RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 TCF7P36402 384 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-227ENST00000557269 KRT76Q01546 638 aa14.46□□□□□ -0.09
SHMT2-227ENST00000557269 PPP2R5CQ13362 524 aa14.46□□□□□ -0.09
SHMT2-227ENST00000557269 SLC39A14Q15043 492 aa14.46□□□□□ -0.09
SHMT2-227ENST00000557269 ZNF746Q6NUN9 644 aaPredicted RBP14.46□□□□□ -0.09
SHMT2-227ENST00000557269 ABHD15Q6UXT9 468 aa14.46□□□□□ -0.09
SHMT2-227ENST00000557269 TRIM50Q86XT4 487 aa14.46□□□□□ -0.09
SHMT2-227ENST00000557269 TNS4Q8IZW8 715 aa14.46□□□□□ -0.09
SHMT2-227ENST00000557269 LINC00301Q8NCQ3 95 aa14.46□□□□□ -0.09
SHMT2-227ENST00000557269 SEPT1Q8WYJ6 367 aa14.46□□□□□ -0.09
SHMT2-227ENST00000557269 TMEM106CQ9BVX2 250 aa14.46□□□□□ -0.09
SHMT2-227ENST00000557269 POTEMA6NI47 508 aa14.45□□□□□ -0.1
SHMT2-227ENST00000557269 LAD1O00515 517 aa14.45□□□□□ -0.1
SHMT2-227ENST00000557269 NOP56O00567 594 aaKnown RBP14.45□□□□□ -0.1
SHMT2-227ENST00000557269 MYL3P08590 195 aa14.45□□□□□ -0.1
SHMT2-227ENST00000557269 ZNF286BP0CG31 522 aa14.45□□□□□ -0.1
SHMT2-227ENST00000557269 PRPHP41219 470 aa14.45□□□□□ -0.1
SHMT2-227ENST00000557269 CPT1AP50416 773 aa14.45□□□□□ -0.1
SHMT2-227ENST00000557269 FXR2P51116 673 aaKnown RBP eCLIP14.45□□□□□ -0.1
SHMT2-227ENST00000557269 PURAQ00577 322 aaKnown RBP14.45□□□□□ -0.1
SHMT2-227ENST00000557269 UTP14CQ5TAP6 766 aaKnown RBP14.45□□□□□ -0.1
SHMT2-227ENST00000557269 NCAPH2Q6IBW4 605 aa14.45□□□□□ -0.1
SHMT2-227ENST00000557269 CXCL17Q6UXB2 119 aa14.45□□□□□ -0.1
SHMT2-227ENST00000557269 RNF180Q86T96 592 aa14.45□□□□□ -0.1
SHMT2-227ENST00000557269 ARRDC4Q8NCT1 418 aa14.45□□□□□ -0.1
SHMT2-227ENST00000557269 DIS3LQ8TF46 1054 aaKnown RBP14.45□□□□□ -0.1
SHMT2-227ENST00000557269 PPP1R13LQ8WUF5 828 aa14.45□□□□□ -0.1
SHMT2-227ENST00000557269 KAT2BQ92831 832 aa14.45□□□□□ -0.1
SHMT2-227ENST00000557269 TNPO1Q92973 898 aaKnown RBP14.45□□□□□ -0.1
SHMT2-227ENST00000557269 C16orf70Q9BSU1 422 aa14.45□□□□□ -0.1
SHMT2-227ENST00000557269 SPC25Q9HBM1 224 aa14.45□□□□□ -0.1
SHMT2-227ENST00000557269 DISC1Q9NRI5 854 aa14.45□□□□□ -0.1
SHMT2-227ENST00000557269 FBXO2Q9UK22 296 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-227ENST00000557269 IGKV6D-21A0A0A0MT36 114 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 VWA3AA6NCI4 1184 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 PP2D1A8MPX8 630 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 DNM1LO00429 736 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 PPFIA4O75335 1185 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 BMP15O95972 392 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 LGALS2P05162 132 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 ASGR1P07306 291 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 SUPT20HL2P0C7V6 817 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 NCLP19338 710 aaKnown RBP14.44□□□□□ -0.1
SHMT2-227ENST00000557269 CDC25AP30304 524 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 ACLYP53396 1101 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 STK38Q15208 465 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 UGCGQ16739 394 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 DGKDQ16760 1214 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 ARL6IP4Q66PJ3 421 aaKnown RBP14.44□□□□□ -0.1
SHMT2-227ENST00000557269 ATL3Q6DD88 541 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 SWSAP1Q6NVH7 229 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 DTHD1Q6ZMT9 781 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 MIER3Q7Z3K6 550 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 CCDC60Q8IWA6 550 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-227ENST00000557269 FERMT2Q96AC1 680 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 CLIC6Q96NY7 704 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 GDPD2Q9HCC8 539 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 RGL1Q9NZL6 768 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 RCOR1Q9UKL0 485 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 CEP131Q9UPN4 1083 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 PCDHA10Q9Y5I2 948 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 ATP6V1DQ9Y5K8 247 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 BRCA2P51587 3418 aa14.44□□□□□ -0.1
SHMT2-227ENST00000557269 CCDC85CA6NKD9 419 aa14.43□□□□□ -0.1
SHMT2-227ENST00000557269 WDR64B1ANS9 1081 aa14.43□□□□□ -0.1
SHMT2-227ENST00000557269 SPTLC2O15270 562 aa14.43□□□□□ -0.1
SHMT2-227ENST00000557269 LGR5O75473 907 aa14.43□□□□□ -0.1
SHMT2-227ENST00000557269 YEATS4O95619 227 aa14.43□□□□□ -0.1
SHMT2-227ENST00000557269 ATP4AP20648 1035 aa14.43□□□□□ -0.1
SHMT2-227ENST00000557269 SOX10P56693 466 aa14.43□□□□□ -0.1
SHMT2-227ENST00000557269 PSMC6P62333 389 aa14.43□□□□□ -0.1
SHMT2-227ENST00000557269 MIS18BP1Q6P0N0 1132 aa14.43□□□□□ -0.1
SHMT2-227ENST00000557269 SMAP1Q8IYB5 467 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-227ENST00000557269 IGSF22Q8N9C0 903 aa14.43□□□□□ -0.1
SHMT2-227ENST00000557269 LEO1Q8WVC0 666 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-227ENST00000557269 TSEN34Q9BSV6 310 aaKnown RBP14.43□□□□□ -0.1
SHMT2-227ENST00000557269 WRAP73Q9P2S5 460 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-227ENST00000557269 CFAP45Q9UL16 551 aa14.43□□□□□ -0.1
SHMT2-227ENST00000557269 PHF24Q9UPV7 400 aa14.43□□□□□ -0.1
SHMT2-227ENST00000557269 SAMM50Q9Y512 469 aa14.43□□□□□ -0.1
SHMT2-227ENST00000557269 SRPRBQ9Y5M8 271 aaKnown RBP14.43□□□□□ -0.1
SHMT2-227ENST00000557269 GRIN2DO15399 1336 aa14.42□□□□□ -0.1
SHMT2-227ENST00000557269 PSAPP07602 524 aa14.42□□□□□ -0.1
SHMT2-227ENST00000557269 SFNP31947 248 aa14.42□□□□□ -0.1
SHMT2-227ENST00000557269 JAK3P52333 1124 aa14.42□□□□□ -0.1
SHMT2-227ENST00000557269 KRT85P78386 507 aa14.42□□□□□ -0.1
SHMT2-227ENST00000557269 PDIA5Q14554 519 aa14.42□□□□□ -0.1
SHMT2-227ENST00000557269 EPHA7Q15375 998 aa14.42□□□□□ -0.1
SHMT2-227ENST00000557269 SPECC1Q5M775 1068 aa14.42□□□□□ -0.1
SHMT2-227ENST00000557269 USP49Q70CQ1 688 aa14.42□□□□□ -0.1
SHMT2-227ENST00000557269 PCSK9Q8NBP7 692 aaKnown RBP14.42□□□□□ -0.1
SHMT2-227ENST00000557269 BANK1Q8NDB2 785 aa14.42□□□□□ -0.1
SHMT2-227ENST00000557269 DYDC2Q96IM9 177 aa14.42□□□□□ -0.1
SHMT2-227ENST00000557269 HSD17B14Q9BPX1 270 aa14.42□□□□□ -0.1
SHMT2-227ENST00000557269 EIF2AK1Q9BQI3 630 aaKnown RBP14.42□□□□□ -0.1
SHMT2-227ENST00000557269 MMTAG2Q9BU76 263 aaKnown RBP14.42□□□□□ -0.1
SHMT2-227ENST00000557269 CSRNP2Q9H175 543 aa14.42□□□□□ -0.1
SHMT2-227ENST00000557269 RNPEPQ9H4A4 650 aa14.42□□□□□ -0.1
SHMT2-227ENST00000557269 GABBR1Q9UBS5 961 aa14.42□□□□□ -0.1
SHMT2-227ENST00000557269 LRWD1Q9UFC0 647 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms