RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 HACL1Q9UJ83 578 aa9.05□□□□□ -0.96
CHD8-213ENST00000557364 QRICH2Q9H0J4 1663 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 PDIA3P30101 505 aaKnown RBP9.04□□□□□ -0.96
CHD8-213ENST00000557364 MXI1P50539 228 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 SNAPC2Q13487 334 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 THOC5Q13769 683 aaKnown RBP9.04□□□□□ -0.96
CHD8-213ENST00000557364 GCOM2Q9BZD3 368 aaPredicted RBP9.04□□□□□ -0.96
CHD8-213ENST00000557364 TRIM45Q9H8W5 580 aaPredicted RBP9.04□□□□□ -0.96
CHD8-213ENST00000557364 FAN1Q9Y2M0 1017 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 PRDM15P57071 1507 aaPredicted RBP9.04□□□□□ -0.96
CHD8-213ENST00000557364 UTYO14607 1347 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 KIF3CO14782 793 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 ZBTB5O15062 677 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 SART1O43290 800 aaKnown RBP9.04□□□□□ -0.96
CHD8-213ENST00000557364 EVI5O60447 810 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 MOCS3O95396 460 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 INHBAP08476 426 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 GOLGA8HP0CJ92 632 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 CYP4A11Q02928 519 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 DBN1Q16643 649 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 ME3Q16798 604 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 GJA10Q969M2 543 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 ZNRF3Q9ULT6 936 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 ABCB4P21439 1286 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 STX2P32856 288 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 ZNF131P52739 623 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 Q3C1V9 767 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 ZNF667Q5HYK9 610 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 ARHGEF18Q6ZSZ5 1173 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 TBCKQ8TEA7 893 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 VPS39Q96JC1 886 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 MSTO1Q9BUK6 570 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 DAAM1Q9Y4D1 1078 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 SPATA31E1Q6ZUB1 1445 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 STX1BP61266 288 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 SLC39A14Q15043 492 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 YAF2Q8IY57 180 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 RAB42Q8N4Z0 105 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 HDAC11Q96DB2 347 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 IPO5O00410 1097 aaKnown RBP9.04□□□□□ -0.96
CHD8-213ENST00000557364 TWF2Q6IBS0 349 aaKnown RBP9.04□□□□□ -0.96
CHD8-213ENST00000557364 RFX6Q8HWS3 928 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 FAM71BQ8TC56 605 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 TMCC1O94876 653 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 CHEK2O96017 543 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 MAPK4P31152 587 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 ZNF445P59923 1031 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 KRT71Q3SY84 523 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 NUDCD1Q96RS6 583 aa9.04□□□□□ -0.96
CHD8-213ENST00000557364 DBNLQ9UJU6 430 aaKnown RBP9.04□□□□□ -0.96
CHD8-213ENST00000557364 SASH1O94885 1247 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 HOXC6P09630 235 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 PMLP29590 882 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 BRD3Q15059 726 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 MTERF2Q49AM1 385 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 PROM2Q8N271 834 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 EPS15L1Q9UBC2 864 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 KCNK3O14649 394 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 CPP00450 1065 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 CPA1P15085 419 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 HPDP32754 393 aaPredicted RBP9.03□□□□□ -0.96
CHD8-213ENST00000557364 KIAA1755Q5JYT7 1200 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 PGBD4Q96DM1 585 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 ZNF560Q96MR9 790 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 CBX8Q9HC52 389 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 DDX41Q9UJV9 622 aaKnown RBP9.03□□□□□ -0.96
CHD8-213ENST00000557364 SRPRBQ9Y5M8 271 aaKnown RBP9.03□□□□□ -0.96
CHD8-213ENST00000557364 RNASE9P60153 205 aaKnown RBP9.03□□□□□ -0.96
CHD8-213ENST00000557364 ZNF658Q5TYW1 1059 aaPredicted RBP9.03□□□□□ -0.96
CHD8-213ENST00000557364 P2RX5Q93086 422 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 KLHL14Q9P2G3 628 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 SLC13A4Q9UKG4 626 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 GLI2P10070 1586 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 CLDN3O15551 220 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 MGEA5O60502 916 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 TTC4O95801 387 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 ACTN1P12814 892 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 POLR2FP61218 127 aaKnown RBP9.03□□□□□ -0.96
CHD8-213ENST00000557364 PNOCQ13519 176 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 STAG1Q8WVM7 1258 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 CNOT6LQ96LI5 555 aaKnown RBP9.03□□□□□ -0.96
CHD8-213ENST00000557364 DIS3Q9Y2L1 958 aaKnown RBP9.03□□□□□ -0.96
CHD8-213ENST00000557364 hCG_1642624A0A1W2PR95 340 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 CARNS1A5YM72 827 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 NDUFAB1O14561 156 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 CLCN1P35523 988 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 MIGA2Q7L4E1 593 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 TRERF1Q96PN7 1200 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 CLTCQ00610 1675 aaKnown RBP9.03□□□□□ -0.96
CHD8-213ENST00000557364 CALB1P05937 261 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 ADD1P35611 737 aaKnown RBP9.03□□□□□ -0.96
CHD8-213ENST00000557364 ATP6V1E2Q96A05 226 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 NLRP4Q96MN2 994 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 TUBGCP2Q9BSJ2 902 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 ORC6Q9Y5N6 252 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 MROH7-TTC4A0A0A0MT08 1334 aa9.03□□□□□ -0.96
CHD8-213ENST00000557364 TNPO2O14787 897 aaKnown RBP9.02□□□□□ -0.96
CHD8-213ENST00000557364 JAK2O60674 1132 aa9.02□□□□□ -0.96
CHD8-213ENST00000557364 PPFIA2O75334 1257 aa9.02□□□□□ -0.96
CHD8-213ENST00000557364 GPC4O75487 556 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms