RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 USP17L22D6RA61 530 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 USP17L17D6RBQ6 530 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 USP17L19D6RCP7 530 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 USP17L20D6RJB6 530 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 CDK17Q00537 523 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 USP17L24Q0WX57 530 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 USP17L6PQ6QN14 398 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 KCTD1Q719H9 257 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 CPLX4Q7Z7G2 160 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 MYCBPQ99417 103 aaPredicted RBP19.46■□□□□ 0.71
RCCD1-204ENST00000555737 TRIM51Q9BSJ1 452 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 GGT7Q9UJ14 662 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 TIAM2Q8IVF5 1701 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 NUP98P52948 1817 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 TTI1O43156 1089 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 SART1O43290 800 aaKnown RBP19.46■□□□□ 0.71
RCCD1-204ENST00000555737 CYP4A11Q02928 519 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 KCNH2Q12809 1159 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 NBPF9Q3BBW0 867 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 DAAM2Q86T65 1068 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 SELENOSQ9BQE4 189 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 RAB34Q9BZG1 259 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 PCDHA12Q9UN75 941 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 PCDHB13Q9Y5F0 798 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 MYH3P11055 1940 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 TAL1P17542 331 aaPredicted RBP19.46■□□□□ 0.71
RCCD1-204ENST00000555737 NR2F2P24468 414 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 MAGOHP61326 146 aaKnown RBP19.46■□□□□ 0.71
RCCD1-204ENST00000555737 ZNF211Q13398 564 aaPredicted RBP19.46■□□□□ 0.71
RCCD1-204ENST00000555737 NAB2Q15742 525 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 PTF1AQ7RTS3 328 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 CCDC91Q7Z6B0 441 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 KSR1Q8IVT5 923 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 USP38Q8NB14 1042 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 MAGOHBQ96A72 148 aaKnown RBP19.46■□□□□ 0.71
RCCD1-204ENST00000555737 GDF3Q9NR23 364 aa19.46■□□□□ 0.71
RCCD1-204ENST00000555737 DDX25Q9UHL0 483 aaKnown RBP19.46■□□□□ 0.71
RCCD1-204ENST00000555737 PRLRP16471 622 aa19.45■□□□□ 0.7
RCCD1-204ENST00000555737 PABPC4Q13310 644 aaKnown RBP eCLIP19.45■□□□□ 0.73e-8■■■■□ 22.1
RCCD1-204ENST00000555737 SBK1Q52WX2 424 aa19.45■□□□□ 0.7
RCCD1-204ENST00000555737 MICALCLQ6ZW33 695 aa19.45■□□□□ 0.7
RCCD1-204ENST00000555737 PEX26Q7Z412 305 aa19.45■□□□□ 0.7
RCCD1-204ENST00000555737 U2AF1L4Q8WU68 220 aaKnown RBP19.45■□□□□ 0.7
RCCD1-204ENST00000555737 NCAPGQ9BPX3 1015 aa19.45■□□□□ 0.7
RCCD1-204ENST00000555737 CEP72Q9P209 647 aa19.45■□□□□ 0.7
RCCD1-204ENST00000555737 PDHBP11177 359 aa19.45■□□□□ 0.7
RCCD1-204ENST00000555737 HNRNPH3P31942 346 aaKnown RBP19.45■□□□□ 0.7
RCCD1-204ENST00000555737 CDC37Q16543 378 aaPredicted RBP19.45■□□□□ 0.7
RCCD1-204ENST00000555737 SLC18A3Q16572 532 aa19.45■□□□□ 0.7
RCCD1-204ENST00000555737 CCDC13Q8IYE1 715 aa19.45■□□□□ 0.7
RCCD1-204ENST00000555737 POTEFA5A3E0 1075 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 POTEIP0CG38 1075 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 USP8P40818 1118 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 LRRC63Q05C16 580 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 DHX9Q08211 1270 aaKnown RBP19.44■□□□□ 0.7
RCCD1-204ENST00000555737 ASTE1Q2TB18 679 aaPredicted RBP19.44■□□□□ 0.7
RCCD1-204ENST00000555737 POTEGQ6S5H5 508 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 POTEEQ6S8J3 1075 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 KDM7AQ6ZMT4 941 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 CYFIP2Q96F07 1278 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 TAF1DQ9H5J8 278 aaPredicted RBP19.44■□□□□ 0.7
RCCD1-204ENST00000555737 HAUS2Q9NVX0 235 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 TMEM110-MUSTN1A8MSY1 372 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 CPP00450 1065 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 SLCO1A2P46721 670 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 CASP5P51878 434 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 SKOR1P84550 965 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 ZNF571Q7Z3V5 609 aaPredicted RBP19.44■□□□□ 0.7
RCCD1-204ENST00000555737 ANKS1AQ92625 1134 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 TBC1D31Q96DN5 1066 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 TOGARAM1Q9Y4F4 1720 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 MEI1Q5TIA1 1274 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 EMILIN3Q9NT22 766 aa19.44■□□□□ 0.7
RCCD1-204ENST00000555737 BRD2P25440 801 aaKnown RBP19.43■□□□□ 0.7
RCCD1-204ENST00000555737 ALKBH5Q6P6C2 394 aaKnown RBP19.43■□□□□ 0.7
RCCD1-204ENST00000555737 TAX1BP1Q86VP1 789 aa19.43■□□□□ 0.7
RCCD1-204ENST00000555737 MAGEF1Q9HAY2 307 aa19.43■□□□□ 0.7
RCCD1-204ENST00000555737 NOC2LQ9Y3T9 749 aaKnown RBP19.43■□□□□ 0.7
RCCD1-204ENST00000555737 OPLAHO14841 1288 aa19.43■□□□□ 0.7
RCCD1-204ENST00000555737 GFPT2O94808 682 aa19.43■□□□□ 0.7
RCCD1-204ENST00000555737 RPSAP08865 295 aaKnown RBP19.43■□□□□ 0.7
RCCD1-204ENST00000555737 IFNAR2P48551 515 aa19.43■□□□□ 0.7
RCCD1-204ENST00000555737 GALNT17Q6IS24 598 aa19.43■□□□□ 0.7
RCCD1-204ENST00000555737 DPP8Q6V1X1 898 aaPredicted RBP19.43■□□□□ 0.7
RCCD1-204ENST00000555737 METTL13Q8N6R0 699 aa19.43■□□□□ 0.7
RCCD1-204ENST00000555737 INPP4AQ96PE3 977 aaPredicted RBP19.43■□□□□ 0.7
RCCD1-204ENST00000555737 CNOT8Q9UFF9 292 aaKnown RBP19.43■□□□□ 0.7
RCCD1-204ENST00000555737 RTCBQ9Y3I0 505 aaKnown RBP19.43■□□□□ 0.7
RCCD1-204ENST00000555737 ITGB3BPQ13352 177 aaPredicted RBP19.42■□□□□ 0.7
RCCD1-204ENST00000555737 PLS1Q14651 629 aa19.42■□□□□ 0.7
RCCD1-204ENST00000555737 RNF10Q8N5U6 811 aaKnown RBP19.42■□□□□ 0.7
RCCD1-204ENST00000555737 RDH13Q8NBN7 331 aa19.42■□□□□ 0.7
RCCD1-204ENST00000555737 PARP4Q9UKK3 1724 aaKnown RBP19.42■□□□□ 0.7
RCCD1-204ENST00000555737 BUB1BO60566 1050 aaPredicted RBP19.42■□□□□ 0.7
RCCD1-204ENST00000555737 EPB41P11171 864 aaKnown RBP19.42■□□□□ 0.7
RCCD1-204ENST00000555737 GIMAP7Q8NHV1 300 aa19.42■□□□□ 0.7
RCCD1-204ENST00000555737 FAM212AQ96EL1 285 aa19.42■□□□□ 0.7
RCCD1-204ENST00000555737 HDAC9Q9UKV0 1011 aa19.42■□□□□ 0.7
RCCD1-204ENST00000555737 NR2E1Q9Y466 385 aa19.42■□□□□ 0.7
RCCD1-204ENST00000555737 PVALEFA0A1B0GWK0 134 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms