RNA–Protein interactions for RNA: ENST00000557764.5

TRAPPC6B-207, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 2

Gene TRAPPC6B, Length 870 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-207ENST00000557764 SYTL5Q8TDW5 730 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC6B-207ENST00000557764 RMDN3Q96TC7 470 aa16.82■□□□□ 0.28
TRAPPC6B-207ENST00000557764 RNPEPQ9H4A4 650 aa16.82■□□□□ 0.28
TRAPPC6B-207ENST00000557764 COL20A1Q9P218 1284 aa16.82■□□□□ 0.28
TRAPPC6B-207ENST00000557764 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.82■□□□□ 0.28
TRAPPC6B-207ENST00000557764 RANBP6O60518 1105 aaKnown RBP16.81■□□□□ 0.28
TRAPPC6B-207ENST00000557764 BRD1O95696 1058 aa16.81■□□□□ 0.28
TRAPPC6B-207ENST00000557764 CTDSPL2Q05D32 466 aa16.81■□□□□ 0.28
TRAPPC6B-207ENST00000557764 KIAA2013Q8IYS2 634 aa16.81■□□□□ 0.28
TRAPPC6B-207ENST00000557764 ATP8B4Q8TF62 1192 aa16.81■□□□□ 0.28
TRAPPC6B-207ENST00000557764 SPATA33Q96N06 139 aa16.81■□□□□ 0.28
TRAPPC6B-207ENST00000557764 NEK1Q96PY6 1258 aa16.81■□□□□ 0.28
TRAPPC6B-207ENST00000557764 SORCS3Q9UPU3 1222 aa16.81■□□□□ 0.28
TRAPPC6B-207ENST00000557764 CEP250Q9BV73 2442 aa16.8■□□□□ 0.28
TRAPPC6B-207ENST00000557764 H3BRB1 525 aa16.8■□□□□ 0.28
TRAPPC6B-207ENST00000557764 EIF2AK2P19525 551 aaKnown RBP16.8■□□□□ 0.28
TRAPPC6B-207ENST00000557764 PUM1Q14671 1186 aaKnown RBP eCLIP16.8■□□□□ 0.28
TRAPPC6B-207ENST00000557764 FAM26DQ5JW98 314 aa16.8■□□□□ 0.28
TRAPPC6B-207ENST00000557764 CELF3Q5SZQ8 465 aaKnown RBP16.8■□□□□ 0.28
TRAPPC6B-207ENST00000557764 ARHGEF16Q5VV41 709 aa16.8■□□□□ 0.28
TRAPPC6B-207ENST00000557764 KCNG4Q8TDN1 519 aa16.8■□□□□ 0.28
TRAPPC6B-207ENST00000557764 MICAL1Q8TDZ2 1067 aa16.8■□□□□ 0.28
TRAPPC6B-207ENST00000557764 TMEM47Q9BQJ4 181 aa16.8■□□□□ 0.28
TRAPPC6B-207ENST00000557764 MFSD1Q9H3U5 465 aa16.8■□□□□ 0.28
TRAPPC6B-207ENST00000557764 SMOC2Q9H3U7 446 aa16.8■□□□□ 0.28
TRAPPC6B-207ENST00000557764 TUT1Q9H6E5 874 aaKnown RBP16.8■□□□□ 0.28
TRAPPC6B-207ENST00000557764 TSHZ2Q9NRE2 1034 aa16.8■□□□□ 0.28
TRAPPC6B-207ENST00000557764 KAT6AQ92794 2004 aa16.79■□□□□ 0.28
TRAPPC6B-207ENST00000557764 PPFIA3O75145 1194 aa16.79■□□□□ 0.28
TRAPPC6B-207ENST00000557764 ZFYP08048 801 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC6B-207ENST00000557764 GHRP10912 638 aa16.79■□□□□ 0.28
TRAPPC6B-207ENST00000557764 PDHBP11177 359 aa16.79■□□□□ 0.28
TRAPPC6B-207ENST00000557764 TOP1P11387 765 aaKnown RBP16.79■□□□□ 0.28
TRAPPC6B-207ENST00000557764 CLCN5P51795 746 aa16.79■□□□□ 0.28
TRAPPC6B-207ENST00000557764 APOL5Q9BWW9 433 aa16.79■□□□□ 0.28
TRAPPC6B-207ENST00000557764 S1PR5Q9H228 398 aa16.79■□□□□ 0.28
TRAPPC6B-207ENST00000557764 SETD4Q9NVD3 440 aa16.79■□□□□ 0.28
TRAPPC6B-207ENST00000557764 BAHCC1Q9P281 2608 aa16.78■□□□□ 0.28
TRAPPC6B-207ENST00000557764 HMMRO75330 724 aa16.78■□□□□ 0.28
TRAPPC6B-207ENST00000557764 GGPS1O95749 300 aa16.78■□□□□ 0.28
TRAPPC6B-207ENST00000557764 CHRNA1P02708 482 aa16.78■□□□□ 0.28
TRAPPC6B-207ENST00000557764 NR3C2P08235 984 aa16.78■□□□□ 0.28
TRAPPC6B-207ENST00000557764 CMTR2Q8IYT2 770 aaKnown RBP16.78■□□□□ 0.28
TRAPPC6B-207ENST00000557764 SEC62Q99442 399 aaKnown RBP16.78■□□□□ 0.28
TRAPPC6B-207ENST00000557764 MAF1Q9H063 256 aa16.78■□□□□ 0.28
TRAPPC6B-207ENST00000557764 NR2E1Q9Y466 385 aa16.78■□□□□ 0.28
TRAPPC6B-207ENST00000557764 CHD6Q8TD26 2715 aa16.78■□□□□ 0.28
TRAPPC6B-207ENST00000557764 MYH6P13533 1939 aa16.77■□□□□ 0.28
TRAPPC6B-207ENST00000557764 GNAT1P11488 350 aa16.77■□□□□ 0.28
TRAPPC6B-207ENST00000557764 TECP42680 631 aa16.77■□□□□ 0.28
TRAPPC6B-207ENST00000557764 ZNF543Q08ER8 600 aa16.77■□□□□ 0.28
TRAPPC6B-207ENST00000557764 DUSP6Q16828 381 aa16.77■□□□□ 0.28
TRAPPC6B-207ENST00000557764 PAN2Q504Q3 1202 aaKnown RBP16.77■□□□□ 0.28
TRAPPC6B-207ENST00000557764 SIRT2Q8IXJ6 389 aa16.77■□□□□ 0.28
TRAPPC6B-207ENST00000557764 EHMT1Q9H9B1 1298 aa16.77■□□□□ 0.28
TRAPPC6B-207ENST00000557764 PXMP2Q9NR77 195 aa16.77■□□□□ 0.28
TRAPPC6B-207ENST00000557764 ABCB11O95342 1321 aa16.76■□□□□ 0.27
TRAPPC6B-207ENST00000557764 LMNAP02545 664 aaKnown RBP16.76■□□□□ 0.27
TRAPPC6B-207ENST00000557764 LGALS2P05162 132 aa16.76■□□□□ 0.27
TRAPPC6B-207ENST00000557764 SP2Q02086 613 aa16.76■□□□□ 0.27
TRAPPC6B-207ENST00000557764 LPIN1Q14693 890 aa16.76■□□□□ 0.27
TRAPPC6B-207ENST00000557764 ANGPT1Q15389 498 aa16.76■□□□□ 0.27
TRAPPC6B-207ENST00000557764 ANKRD54Q6NXT1 300 aa16.76■□□□□ 0.27
TRAPPC6B-207ENST00000557764 MCF2L2Q86YR7 1114 aa16.76■□□□□ 0.27
TRAPPC6B-207ENST00000557764 FLCNQ8NFG4 579 aa16.76■□□□□ 0.27
TRAPPC6B-207ENST00000557764 CDCA3Q99618 268 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC6B-207ENST00000557764 ECHDC1Q9NTX5 307 aa16.76■□□□□ 0.27
TRAPPC6B-207ENST00000557764 SUPT16HQ9Y5B9 1047 aaKnown RBP16.76■□□□□ 0.27
TRAPPC6B-207ENST00000557764 FSD2A1L4K1 749 aa16.75■□□□□ 0.27
TRAPPC6B-207ENST00000557764 SRGAP2BP0DMP2 458 aa16.75■□□□□ 0.27
TRAPPC6B-207ENST00000557764 MYCLP12524 364 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC6B-207ENST00000557764 ARHGAP4P98171 946 aa16.75■□□□□ 0.27
TRAPPC6B-207ENST00000557764 SYCE2Q6PIF2 218 aa16.75■□□□□ 0.27
TRAPPC6B-207ENST00000557764 KCNV1Q6PIU1 500 aa16.75■□□□□ 0.27
TRAPPC6B-207ENST00000557764 CPVLQ9H3G5 476 aa16.75■□□□□ 0.27
TRAPPC6B-207ENST00000557764 MLXIPQ9HAP2 919 aa16.75■□□□□ 0.27
TRAPPC6B-207ENST00000557764 SPTBN2O15020 2390 aa16.74■□□□□ 0.27
TRAPPC6B-207ENST00000557764 MAP1BP46821 2468 aaKnown RBP16.74■□□□□ 0.27
TRAPPC6B-207ENST00000557764 C2CD4DB7Z1M9 353 aa16.74■□□□□ 0.27
TRAPPC6B-207ENST00000557764 SMARCA5O60264 1052 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC6B-207ENST00000557764 UBA1P22314 1058 aaKnown RBP16.74■□□□□ 0.27
TRAPPC6B-207ENST00000557764 CWF19L1Q69YN2 538 aaKnown RBP16.74■□□□□ 0.27
TRAPPC6B-207ENST00000557764 TMEM184AQ6ZMB5 413 aa16.74■□□□□ 0.27
TRAPPC6B-207ENST00000557764 PANK1Q8TE04 598 aa16.74■□□□□ 0.27
TRAPPC6B-207ENST00000557764 SPOCK2Q92563 424 aa16.74■□□□□ 0.27
TRAPPC6B-207ENST00000557764 UBA5Q9GZZ9 404 aa16.74■□□□□ 0.27
TRAPPC6B-207ENST00000557764 DLL3Q9NYJ7 618 aa16.74■□□□□ 0.27
TRAPPC6B-207ENST00000557764 CDH22Q9UJ99 828 aa16.74■□□□□ 0.27
TRAPPC6B-207ENST00000557764 CCDC171Q6TFL3 1326 aa16.73■□□□□ 0.27
TRAPPC6B-207ENST00000557764 PI15O43692 258 aa16.73■□□□□ 0.27
TRAPPC6B-207ENST00000557764 ORC4O43929 436 aa16.73■□□□□ 0.27
TRAPPC6B-207ENST00000557764 ASGR2P07307 311 aa16.73■□□□□ 0.27
TRAPPC6B-207ENST00000557764 GOLGA8HP0CJ92 632 aa16.73■□□□□ 0.27
TRAPPC6B-207ENST00000557764 ARP10275 920 aa16.73■□□□□ 0.27
TRAPPC6B-207ENST00000557764 HSPD1P10809 573 aaKnown RBP16.73■□□□□ 0.27
TRAPPC6B-207ENST00000557764 ERVFC1P60507 584 aa16.73■□□□□ 0.27
TRAPPC6B-207ENST00000557764 ADAM17P78536 824 aa16.73■□□□□ 0.27
TRAPPC6B-207ENST00000557764 UBE3AQ05086 875 aa16.73■□□□□ 0.27
TRAPPC6B-207ENST00000557764 KCNC3Q14003 757 aa16.73■□□□□ 0.27
TRAPPC6B-207ENST00000557764 CDC37Q16543 378 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms