RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 CNOT6LQ96LI5 555 aaKnown RBP9.38□□□□□ -0.91
MARK3-210ENST00000556463 CCDC42Q96M95 316 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 PAPOLBQ9NRJ5 636 aaKnown RBP9.38□□□□□ -0.91
MARK3-210ENST00000556463 SMARCAL1Q9NZC9 954 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 KIF13BQ9NQT8 1826 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 GUCY2FP51841 1108 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 FUKQ8N0W3 1084 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 CYFIP2Q96F07 1278 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 CCDC43Q96MW1 224 aaKnown RBP9.38□□□□□ -0.91
MARK3-210ENST00000556463 UBAC1Q9BSL1 405 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 CCDC113Q9H0I3 377 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 GGT7Q9UJ14 662 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 FAM205AQ6ZU69 1335 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 PHLPP1O60346 1717 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 BICDL2A1A5D9 508 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 SMIM23A6NLE4 172 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 BTNL10A8MVZ5 291 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.38□□□□□ -0.91
MARK3-210ENST00000556463 DNM1LO00429 736 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 MGRN1O60291 552 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 SCG2P13521 617 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 STAT6P42226 847 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 PAK2Q13177 524 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 FAM133BQ5BKY9 247 aaKnown RBP9.38□□□□□ -0.91
MARK3-210ENST00000556463 MEI1Q5TIA1 1274 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 C8orf74Q6P047 294 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 PIK3AP1Q6ZUJ8 805 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 KSR1Q8IVT5 923 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 FAM114A1Q8IWE2 563 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 CSGALNACT2Q8N6G5 542 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 SEC14L1Q92503 715 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 SYN2Q92777 582 aaPredicted RBP9.38□□□□□ -0.91
MARK3-210ENST00000556463 NLRP3Q96P20 1036 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 SEMA6BQ9H3T3 888 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 ZNF804BA4D1E1 1349 aa9.38□□□□□ -0.91
MARK3-210ENST00000556463 GOLGA6L10A0A0M3HER8 536 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 LAD1O00515 517 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 ZNF189O75820 626 aaPredicted RBP9.37□□□□□ -0.91
MARK3-210ENST00000556463 EIF4A3P38919 411 aaKnown RBP9.37□□□□□ -0.91
MARK3-210ENST00000556463 HLTFQ14527 1009 aaKnown RBP eCLIP9.37□□□□□ -0.91
MARK3-210ENST00000556463 UAP1Q16222 522 aaPredicted RBP9.37□□□□□ -0.91
MARK3-210ENST00000556463 HLFQ16534 295 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 CFAP221Q4G0U5 840 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 CC2D2BQ6DHV5 1058 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 CNNM4Q6P4Q7 775 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 TRIM47Q96LD4 638 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 CCDC85AQ96PX6 553 aaPredicted RBP9.37□□□□□ -0.91
MARK3-210ENST00000556463 BRIP1Q9BX63 1249 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 TRIM9Q9C026 710 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 NFU1Q9UMS0 254 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 COL4A1P02462 1669 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 ITGB4P16144 1822 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 hCG_1642624A0A1W2PR95 340 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 GNPATO15228 680 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 MAFGO15525 162 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 ORC4O43929 436 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 TBC1D12O60347 775 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 PDE8AO60658 829 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 STK4Q13043 487 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 SPA17Q15506 151 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 VWA3BQ502W6 1294 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 CATIPQ7Z7H3 387 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 KIAA0895Q8NCT3 520 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 ALS2CR12Q96Q35 445 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 ISCUQ9H1K1 167 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 LRRD1A4D1F6 860 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 NCK2O43639 380 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 MCM7P33993 719 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 PAPOLAP51003 745 aaKnown RBP9.37□□□□□ -0.91
MARK3-210ENST00000556463 EHHADHQ08426 723 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 CCDC96Q2M329 555 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 ANKRD20A8PQ5CZ79 823 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 LONP2Q86WA8 852 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 MTMR14Q8NCE2 650 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 P3H4Q92791 437 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 TMEM60Q9H2L4 133 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 CNNM1Q9NRU3 951 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 MAGEC2Q9UBF1 373 aaPredicted RBP9.37□□□□□ -0.91
MARK3-210ENST00000556463 ZNF232Q9UNY5 417 aa9.37□□□□□ -0.91
MARK3-210ENST00000556463 ATP8B3O60423 1300 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 A0A1B0GVG6 124 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 ZSCAN5CA6NGD5 496 aaPredicted RBP9.36□□□□□ -0.91
MARK3-210ENST00000556463 DNAJC8O75937 253 aaPredicted RBP9.36□□□□□ -0.91
MARK3-210ENST00000556463 GHRP10912 638 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 CTCFP49711 727 aaPredicted RBP9.36□□□□□ -0.91
MARK3-210ENST00000556463 NAB2Q15742 525 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 CFAP58Q5T655 872 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 PDXDC1Q6P996 788 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 CCDC50Q8IVM0 306 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 SCFD2Q8WU76 684 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 SNRNP27Q8WVK2 155 aaKnown RBP9.36□□□□□ -0.91
MARK3-210ENST00000556463 CCT6BQ92526 530 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 TATDN2Q93075 761 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 BICD1Q96G01 975 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 MS4A14Q96JA4 679 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 EVI5O60447 810 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 ATP6V1G1O75348 118 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 ANP32DO95626 131 aa9.36□□□□□ -0.91
MARK3-210ENST00000556463 HOXA7P31268 230 aaPredicted RBP9.36□□□□□ -0.91
MARK3-210ENST00000556463 CXCR5P32302 372 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms