RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PI4KAP2A4QPH2 592 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 SYNCRIPO60506 623 aaKnown RBP9.47□□□□□ -0.89
SYNE3-205ENST00000557275 TJP3O95049 919 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 TNFAIP1Q13829 316 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 EXOC3L4Q17RC7 722 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 TPTE2Q6XPS3 522 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 PI4KAP1Q8N8J0 262 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 TTC13Q8NBP0 860 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 STON1Q9Y6Q2 735 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 SNX2O60749 519 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 KRT6AP02538 564 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 KRT6BP04259 564 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 GAP43P17677 238 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 KRT6CP48668 564 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 PSMB7Q99436 277 aa9.47□□□□□ -0.89
SYNE3-205ENST00000557275 MICALL2Q8IY33 904 aa9.46□□□□□ -0.89
SYNE3-205ENST00000557275 TTC8Q8TAM2 541 aa9.46□□□□□ -0.89
SYNE3-205ENST00000557275 ERAP1Q9NZ08 941 aa9.46□□□□□ -0.89
SYNE3-205ENST00000557275 MYO18AQ92614 2054 aaKnown RBP9.46□□□□□ -0.89
SYNE3-205ENST00000557275 KLHL12Q53G59 568 aa9.46□□□□□ -0.89
SYNE3-205ENST00000557275 PPP1R13BQ96KQ4 1090 aa9.46□□□□□ -0.89
SYNE3-205ENST00000557275 ZNF711Q9Y462 761 aa9.46□□□□□ -0.89
SYNE3-205ENST00000557275 MECOMQ03112 1051 aa9.46□□□□□ -0.89
SYNE3-205ENST00000557275 KPNB1Q14974 876 aaKnown RBP9.46□□□□□ -0.89
SYNE3-205ENST00000557275 FAM178BQ8IXR5 827 aa9.46□□□□□ -0.89
SYNE3-205ENST00000557275 SNX25Q9H3E2 840 aa9.46□□□□□ -0.89
SYNE3-205ENST00000557275 TRAF3IP3Q9Y228 551 aa9.46□□□□□ -0.89
SYNE3-205ENST00000557275 FAM32AQ9Y421 112 aaKnown RBP9.46□□□□□ -0.89
SYNE3-205ENST00000557275 HSPA9P38646 679 aaKnown RBP9.46□□□□□ -0.89
SYNE3-205ENST00000557275 SLC1A4P43007 532 aa9.46□□□□□ -0.89
SYNE3-205ENST00000557275 KRT76Q01546 638 aa9.46□□□□□ -0.89
SYNE3-205ENST00000557275 DAB2IPQ5VWQ8 1189 aa9.46□□□□□ -0.89
SYNE3-205ENST00000557275 ANKS3Q6ZW76 656 aa9.46□□□□□ -0.89
SYNE3-205ENST00000557275 CMTM5Q96DZ9 223 aa9.46□□□□□ -0.89
SYNE3-205ENST00000557275 BRD1O95696 1058 aa9.46□□□□□ -0.89
SYNE3-205ENST00000557275 ARHGEF3Q9NR81 526 aa9.46□□□□□ -0.89
SYNE3-205ENST00000557275 IL1RAPL1Q9NZN1 696 aa9.46□□□□□ -0.89
SYNE3-205ENST00000557275 SLC4A1P02730 911 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 ABCB4P21439 1286 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 NUDT16Q96DE0 195 aaKnown RBP9.46□□□□□ -0.9
SYNE3-205ENST00000557275 HPS5Q9UPZ3 1129 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 TRAPPC10P48553 1259 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 TSTA3Q13630 321 aaPredicted RBP9.46□□□□□ -0.9
SYNE3-205ENST00000557275 PRR23AA6NEV1 266 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 ARIH2O95376 493 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 LAMB3Q13751 1172 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 SH3GL1Q99961 368 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 CYP26B1Q9NR63 512 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 TRIM13O60858 407 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 NCKAP1LP55160 1127 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 E2F5Q15329 346 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 PYROXD1Q8WU10 500 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 TARSL2A2RTX5 802 aaKnown RBP9.46□□□□□ -0.9
SYNE3-205ENST00000557275 TLR3O15455 904 aaKnown RBP9.46□□□□□ -0.9
SYNE3-205ENST00000557275 COPS2P61201 443 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 AGBL1Q96MI9 1066 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 ASAP2O43150 1006 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 IMPG1Q17R60 797 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 ATAD3BQ5T9A4 648 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 ARMCX2Q7L311 632 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 CCDC134Q9H6E4 229 aa9.46□□□□□ -0.9
SYNE3-205ENST00000557275 VPS50Q96JG6 964 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 FAM193BQ96PV7 902 aaPredicted RBP9.45□□□□□ -0.9
SYNE3-205ENST00000557275 FAM129AQ9BZQ8 928 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 TMED2Q15363 201 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 PASD1Q8IV76 773 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 AHI1Q8N157 1196 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 TBC1D22AQ8WUA7 517 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 MOV10L1Q9BXT6 1211 aaKnown RBP9.45□□□□□ -0.9
SYNE3-205ENST00000557275 CFTRP13569 1480 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 RSRC2Q7L4I2 434 aaKnown RBP9.45□□□□□ -0.9
SYNE3-205ENST00000557275 MYLK2Q9H1R3 596 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 ATP8A2Q9NTI2 1148 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 WDR17Q8IZU2 1322 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 ANP32DO95626 131 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 UTP6Q9NYH9 597 aaKnown RBP9.45□□□□□ -0.9
SYNE3-205ENST00000557275 SOX13Q9UN79 622 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 SP100P23497 879 aaPredicted RBP9.45□□□□□ -0.9
SYNE3-205ENST00000557275 ZBED4O75132 1171 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 PABPC4Q13310 644 aaKnown RBP eCLIP9.45□□□□□ -0.9
SYNE3-205ENST00000557275 PICALMQ13492 652 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 CCDC142Q17RM4 750 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 SPOUT1Q5T280 376 aaKnown RBP9.45□□□□□ -0.9
SYNE3-205ENST00000557275 RHOT2Q8IXI1 618 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 TTC39CQ8N584 583 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 TSSK1BQ9BXA7 367 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 SNAP25P60880 206 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 TRIP4Q15650 581 aaPredicted RBP9.45□□□□□ -0.9
SYNE3-205ENST00000557275 ARMCX4Q5H9R4 360 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 E4F1Q66K89 784 aaPredicted RBP9.45□□□□□ -0.9
SYNE3-205ENST00000557275 SLFN12LQ6IEE8 588 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 LINS1Q8NG48 757 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 ANKRD36BP1Q96IX9 119 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 PRPF18Q99633 342 aaKnown RBP9.45□□□□□ -0.9
SYNE3-205ENST00000557275 PRRG3Q9BZD7 231 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 SUGT1Q9Y2Z0 365 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 STRNO43815 780 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 GUCA1CO95843 209 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 TCP11X2Q5H9J9 407 aa9.45□□□□□ -0.9
SYNE3-205ENST00000557275 GCNAQ96QF7 691 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms