RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SIRT5Q9NXA8 310 aa5.31□□□□□ -1.56
ATXN3-241ENST00000556374 MBD1Q9UIS9 605 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-241ENST00000556374 GGT7Q9UJ14 662 aa5.31□□□□□ -1.56
ATXN3-241ENST00000556374 THRAP3Q9Y2W1 955 aaKnown RBP5.31□□□□□ -1.56
ATXN3-241ENST00000556374 KCTD3Q9Y597 815 aa5.31□□□□□ -1.56
ATXN3-241ENST00000556374 PCDHB12Q9Y5F1 795 aa5.31□□□□□ -1.56
ATXN3-241ENST00000556374 ABCC6O95255 1503 aa5.31□□□□□ -1.56
ATXN3-241ENST00000556374 IBTKQ9P2D0 1353 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-241ENST00000556374 FSD2A1L4K1 749 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 F6X3S4 739 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 VAMP4O75379 141 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 TOMM70O94826 608 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 ZNF205O95201 554 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 PRAMEF1O95521 474 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 MPOP05164 745 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 GSNP06396 782 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 SYPP08247 313 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 HSPA1AP0DMV8 641 aaKnown RBP5.3□□□□□ -1.56
ATXN3-241ENST00000556374 HSPA1BP0DMV9 641 aaKnown RBP5.3□□□□□ -1.56
ATXN3-241ENST00000556374 IL13P35225 146 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 MCM2P49736 904 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 CTSWP56202 376 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 RTP1P59025 263 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 HTRA3P83110 453 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 SRSF3P84103 164 aaKnown RBP5.3□□□□□ -1.56
ATXN3-241ENST00000556374 APOBRQ0VD83 1088 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 CCDC173Q0VFZ6 552 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 CBX2Q14781 532 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-241ENST00000556374 ZNF827Q17R98 1081 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 ADGRF1Q5T601 910 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 TTC22Q5TAA0 569 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 TMC3Q7Z5M5 1100 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 NME9Q86XW9 330 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 RPAP2Q8IXW5 612 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-241ENST00000556374 TNPO1Q92973 898 aaKnown RBP5.3□□□□□ -1.56
ATXN3-241ENST00000556374 NKD1Q969G9 470 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 EAF1Q96JC9 268 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-241ENST00000556374 SRRTQ9BXP5 876 aaKnown RBP5.3□□□□□ -1.56
ATXN3-241ENST00000556374 STK31Q9BXU1 1019 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 PRDM14Q9GZV8 571 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 COPRSQ9NQ92 184 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 ACSL6Q9UKU0 697 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 IRAK3Q9Y616 596 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 LY75O60449 1722 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 PCNTO95613 3336 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 PXDNLA1KZ92 1463 aa5.3□□□□□ -1.56
ATXN3-241ENST00000556374 CPDO75976 1380 aa5.29□□□□□ -1.56
ATXN3-241ENST00000556374 RGPD5Q99666 1765 aa5.29□□□□□ -1.56
ATXN3-241ENST00000556374 ELL2O00472 640 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-241ENST00000556374 IRS4O14654 1257 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-241ENST00000556374 TLR3O15455 904 aaKnown RBP5.29□□□□□ -1.56
ATXN3-241ENST00000556374 USP2O75604 605 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-241ENST00000556374 MSNP26038 577 aaKnown RBP5.29□□□□□ -1.56
ATXN3-241ENST00000556374 CRKP46108 304 aa5.29□□□□□ -1.56
ATXN3-241ENST00000556374 CCT4P50991 539 aaKnown RBP5.29□□□□□ -1.56
ATXN3-241ENST00000556374 ANKRD44Q8N8A2 993 aa5.29□□□□□ -1.56
ATXN3-241ENST00000556374 MARCH10Q8NA82 808 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-241ENST00000556374 RBBP8NLQ8NC74 664 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-241ENST00000556374 SYAP1Q96A49 352 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-241ENST00000556374 KCNC2Q96PR1 638 aa5.29□□□□□ -1.56
ATXN3-241ENST00000556374 THUMPD2Q9BTF0 503 aaKnown RBP5.29□□□□□ -1.56
ATXN3-241ENST00000556374 IRF2BPLQ9H1B7 796 aa5.29□□□□□ -1.56
ATXN3-241ENST00000556374 KCNK12Q9HB15 430 aa5.29□□□□□ -1.56
ATXN3-241ENST00000556374 METTL5Q9NRN9 209 aaKnown RBP5.29□□□□□ -1.56
ATXN3-241ENST00000556374 ADAMTS1Q9UHI8 967 aa5.29□□□□□ -1.56
ATXN3-241ENST00000556374 DDX49Q9Y6V7 483 aaKnown RBP5.29□□□□□ -1.56
ATXN3-241ENST00000556374 USP6P35125 1406 aa5.29□□□□□ -1.56
ATXN3-241ENST00000556374 COL18A1P39060 1754 aa5.29□□□□□ -1.56
ATXN3-241ENST00000556374 TTC21AQ8NDW8 1320 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 USP54Q70EL1 1684 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 ZNF853P0CG23 659 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 XRCC6P12956 609 aaKnown RBP eCLIP5.28□□□□□ -1.56
ATXN3-241ENST00000556374 NCLP19338 710 aaKnown RBP5.28□□□□□ -1.56
ATXN3-241ENST00000556374 HOXA5P20719 270 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 NASPP49321 788 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-241ENST00000556374 EVA1CP58658 441 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 ZC3H6P61129 1189 aaKnown RBP5.28□□□□□ -1.56
ATXN3-241ENST00000556374 TAGLNQ01995 201 aaKnown RBP5.28□□□□□ -1.56
ATXN3-241ENST00000556374 CLCQ05315 142 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 AUHQ13825 339 aaKnown RBP5.28□□□□□ -1.56
ATXN3-241ENST00000556374 NR1I3Q14994 352 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 DDB1Q16531 1140 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 KLHL40Q2TBA0 621 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 SULT6B1Q6IMI4 303 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 SLCO6A1Q86UG4 719 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 DACT3Q96B18 629 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-241ENST00000556374 TM9SF2Q99805 663 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 CHMP4AQ9BY43 222 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 SUCOQ9UBS9 1254 aaKnown RBP5.28□□□□□ -1.56
ATXN3-241ENST00000556374 ZNRF3Q9ULT6 936 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 TAF6LQ9Y6J9 622 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 KAT6BQ8WYB5 2073 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 KIAA1551Q9HCM1 1747 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 RTL1A6NKG5 1358 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 FLT4P35916 1363 aa5.28□□□□□ -1.56
ATXN3-241ENST00000556374 SOS1Q07889 1333 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-241ENST00000556374 PNPLA7Q6ZV29 1317 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 A0A087WZG4 1122 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 ERC2O15083 957 aa5.27□□□□□ -1.57
ATXN3-241ENST00000556374 MBD3O95983 291 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms