RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 CYP2R1Q6VVX0 501 aa6.16□□□□□ -1.42
ATXN3-243ENST00000556671 TMC6Q7Z403 805 aa6.16□□□□□ -1.42
ATXN3-243ENST00000556671 NPM2Q86SE8 214 aaKnown RBP6.16□□□□□ -1.42
ATXN3-243ENST00000556671 IFNL2Q8IZJ0 200 aa6.16□□□□□ -1.42
ATXN3-243ENST00000556671 NAT16Q8N8M0 369 aa6.16□□□□□ -1.42
ATXN3-243ENST00000556671 BRF1Q92994 677 aa6.16□□□□□ -1.42
ATXN3-243ENST00000556671 DACT3Q96B18 629 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-243ENST00000556671 KCNC2Q96PR1 638 aa6.16□□□□□ -1.42
ATXN3-243ENST00000556671 EPB41L4AQ9HCS5 686 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-243ENST00000556671 ZNF451Q9Y4E5 1061 aa6.16□□□□□ -1.42
ATXN3-243ENST00000556671 PCDH11XQ9BZA7 1347 aa6.16□□□□□ -1.42
ATXN3-243ENST00000556671 PCDH11YQ9BZA8 1340 aa6.16□□□□□ -1.42
ATXN3-243ENST00000556671 MEGF6O75095 1541 aa6.15□□□□□ -1.42
ATXN3-243ENST00000556671 NHSQ6T4R5 1651 aa6.15□□□□□ -1.42
ATXN3-243ENST00000556671 NUDT19A8MXV4 375 aa6.15□□□□□ -1.42
ATXN3-243ENST00000556671 NOP2P46087 812 aaKnown RBP6.15□□□□□ -1.42
ATXN3-243ENST00000556671 CTSWP56202 376 aa6.15□□□□□ -1.42
ATXN3-243ENST00000556671 PAK2Q13177 524 aa6.15□□□□□ -1.42
ATXN3-243ENST00000556671 R3HDM1Q15032 1099 aaKnown RBP6.15□□□□□ -1.42
ATXN3-243ENST00000556671 RALBP1Q15311 655 aa6.15□□□□□ -1.42
ATXN3-243ENST00000556671 AMOTQ4VCS5 1084 aa6.15□□□□□ -1.42
ATXN3-243ENST00000556671 METTL16Q86W50 562 aaKnown RBP6.15□□□□□ -1.42
ATXN3-243ENST00000556671 LDHDQ86WU2 507 aa6.15□□□□□ -1.42
ATXN3-243ENST00000556671 IGDCC3Q8IVU1 814 aa6.15□□□□□ -1.42
ATXN3-243ENST00000556671 TMEFF1Q8IYR6 380 aa6.15□□□□□ -1.42
ATXN3-243ENST00000556671 ZNF654Q8IZM8 581 aa6.15□□□□□ -1.42
ATXN3-243ENST00000556671 FIBCD1Q8N539 461 aa6.15□□□□□ -1.42
ATXN3-243ENST00000556671 C20orf173Q96LM9 149 aa6.15□□□□□ -1.42
ATXN3-243ENST00000556671 GINM1Q9NU53 330 aa6.15□□□□□ -1.42
ATXN3-243ENST00000556671 FAM86C1Q9NVL1 165 aa6.15□□□□□ -1.42
ATXN3-243ENST00000556671 PKD1L3Q7Z443 1732 aa6.15□□□□□ -1.42
ATXN3-243ENST00000556671 LTBP3Q9NS15 1303 aa6.15□□□□□ -1.43
ATXN3-243ENST00000556671 TAF1LQ8IZX4 1826 aa6.15□□□□□ -1.43
ATXN3-243ENST00000556671 DISP2A7MBM2 1401 aa6.15□□□□□ -1.43
ATXN3-243ENST00000556671 TNS2Q63HR2 1409 aa6.15□□□□□ -1.43
ATXN3-243ENST00000556671 A0A087WZG4 1122 aa6.14□□□□□ -1.43
ATXN3-243ENST00000556671 CYP27B1O15528 508 aa6.14□□□□□ -1.43
ATXN3-243ENST00000556671 ANP32CO43423 234 aa6.14□□□□□ -1.43
ATXN3-243ENST00000556671 CBFA2T2O43439 604 aa6.14□□□□□ -1.43
ATXN3-243ENST00000556671 TRIM13O60858 407 aa6.14□□□□□ -1.43
ATXN3-243ENST00000556671 MSL3P1P0C860 447 aa6.14□□□□□ -1.43
ATXN3-243ENST00000556671 ITGA4P13612 1032 aa6.14□□□□□ -1.43
ATXN3-243ENST00000556671 SOX9P48436 509 aa6.14□□□□□ -1.43
ATXN3-243ENST00000556671 TXNRD1Q16881 649 aa6.14□□□□□ -1.43
ATXN3-243ENST00000556671 RPTNQ6XPR3 784 aa6.14□□□□□ -1.43
ATXN3-243ENST00000556671 CCDC81Q6ZN84 652 aa6.14□□□□□ -1.43
ATXN3-243ENST00000556671 SPATA32Q96LK8 384 aa6.14□□□□□ -1.43
ATXN3-243ENST00000556671 FCRL3Q96P31 734 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-243ENST00000556671 CAMKK2Q96RR4 588 aa6.14□□□□□ -1.43
ATXN3-243ENST00000556671 ZCCHC4Q9H5U6 513 aa6.14□□□□□ -1.43
ATXN3-243ENST00000556671 NOL6Q9H6R4 1146 aaKnown RBP6.14□□□□□ -1.43
ATXN3-243ENST00000556671 TMOD3Q9NYL9 352 aa6.14□□□□□ -1.43
ATXN3-243ENST00000556671 SF3B6Q9Y3B4 125 aaKnown RBP6.14□□□□□ -1.43
ATXN3-243ENST00000556671 PCDHA5Q9Y5H7 936 aa6.14□□□□□ -1.43
ATXN3-243ENST00000556671 ADAMTS20P59510 1910 aa6.14□□□□□ -1.43
ATXN3-243ENST00000556671 NCANO14594 1321 aa6.14□□□□□ -1.43
ATXN3-243ENST00000556671 NUP188Q5SRE5 1749 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 A0A1W2PQ27 194 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 A0A1W2PQ64 194 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 A0A1W2PQC6 194 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 A0A1W2PQD8 194 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 B8ZZF3 427 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 PRRG2O14669 202 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 PLSCR1O15162 318 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 HSP90AB1P08238 724 aaKnown RBP6.13□□□□□ -1.43
ATXN3-243ENST00000556671 PHKG2P15735 406 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 PRKAR2BP31323 418 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 AFF3P51826 1226 aaKnown RBP6.13□□□□□ -1.43
ATXN3-243ENST00000556671 POU4F1Q01851 419 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 NR1I3Q14994 352 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 WDR43Q15061 677 aaKnown RBP eCLIP6.13□□□□□ -1.43
ATXN3-243ENST00000556671 TCEAL1Q15170 157 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 PLEKHN1Q494U1 663 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-243ENST00000556671 FAM129CQ86XR2 697 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 JAMLQ86YT9 394 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 RASGRP4Q8TDF6 673 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 STK32BQ9NY57 414 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 SLC12A7Q9Y666 1083 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 IGSF1Q8N6C5 1336 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 NPC1L1Q9UHC9 1359 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 LY75O60449 1722 aa6.13□□□□□ -1.43
ATXN3-243ENST00000556671 A0A0G2JLL6 359 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-243ENST00000556671 SRGAP3O43295 1099 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 CD3EP07766 207 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 IFNGR1P15260 489 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 GIPRP48546 466 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 MAPKAPK2P49137 400 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 CORO7P57737 925 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 MTHFSDQ2M296 383 aaKnown RBP6.12□□□□□ -1.43
ATXN3-243ENST00000556671 CNKSR3Q6P9H4 555 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 ZC3H14Q6PJT7 736 aaKnown RBP6.12□□□□□ -1.43
ATXN3-243ENST00000556671 CCDC146Q8IYE0 955 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 C19orf47Q8N9M1 422 aaKnown RBP6.12□□□□□ -1.43
ATXN3-243ENST00000556671 PIGBQ92521 554 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 RTF1Q92541 710 aaKnown RBP6.12□□□□□ -1.43
ATXN3-243ENST00000556671 RREB1Q92766 1687 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 PHACTR3Q96KR7 559 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 EP400Q96L91 3159 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 PTCHD1Q96NR3 888 aa6.12□□□□□ -1.43
ATXN3-243ENST00000556671 CRBNQ96SW2 442 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms