RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 NR1I2O75469 434 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 UBA1P22314 1058 aaKnown RBP12.39□□□□□ -0.43
TMEM260-208ENST00000555905 CYP2C19P33261 490 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 CCT6AP40227 531 aaKnown RBP12.39□□□□□ -0.43
TMEM260-208ENST00000555905 JAK3P52333 1124 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 PRMT2P55345 433 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 SP2Q02086 613 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 ZRSR1Q15695 479 aaKnown RBP12.39□□□□□ -0.43
TMEM260-208ENST00000555905 LY6KQ17RY6 165 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 ZNF746Q6NUN9 644 aaPredicted RBP12.39□□□□□ -0.43
TMEM260-208ENST00000555905 TAPT1Q6NXT6 567 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 MIER3Q7Z3K6 550 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 SMAP1Q8IYB5 467 aaPredicted RBP12.39□□□□□ -0.43
TMEM260-208ENST00000555905 FMR1NBQ8N0W7 255 aaPredicted RBP12.39□□□□□ -0.43
TMEM260-208ENST00000555905 RDM1Q8NG50 284 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 RAET1EQ8TD07 263 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 SYAP1Q96A49 352 aaPredicted RBP12.39□□□□□ -0.43
TMEM260-208ENST00000555905 PANK2Q9BZ23 570 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 KATNBL1Q9H079 304 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 MLXIPQ9HAP2 919 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 PDGFCQ9NRA1 345 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 DDX19AQ9NUU7 478 aaKnown RBP12.39□□□□□ -0.43
TMEM260-208ENST00000555905 DACT1Q9NYF0 836 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 USP25Q9UHP3 1055 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 NRBP1Q9UHY1 535 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 DDX41Q9UJV9 622 aaKnown RBP12.39□□□□□ -0.43
TMEM260-208ENST00000555905 SAMM50Q9Y512 469 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 DOCK5Q9H7D0 1870 aa12.39□□□□□ -0.43
TMEM260-208ENST00000555905 WDR64B1ANS9 1081 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 POLR2DO15514 142 aaKnown RBP12.38□□□□□ -0.43
TMEM260-208ENST00000555905 ZNF202O95125 648 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 GGPS1O95749 300 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 STAT6P42226 847 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 CAP1Q01518 475 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 SNW1Q13573 536 aaKnown RBP12.38□□□□□ -0.43
TMEM260-208ENST00000555905 KARSQ15046 597 aaKnown RBP12.38□□□□□ -0.43
TMEM260-208ENST00000555905 EPHA7Q15375 998 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 CELF3Q5SZQ8 465 aaKnown RBP12.38□□□□□ -0.43
TMEM260-208ENST00000555905 RRAGBQ5VZM2 374 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 IQSEC1Q6DN90 963 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 CCDC62Q6P9F0 684 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 METTL7BQ6UX53 244 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 B3GNT9Q6UX72 402 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 CYFIP1Q7L576 1253 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 DHX37Q8IY37 1157 aaKnown RBP12.38□□□□□ -0.43
TMEM260-208ENST00000555905 PDILTQ8N807 584 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 IQUBQ8NA54 791 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 ENGASEQ8NFI3 743 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 NEK9Q8TD19 979 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 CCDC34Q96HJ3 373 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 EIF2AK1Q9BQI3 630 aaKnown RBP12.38□□□□□ -0.43
TMEM260-208ENST00000555905 MMTAG2Q9BU76 263 aaKnown RBP12.38□□□□□ -0.43
TMEM260-208ENST00000555905 POLR3CQ9BUI4 534 aaPredicted RBP12.38□□□□□ -0.43
TMEM260-208ENST00000555905 NT5C3AQ9H0P0 336 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 DISC1Q9NRI5 854 aa12.38□□□□□ -0.43
TMEM260-208ENST00000555905 EML1O00423 815 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 NKRFO15226 690 aaKnown RBP eCLIP12.37□□□□□ -0.43
TMEM260-208ENST00000555905 ADCY3O60266 1144 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 SORBS3O60504 671 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 ARIH2O95376 493 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 CCNE2O96020 404 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 GH1P01241 217 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 IGHA2P01877 340 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 PSAPP07602 524 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 RPA1P27694 616 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 ADCYAP1R1P41586 468 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 ACTR2P61160 394 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 SP4Q02446 784 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 TNFAIP2Q03169 654 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 LAMC2Q13753 1193 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 CCDC144BQ3MJ40 725 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 MIS18BP1Q6P0N0 1132 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 CEP57L1Q8IYX8 460 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 TRIB2Q92519 343 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 DHX58Q96C10 678 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 TIGD1Q96MW7 591 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 TUFT1Q9NNX1 390 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 HOOK1Q9UJC3 728 aaKnown RBP12.37□□□□□ -0.43
TMEM260-208ENST00000555905 PCDHA10Q9Y5I2 948 aa12.37□□□□□ -0.43
TMEM260-208ENST00000555905 PCNTO95613 3336 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 A0A087X0B3 334 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 NOP56O00567 594 aaKnown RBP12.36□□□□□ -0.43
TMEM260-208ENST00000555905 MED24O75448 989 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 FARP2O94887 1054 aaPredicted RBP12.36□□□□□ -0.43
TMEM260-208ENST00000555905 P4HBP07237 508 aaKnown RBP12.36□□□□□ -0.43
TMEM260-208ENST00000555905 ZNF865P0CJ78 1059 aaPredicted RBP12.36□□□□□ -0.43
TMEM260-208ENST00000555905 PLCG1P19174 1290 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 MUTP22033 750 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 DUSP28Q4G0W2 176 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 PRAMEF19Q5SWL8 479 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 HYIQ5T013 277 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 CCDC183Q5T5S1 534 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 KANK3Q6NY19 840 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 CAVIN1Q6NZI2 390 aaKnown RBP12.36□□□□□ -0.43
TMEM260-208ENST00000555905 CATSPER3Q86XQ3 398 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 TPH2Q8IWU9 490 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 KCTD17Q8N5Z5 321 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 CNNM3Q8NE01 707 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 PXYLP1Q8TE99 480 aa12.36□□□□□ -0.43
TMEM260-208ENST00000555905 KIF12Q96FN5 646 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms