RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 THOC5Q13769 683 aaKnown RBP11.58□□□□□ -0.56
ACTN1-216ENST00000556083 LRRC24Q50LG9 513 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 ATG16L1Q676U5 607 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 EMBQ6PCB8 327 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 PDIK1LQ8N165 341 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 TBCKQ8TEA7 893 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 FBXO41Q8TF61 875 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 RUBCNQ92622 972 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 GJA10Q969M2 543 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 IQANK1A0A1B0GTG1 560 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 MSH2P43246 934 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 YWHAGP61981 247 aaKnown RBP eCLIP11.58□□□□□ -0.56
ACTN1-216ENST00000556083 IFRD2Q12894 506 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-216ENST00000556083 LRMPQ12912 555 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 TEX2Q8IWB9 1127 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 CCDC197Q8NCU1 140 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 HDAC11Q96DB2 347 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 INTS9Q9NV88 658 aaKnown RBP11.58□□□□□ -0.56
ACTN1-216ENST00000556083 ANO9A1A5B4 782 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 CALB1P05937 261 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 ADKP55263 362 aaKnown RBP11.58□□□□□ -0.56
ACTN1-216ENST00000556083 RNASE9P60153 205 aaKnown RBP11.58□□□□□ -0.56
ACTN1-216ENST00000556083 MMEL1Q495T6 779 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 SEPT14Q6ZU15 432 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 SCG3Q8WXD2 468 aaKnown RBP11.58□□□□□ -0.56
ACTN1-216ENST00000556083 ZNF341Q9BYN7 854 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 TRIM15Q9C019 465 aa11.58□□□□□ -0.56
ACTN1-216ENST00000556083 ACTR5Q9H9F9 607 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-216ENST00000556083 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.58□□□□□ -0.56
ACTN1-216ENST00000556083 CYP21A2P08686 494 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 PAPOLAP51003 745 aaKnown RBP11.57□□□□□ -0.56
ACTN1-216ENST00000556083 NDUFA8P51970 172 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 CLNS1AP54105 237 aaKnown RBP11.57□□□□□ -0.56
ACTN1-216ENST00000556083 TAP1Q03518 808 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 MUM1Q2TAK8 710 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 SGO2Q562F6 1265 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 ALDH8A1Q9H2A2 487 aaPredicted RBP11.57□□□□□ -0.56
ACTN1-216ENST00000556083 GINM1Q9NU53 330 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 TXLNGQ9NUQ3 528 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 PHKA2P46019 1235 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 GNGT1P63211 74 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 ADCY2Q08462 1091 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 TOGARAM2Q6ZUX3 1019 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 UNC13DQ70J99 1090 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.57□□□□□ -0.56
ACTN1-216ENST00000556083 ZBTB1Q9Y2K1 713 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 SYNGAP1Q96PV0 1343 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 ARHGAP42A6NI28 874 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 K7ERI5 159 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 GADD45BO75293 160 aaPredicted RBP11.57□□□□□ -0.56
ACTN1-216ENST00000556083 MYBL1P10243 752 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 C6orf118Q5T5N4 469 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 TMTC3Q6ZXV5 915 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 TMEM35BQ8NCS4 154 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 GIPC2Q8TF65 315 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 PPP1R2P1Q96PQ5 205 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 TRIM45Q9H8W5 580 aaPredicted RBP11.57□□□□□ -0.56
ACTN1-216ENST00000556083 ANKFY1Q9P2R3 1169 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 ATP5HO75947 161 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 PYGBP11216 843 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 TAC1P20366 129 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 TRIM28Q13263 835 aaKnown RBP11.57□□□□□ -0.56
ACTN1-216ENST00000556083 TEDDM1Q5T9Z0 273 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 NARFQ9UHQ1 456 aa11.57□□□□□ -0.56
ACTN1-216ENST00000556083 HERC5Q9UII4 1024 aaKnown RBP11.57□□□□□ -0.56
ACTN1-216ENST00000556083 STXBP2Q15833 593 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 BSPRYQ5W0U4 402 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 CENPUQ71F23 418 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 RNF169Q8NCN4 708 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 PSPC1Q8WXF1 523 aaKnown RBP11.56□□□□□ -0.56
ACTN1-216ENST00000556083 FAM149B1Q96BN6 582 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 GCOM2Q9BZD3 368 aaPredicted RBP11.56□□□□□ -0.56
ACTN1-216ENST00000556083 MAD1L1Q9Y6D9 718 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 PFASO15067 1338 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 HECW2Q9P2P5 1572 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 KRT37O76014 449 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 TJP3O95049 919 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 PLA2G4BP0C869 781 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 SCNN1DP51172 638 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 RWDD2BP57060 319 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 PSMD6Q15008 389 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 PDCD2Q16342 344 aaPredicted RBP11.56□□□□□ -0.56
ACTN1-216ENST00000556083 TKFCQ3LXA3 575 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 PDXDC2PQ6P474 469 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 ANKRD42Q8N9B4 389 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 ACAP3Q96P50 834 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 ANO3Q9BYT9 981 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 CYP26B1Q9NR63 512 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 CDC42BPGQ6DT37 1551 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 TMEM247A6NEH6 219 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 ESRRGP62508 458 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 DOK7Q18PE1 504 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 ZNF667Q5HYK9 610 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 BPIFA3Q9BQP9 254 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 EFCC1Q9HA90 598 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 SGK1O00141 431 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 USP17L8P0C7I0 530 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 STILQ15468 1287 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 ZSCAN26Q16670 478 aa11.56□□□□□ -0.56
ACTN1-216ENST00000556083 C2orf69Q8N8R5 385 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms