RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 FBXL6Q8N531 539 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 VGLL2Q8N8G2 317 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 FBLIM1Q8WUP2 373 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 KAZALD1Q96I82 304 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 SUCLG2Q96I99 432 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 SRCIN1Q9C0H9 1055 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 GNL3LQ9NVN8 582 aaKnown RBP6.01□□□□□ -1.45
ATXN3-239ENST00000556315 CCDC39Q9UFE4 941 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 PRKAG2Q9UGJ0 569 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 PARP2Q9UGN5 583 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 LAMA3Q16787 3333 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 LAMB1P07942 1786 aa6.01□□□□□ -1.45
ATXN3-239ENST00000556315 IL16Q14005 1332 aa6□□□□□ -1.45
ATXN3-239ENST00000556315 METTL12A8MUP2 240 aa6□□□□□ -1.45
ATXN3-239ENST00000556315 USP11P51784 963 aa6□□□□□ -1.45
ATXN3-239ENST00000556315 DAB2P98082 770 aa6□□□□□ -1.45
ATXN3-239ENST00000556315 TAGLNQ01995 201 aaKnown RBP6□□□□□ -1.45
ATXN3-239ENST00000556315 GSTM4Q03013 218 aa6□□□□□ -1.45
ATXN3-239ENST00000556315 CACNB2Q08289 660 aaPredicted RBP6□□□□□ -1.45
ATXN3-239ENST00000556315 SPP2Q13103 211 aa6□□□□□ -1.45
ATXN3-239ENST00000556315 PUM3Q15397 648 aaKnown RBP6□□□□□ -1.45
ATXN3-239ENST00000556315 NFKBIBQ15653 356 aa6□□□□□ -1.45
ATXN3-239ENST00000556315 RABL6Q3YEC7 729 aaPredicted RBP6□□□□□ -1.45
ATXN3-239ENST00000556315 GPRC5AQ8NFJ5 357 aa6□□□□□ -1.45
ATXN3-239ENST00000556315 TRIB2Q92519 343 aa6□□□□□ -1.45
ATXN3-239ENST00000556315 LPIN2Q92539 896 aa6□□□□□ -1.45
ATXN3-239ENST00000556315 GATA6Q92908 595 aa6□□□□□ -1.45
ATXN3-239ENST00000556315 SENP6Q9GZR1 1112 aaPredicted RBP6□□□□□ -1.45
ATXN3-239ENST00000556315 ASCC2Q9H1I8 757 aaPredicted RBP6□□□□□ -1.45
ATXN3-239ENST00000556315 LIN7BQ9HAP6 207 aa6□□□□□ -1.45
ATXN3-239ENST00000556315 MRS2Q9HD23 443 aa6□□□□□ -1.45
ATXN3-239ENST00000556315 MORF4L1Q9UBU8 362 aa6□□□□□ -1.45
ATXN3-239ENST00000556315 ARID1BQ8NFD5 2236 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-239ENST00000556315 ATRNL1Q5VV63 1379 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 DDTLA6NHG4 134 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-239ENST00000556315 SORBS3O60504 671 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 NBPF7P0C2Y1 421 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-239ENST00000556315 SLC5A1P13866 664 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 ZKSCAN1P17029 563 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-239ENST00000556315 EIF4BP23588 611 aaKnown RBP5.99□□□□□ -1.45
ATXN3-239ENST00000556315 PRDX5P30044 214 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 MAPK4P31152 587 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 HOXA7P31268 230 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-239ENST00000556315 ADMP35318 185 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 RGS2P41220 211 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 SMAD3P84022 425 aaKnown RBP5.99□□□□□ -1.45
ATXN3-239ENST00000556315 DDX10Q13206 875 aaKnown RBP5.99□□□□□ -1.45
ATXN3-239ENST00000556315 GRM2Q14416 872 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 PDE3AQ14432 1141 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 SHHQ15465 462 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 ZNF423Q2M1K9 1284 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 SLC4A10Q6U841 1118 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 PI16Q6UXB8 463 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 CBLL1Q75N03 491 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 ZAR1Q86SH2 424 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 CCNJLQ8IV13 435 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 CCAR1Q8IX12 1150 aaKnown RBP5.99□□□□□ -1.45
ATXN3-239ENST00000556315 ZGPATQ8N5A5 531 aaKnown RBP5.99□□□□□ -1.45
ATXN3-239ENST00000556315 SOCS4Q8WXH5 440 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 MYLIPQ8WY64 445 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 USP6NLQ92738 828 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 P2RX7Q99572 595 aaKnown RBP5.99□□□□□ -1.45
ATXN3-239ENST00000556315 BCO2Q9BYV7 579 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 OSBPL5Q9H0X9 879 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-239ENST00000556315 C12orf49Q9H741 205 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 ZFYVE1Q9HBF4 777 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 DENND2AQ9ULE3 1009 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 AK5Q9Y6K8 562 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 UTYO14607 1347 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 SALL1Q9NSC2 1324 aa5.99□□□□□ -1.45
ATXN3-239ENST00000556315 TMEM265A0A087WTH1 108 aa5.98□□□□□ -1.45
ATXN3-239ENST00000556315 A0A096LPE4 126 aa5.98□□□□□ -1.45
ATXN3-239ENST00000556315 A0A1W2PPZ6 126 aa5.98□□□□□ -1.45
ATXN3-239ENST00000556315 EYA2O00167 538 aa5.98□□□□□ -1.45
ATXN3-239ENST00000556315 MSCO60682 206 aa5.98□□□□□ -1.45
ATXN3-239ENST00000556315 ADH5P11766 374 aa5.98□□□□□ -1.45
ATXN3-239ENST00000556315 FOSL2P15408 326 aa5.98□□□□□ -1.45
ATXN3-239ENST00000556315 CCND3P30281 292 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-239ENST00000556315 HMGCS2P54868 508 aa5.98□□□□□ -1.45
ATXN3-239ENST00000556315 IRX3P78415 501 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-239ENST00000556315 EXOSC9Q06265 439 aaKnown RBP5.98□□□□□ -1.45
ATXN3-239ENST00000556315 PCDH1Q08174 1060 aa5.98□□□□□ -1.45
ATXN3-239ENST00000556315 MFSD14CQ5VZR4 134 aa5.98□□□□□ -1.45
ATXN3-239ENST00000556315 CCDC84Q86UT8 332 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-239ENST00000556315 VSIG10LQ86VR7 867 aa5.98□□□□□ -1.45
ATXN3-239ENST00000556315 ANKRD44Q8N8A2 993 aa5.98□□□□□ -1.45
ATXN3-239ENST00000556315 FAM122AQ96E09 287 aa5.98□□□□□ -1.45
ATXN3-239ENST00000556315 EDC3Q96F86 508 aaKnown RBP5.98□□□□□ -1.45
ATXN3-239ENST00000556315 TCF12Q99081 682 aa5.98□□□□□ -1.45
ATXN3-239ENST00000556315 YIPF2Q9BWQ6 316 aa5.98□□□□□ -1.45
ATXN3-239ENST00000556315 CLEC4MQ9H2X3 399 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-239ENST00000556315 TTYH1Q9H313 450 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-239ENST00000556315 BICC1Q9H694 974 aaKnown RBP5.98□□□□□ -1.45
ATXN3-239ENST00000556315 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.98□□□□□ -1.45
ATXN3-239ENST00000556315 AS3MTQ9HBK9 375 aa5.98□□□□□ -1.45
ATXN3-239ENST00000556315 FAM8A1Q9UBU6 413 aa5.98□□□□□ -1.45
ATXN3-239ENST00000556315 GAKO14976 1311 aa5.98□□□□□ -1.45
ATXN3-239ENST00000556315 ZSWIM8A7E2V4 1837 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 C19orf81C9J6K1 198 aa5.97□□□□□ -1.45
ATXN3-239ENST00000556315 DNM1LO00429 736 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms