RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 YEATS4O95619 227 aa12.63□□□□□ -0.39
CHGA-205ENST00000556098 TOP1P11387 765 aaKnown RBP12.63□□□□□ -0.39
CHGA-205ENST00000556098 PTCRAQ6ISU1 281 aaPredicted RBP12.63□□□□□ -0.39
CHGA-205ENST00000556098 GDF6Q6KF10 455 aaPredicted RBP12.63□□□□□ -0.39
CHGA-205ENST00000556098 SEPT14Q6ZU15 432 aa12.63□□□□□ -0.39
CHGA-205ENST00000556098 TMTC3Q6ZXV5 915 aa12.63□□□□□ -0.39
CHGA-205ENST00000556098 GJD3Q8N144 294 aa12.63□□□□□ -0.39
CHGA-205ENST00000556098 PNMA1Q8ND90 353 aa12.63□□□□□ -0.39
CHGA-205ENST00000556098 SCFD2Q8WU76 684 aa12.63□□□□□ -0.39
CHGA-205ENST00000556098 DCAF4Q8WV16 495 aa12.63□□□□□ -0.39
CHGA-205ENST00000556098 SPATA32Q96LK8 384 aa12.63□□□□□ -0.39
CHGA-205ENST00000556098 ZKSCAN3Q9BRR0 538 aa12.63□□□□□ -0.39
CHGA-205ENST00000556098 RANBP17Q9H2T7 1088 aaKnown RBP12.63□□□□□ -0.39
CHGA-205ENST00000556098 SUGCTQ9HAC7 445 aa12.63□□□□□ -0.39
CHGA-205ENST00000556098 BRMS1Q9HCU9 246 aa12.63□□□□□ -0.39
CHGA-205ENST00000556098 MORC2Q9Y6X9 1032 aaPredicted RBP12.63□□□□□ -0.39
CHGA-205ENST00000556098 GOLGA6L4A6NEF3 574 aa12.62□□□□□ -0.39
CHGA-205ENST00000556098 hCG_1984214I3L0E3 225 aa12.62□□□□□ -0.39
CHGA-205ENST00000556098 NKRFO15226 690 aaKnown RBP eCLIP12.62□□□□□ -0.39
CHGA-205ENST00000556098 FIBPO43427 364 aa12.62□□□□□ -0.39
CHGA-205ENST00000556098 KPNA6O60684 536 aa12.62□□□□□ -0.39
CHGA-205ENST00000556098 U2AF2P26368 475 aaKnown RBP eCLIP12.62□□□□□ -0.39
CHGA-205ENST00000556098 ZNF445P59923 1031 aa12.62□□□□□ -0.39
CHGA-205ENST00000556098 GRM4Q14833 912 aa12.62□□□□□ -0.39
CHGA-205ENST00000556098 CNKSR3Q6P9H4 555 aa12.62□□□□□ -0.39
CHGA-205ENST00000556098 ZNF713Q8N859 430 aaPredicted RBP12.62□□□□□ -0.39
CHGA-205ENST00000556098 FBXO22Q8NEZ5 403 aa12.62□□□□□ -0.39
CHGA-205ENST00000556098 KCNG4Q8TDN1 519 aa12.62□□□□□ -0.39
CHGA-205ENST00000556098 MORC4Q8TE76 937 aa12.62□□□□□ -0.39
CHGA-205ENST00000556098 AFAP1L1Q8TED9 768 aa12.62□□□□□ -0.39
CHGA-205ENST00000556098 AFG1LQ8WV93 481 aa12.62□□□□□ -0.39
CHGA-205ENST00000556098 TGS1Q96RS0 853 aaKnown RBP12.62□□□□□ -0.39
CHGA-205ENST00000556098 C17orf80Q9BSJ5 609 aa12.62□□□□□ -0.39
CHGA-205ENST00000556098 SLC26A6Q9BXS9 759 aa12.62□□□□□ -0.39
CHGA-205ENST00000556098 FOXP1Q9H334 677 aaPredicted RBP12.62□□□□□ -0.39
CHGA-205ENST00000556098 SENP2Q9HC62 589 aa12.62□□□□□ -0.39
CHGA-205ENST00000556098 SH3GLB2Q9NR46 395 aa12.62□□□□□ -0.39
CHGA-205ENST00000556098 IL17RBQ9NRM6 502 aa12.62□□□□□ -0.39
CHGA-205ENST00000556098 LINC01553A4QN01 128 aa12.61□□□□□ -0.39
CHGA-205ENST00000556098 H3BQ06 376 aaPredicted RBP12.61□□□□□ -0.39
CHGA-205ENST00000556098 ARIH2O95376 493 aa12.61□□□□□ -0.39
CHGA-205ENST00000556098 SELPP16109 830 aa12.61□□□□□ -0.39
CHGA-205ENST00000556098 MRE11P49959 708 aa12.61□□□□□ -0.39
CHGA-205ENST00000556098 RPS6P62753 249 aaKnown RBP12.61□□□□□ -0.39
CHGA-205ENST00000556098 PTPN11Q06124 597 aaPredicted RBP12.61□□□□□ -0.39
CHGA-205ENST00000556098 GNL2Q13823 731 aaKnown RBP12.61□□□□□ -0.39
CHGA-205ENST00000556098 LY6KQ17RY6 165 aa12.61□□□□□ -0.39
CHGA-205ENST00000556098 TCTN1Q2MV58 587 aa12.61□□□□□ -0.39
CHGA-205ENST00000556098 GALNT17Q6IS24 598 aa12.61□□□□□ -0.39
CHGA-205ENST00000556098 FERMT3Q86UX7 667 aa12.61□□□□□ -0.39
CHGA-205ENST00000556098 MYOCDQ8IZQ8 938 aa12.61□□□□□ -0.39
CHGA-205ENST00000556098 C7orf31Q8N865 590 aa12.61□□□□□ -0.39
CHGA-205ENST00000556098 CAGE1Q8TC20 777 aa12.61□□□□□ -0.39
CHGA-205ENST00000556098 LEO1Q8WVC0 666 aaPredicted RBP12.61□□□□□ -0.39
CHGA-205ENST00000556098 ARIH1Q9Y4X5 557 aaPredicted RBP12.61□□□□□ -0.39
CHGA-205ENST00000556098 CNTNAP5Q8WYK1 1306 aa12.61□□□□□ -0.39
CHGA-205ENST00000556098 RBM47A0AV96 593 aaKnown RBP12.6□□□□□ -0.39
CHGA-205ENST00000556098 PRR33A8MZF0 331 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 B4DLN1 442 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 PLA2G6O60733 806 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 BMP15O95972 392 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 MMP1P03956 469 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 MMP3P08254 477 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 ZNF286BP0CG31 522 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 MRPL12P52815 198 aaKnown RBP12.6□□□□□ -0.39
CHGA-205ENST00000556098 FUT2Q10981 343 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 IKBKEQ14164 716 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 ASPRV1Q53RT3 343 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 CCDC183Q5T5S1 534 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 MYSM1Q5VVJ2 828 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 FAM178BQ8IXR5 827 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 DHX37Q8IY37 1157 aaKnown RBP12.6□□□□□ -0.39
CHGA-205ENST00000556098 CCDC148Q8NFR7 591 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.6□□□□□ -0.39
CHGA-205ENST00000556098 GPT2Q8TD30 523 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 CCDC12Q8WUD4 166 aaPredicted RBP12.6□□□□□ -0.39
CHGA-205ENST00000556098 RAD9AQ99638 391 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 MYL10Q9BUA6 226 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 SPZ1Q9BXG8 430 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 RTEL1Q9NZ71 1219 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 RCOR1Q9UKL0 485 aa12.6□□□□□ -0.39
CHGA-205ENST00000556098 GOLGA6L3A6NEY3 463 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 A6NJR5 290 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 NBNO60934 754 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 UPP2O95045 317 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 GJB5O95377 273 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 GH1P01241 217 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 GOLGA8HP0CJ92 632 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 CKBP12277 381 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 ALADP13716 330 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 RXRAP19793 462 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 NASPP49321 788 aaPredicted RBP12.59□□□□□ -0.39
CHGA-205ENST00000556098 ERVK-21P61565 698 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 CLUL1Q15846 466 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 LEXMQ3ZCV2 418 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 RILPL1Q5EBL4 403 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.59□□□□□ -0.39
CHGA-205ENST00000556098 CLEC4DQ8WXI8 215 aa12.59□□□□□ -0.39
CHGA-205ENST00000556098 DHX38Q92620 1227 aaKnown RBP12.59□□□□□ -0.39
CHGA-205ENST00000556098 PHKBQ93100 1093 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms