP59817 542 aaPredicted RBP6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 IGBP1P78318 339 aa6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 SEZ6Q53EL9 994 aa6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 RNF187Q5TA31 235 aaPredicted RBP6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 ZNF574Q6ZN55 896 aaPredicted RBP6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 CCDC81Q6ZN84 652 aa6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 NFXL1Q6ZNB6 911 aa6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 CCDC84Q86UT8 332 aaPredicted RBP6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 RASAL3Q86YV0 1011 aa6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 ABI1Q8IZP0 508 aa6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 FBXO27Q8NI29 283 aa6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 BCL7CQ8WUZ0 217 aaPredicted RBP6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 GATAD2BQ8WXI9 593 aa6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 RNPC3Q96LT9 517 aaKnown RBP6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 DEPDC7Q96QD5 511 aa6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 MIPEPQ99797 713 aa6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 MYD88Q99836 296 aa6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 PHAXQ9H814 394 aaKnown RBP6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 SNTG2Q9NY99 539 aa6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 GTF2IRD1Q9UHL9 959 aa6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 CORINQ9Y5Q5 1042 aa6.9□□□□□ -1.3
HNRNPC-233ENST00000557768 CACNA1FO60840 1977 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 hCG_2014768A0A024R1R8 64 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 UBE2Q2LH0YL09 131 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 RBAK-RBAKDNI3L0D1 243 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 ELL2O00472 640 aaPredicted RBP6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 SMAD7O15105 426 aaKnown RBP6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 BPNT1O95861 308 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 EOMESO95936 686 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 CEACAM5P06731 702 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 HOXB7P09629 217 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 MCM4P33991 863 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 CHMP4BP1P59074 171 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 WDR43Q15061 677 aaKnown RBP eCLIP6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 RALBP1Q15311 655 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 CCDC152Q4G0S7 254 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 PRAMEF18Q5VWM3 479 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 PRAMEF13Q5VWM6 474 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 FBXW10Q5XX13 1052 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 CTU1Q7Z7A3 348 aaKnown RBP6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 SLITRK4Q8IW52 837 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 ZBTB38Q8NAP3 1195 aaPredicted RBP6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 AGBL3Q8NEM8 1001 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 RUNDC1Q96C34 613 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 GPATCH3Q96I76 525 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 DPH2Q9BQC3 489 aaPredicted RBP6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 MXD3Q9BW11 206 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 MYOZ2Q9NPC6 264 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 TPX2Q9ULW0 747 aaKnown RBP6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 PPT2Q9UMR5 302 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 PLAGL2Q9UPG8 496 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 ZNF609O15014 1411 aa6.89□□□□□ -1.31
HNRNPC-233ENST00000557768 RBBP6Q7Z6E9 1792 aaKnown RBP6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 XDHP47989 1333 aa6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 MYBBP1AQ9BQG0 1328 aaKnown RBP6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 FAM221BA6H8Z2 402 aa6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 PDE8AO60658 829 aa6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 SLITRK5O94991 958 aa6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 TBC1D8O95759 1140 aa6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 PCCAP05165 728 aaPredicted RBP6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 IFI16Q16666 785 aaKnown RBP6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 NBPF9Q3BBW0 867 aa6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 TNNI3KQ59H18 835 aa6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 FAM214BQ7L5A3 538 aa6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 SPRED2Q7Z698 418 aa6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 ANKRD18AQ8IVF6 992 aa6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 STK11IPQ8N1F8 1099 aa6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 SHDQ96IW2 340 aa6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 FERD3LQ96RJ6 166 aa6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 CRBNQ96SW2 442 aa6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 MKNK2Q9HBH9 465 aa6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 PAK6Q9NQU5 681 aaPredicted RBP6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 PRDM5Q9NQX1 630 aaPredicted RBP6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 CWC25Q9NXE8 425 aaPredicted RBP6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 TJP2Q9UDY2 1190 aa6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 POLR3KQ9Y2Y1 108 aaPredicted RBP6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 OTOFQ9HC10 1997 aa6.88□□□□□ -1.31
HNRNPC-233ENST00000557768 TMEM265A0A087WTH1 108 aa6.87□□□□□ -1.31
HNRNPC-233ENST00000557768 ENPP3O14638 875 aa6.87□□□□□ -1.31
HNRNPC-233ENST00000557768 SASH1O94885 1247 aa6.87□□□□□ -1.31
HNRNPC-233ENST00000557768 CST3P01034 146 aaPredicted RBP6.87□□□□□ -1.31
HNRNPC-233ENST00000557768 CD96P40200 585 aa6.87□□□□□ -1.31
HNRNPC-233ENST00000557768 FKBP1BP68106 108 aa6.87□□□□□ -1.31
HNRNPC-233ENST00000557768 PDE4BQ07343 736 aa6.87□□□□□ -1.31
HNRNPC-233ENST00000557768 DDX10Q13206 875 aaKnown RBP6.87□□□□□ -1.31
HNRNPC-233ENST00000557768 MFSD2AQ8NA29 543 aa6.87□□□□□ -1.31
HNRNPC-233ENST00000557768 CCDC191Q8NCU4 936 aa6.87□□□□□ -1.31
HNRNPC-233ENST00000557768 RIN3Q8TB24 985 aa6.87□□□□□ -1.31
HNRNPC-233ENST00000557768 MISP3Q96FF7 219 aa6.87□□□□□ -1.31
HNRNPC-233ENST00000557768 HDAC9Q9UKV0 1011 aa6.87□□□□□ -1.31
HNRNPC-233ENST00000557768 TACC3Q9Y6A5 838 aa6.87□□□□□ -1.31
HNRNPC-233ENST00000557768 MED23Q9ULK4 1368 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms