RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 GPRASP2Q96D09 838 aa8.8□□□□□ -1
PCNX4-210ENST00000555740 INPP4AQ96PE3 977 aaPredicted RBP8.8□□□□□ -1
PCNX4-210ENST00000555740 RMDN3Q96TC7 470 aa8.8□□□□□ -1
PCNX4-210ENST00000555740 MXRA8Q9BRK3 442 aa8.8□□□□□ -1
PCNX4-210ENST00000555740 PORCNQ9H237 461 aa8.8□□□□□ -1
PCNX4-210ENST00000555740 JADE2Q9NQC1 790 aa8.8□□□□□ -1
PCNX4-210ENST00000555740 DIS3Q9Y2L1 958 aaKnown RBP8.8□□□□□ -1
PCNX4-210ENST00000555740 MCM3APO60318 1980 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 SLC15A5A6NIM6 579 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 ATG7O95352 703 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 FAM160A1Q05DH4 1040 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 KCNA1Q09470 495 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 KCNH2Q12809 1159 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 MORN1Q5T089 497 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 B3GNT9Q6UX72 402 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 NCAPG2Q86XI2 1143 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 ANKRD13CQ8N6S4 541 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 GOLPH3LQ9H4A5 285 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 DDX19AQ9NUU7 478 aaKnown RBP8.79□□□□□ -1
PCNX4-210ENST00000555740 ADD3Q9UEY8 706 aaKnown RBP8.79□□□□□ -1
PCNX4-210ENST00000555740 VAV3Q9UKW4 847 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 SOWAHBA6NEL2 793 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 ATP9BO43861 1147 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 PEX10O60683 326 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 LGR5O75473 907 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 IGHA2P01877 340 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 FCER1AP12319 257 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 MARCKSP29966 332 aaPredicted RBP8.79□□□□□ -1
PCNX4-210ENST00000555740 ICAM3P32942 547 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 MRPS9P82933 396 aaKnown RBP8.79□□□□□ -1
PCNX4-210ENST00000555740 SPIRE1Q08AE8 756 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 CRHR2Q13324 411 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 KCTD2Q14681 263 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 ZNF792Q3KQV3 632 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 ARHGEF16Q5VV41 709 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 FMR1NBQ8N0W7 255 aaPredicted RBP8.79□□□□□ -1
PCNX4-210ENST00000555740 ANKRD35Q8N283 1001 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 MSL3Q8N5Y2 521 aaKnown RBP8.79□□□□□ -1
PCNX4-210ENST00000555740 USP6NLQ92738 828 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 TIGD1Q96MW7 591 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 PYM1Q9BRP8 204 aaKnown RBP8.79□□□□□ -1
PCNX4-210ENST00000555740 CCSER1Q9C0I3 900 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 USP25Q9UHP3 1055 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 MRVI1Q9Y6F6 885 aa8.79□□□□□ -1
PCNX4-210ENST00000555740 DOCK5Q9H7D0 1870 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 B4DLN1 442 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 HOXC6P09630 235 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 ITGB5P18084 799 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 ATP2B1P20020 1258 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 GRIN1Q05586 938 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 PPP2R5CQ13362 524 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 SNW1Q13573 536 aaKnown RBP8.78□□□□□ -1
PCNX4-210ENST00000555740 PDIA5Q14554 519 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 HYIQ5T013 277 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 DTHD1Q6ZMT9 781 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 GPR142Q7Z601 462 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 PLEKHH3Q7Z736 793 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 CCAR1Q8IX12 1150 aaKnown RBP8.78□□□□□ -1
PCNX4-210ENST00000555740 FSIP1Q8NA03 581 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 MARVELD3Q96A59 401 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 ZIC5Q96T25 663 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 MPHOSPH6Q99547 160 aaKnown RBP8.78□□□□□ -1
PCNX4-210ENST00000555740 RIT2Q99578 217 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 CSRNP2Q9H175 543 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 R3HDMLQ9H3Y0 253 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 SAGE1Q9NXZ1 904 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 NFASCO94856 1347 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 MSH4O15457 936 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 MAFGO15525 162 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 NR3C2P08235 984 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 PFKFB1P16118 471 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 LIG1P18858 919 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 EIF2AK2P19525 551 aaKnown RBP8.78□□□□□ -1
PCNX4-210ENST00000555740 TMEM266Q2M3C6 531 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 MAMDC4Q6UXC1 1216 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 CCDC73Q6ZRK6 1079 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 RBM43Q6ZSC3 357 aaKnown RBP8.78□□□□□ -1
PCNX4-210ENST00000555740 SND1Q7KZF4 910 aaKnown RBP eCLIP8.78□□□□□ -1
PCNX4-210ENST00000555740 CDHR1Q96JP9 859 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 EFCC1Q9HA90 598 aa8.78□□□□□ -1
PCNX4-210ENST00000555740 AGO4Q9HCK5 861 aaKnown RBP8.78□□□□□ -1
PCNX4-210ENST00000555740 GOLGA6L4A6NEF3 574 aa8.77□□□□□ -1.01
PCNX4-210ENST00000555740 PSMD10O75832 226 aa8.77□□□□□ -1.01
PCNX4-210ENST00000555740 RETREG3Q86VR2 466 aa8.77□□□□□ -1.01
PCNX4-210ENST00000555740 PLA2G4DQ86XP0 818 aa8.77□□□□□ -1.01
PCNX4-210ENST00000555740 SOCS4Q8WXH5 440 aa8.77□□□□□ -1.01
PCNX4-210ENST00000555740 CLIC6Q96NY7 704 aa8.77□□□□□ -1.01
PCNX4-210ENST00000555740 RAB34Q9BZG1 259 aa8.77□□□□□ -1.01
PCNX4-210ENST00000555740 CLSTN2Q9H4D0 955 aa8.77□□□□□ -1.01
PCNX4-210ENST00000555740 MAGEF1Q9HAY2 307 aa8.77□□□□□ -1.01
PCNX4-210ENST00000555740 FAM13BQ9NYF5 915 aa8.77□□□□□ -1.01
PCNX4-210ENST00000555740 DDX49Q9Y6V7 483 aaKnown RBP8.77□□□□□ -1.01
PCNX4-210ENST00000555740 SYNGAP1Q96PV0 1343 aa8.77□□□□□ -1.01
PCNX4-210ENST00000555740 VWA3AA6NCI4 1184 aa8.77□□□□□ -1.01
PCNX4-210ENST00000555740 ASB14A6NK59 587 aa8.77□□□□□ -1.01
PCNX4-210ENST00000555740 AOC2O75106 756 aa8.77□□□□□ -1.01
PCNX4-210ENST00000555740 EIF3JO75822 258 aaKnown RBP8.77□□□□□ -1.01
PCNX4-210ENST00000555740 MUTP22033 750 aa8.77□□□□□ -1.01
PCNX4-210ENST00000555740 CNTN2Q02246 1040 aa8.77□□□□□ -1.01
PCNX4-210ENST00000555740 TMEM119Q4V9L6 283 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms