RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 ADCY3O60266 1144 aa7.63□□□□□ -1.19
VRK1-205ENST00000555402 B4GALT4O60513 344 aa7.63□□□□□ -1.19
VRK1-205ENST00000555402 ITGAVP06756 1048 aa7.63□□□□□ -1.19
VRK1-205ENST00000555402 GYS2P54840 703 aa7.63□□□□□ -1.19
VRK1-205ENST00000555402 ZC3H12BQ5HYM0 836 aaKnown RBP7.63□□□□□ -1.19
VRK1-205ENST00000555402 FILIP1Q7Z7B0 1213 aa7.63□□□□□ -1.19
VRK1-205ENST00000555402 BVESQ8NE79 360 aa7.63□□□□□ -1.19
VRK1-205ENST00000555402 Q8TCH9 128 aa7.63□□□□□ -1.19
VRK1-205ENST00000555402 FEZ1Q99689 392 aa7.63□□□□□ -1.19
VRK1-205ENST00000555402 LGR4Q9BXB1 951 aa7.63□□□□□ -1.19
VRK1-205ENST00000555402 ZNF341Q9BYN7 854 aa7.63□□□□□ -1.19
VRK1-205ENST00000555402 AKT3Q9Y243 479 aa7.63□□□□□ -1.19
VRK1-205ENST00000555402 TRAV20A0A0B4J274 112 aa7.62□□□□□ -1.19
VRK1-205ENST00000555402 IBSPP21815 317 aaPredicted RBP7.62□□□□□ -1.19
VRK1-205ENST00000555402 PPP2R2AP63151 447 aa7.62□□□□□ -1.19
VRK1-205ENST00000555402 FHL2Q14192 279 aa7.62□□□□□ -1.19
VRK1-205ENST00000555402 INF2Q27J81 1249 aa7.62□□□□□ -1.19
VRK1-205ENST00000555402 KIAA0907Q7Z7F0 614 aaPredicted RBP7.62□□□□□ -1.19
VRK1-205ENST00000555402 ZNF227Q86WZ6 799 aa7.62□□□□□ -1.19
VRK1-205ENST00000555402 SYNPOQ8N3V7 929 aa7.62□□□□□ -1.19
VRK1-205ENST00000555402 ZSWIM3Q96MP5 696 aa7.62□□□□□ -1.19
VRK1-205ENST00000555402 YIPF4Q9BSR8 244 aa7.62□□□□□ -1.19
VRK1-205ENST00000555402 AARSD1Q9BTE6 412 aaKnown RBP7.62□□□□□ -1.19
VRK1-205ENST00000555402 SPC25Q9HBM1 224 aa7.62□□□□□ -1.19
VRK1-205ENST00000555402 C11orf21Q9P2W6 132 aa7.62□□□□□ -1.19
VRK1-205ENST00000555402 SCRN1Q12765 414 aa7.61□□□□□ -1.19
VRK1-205ENST00000555402 PTPROQ16827 1216 aa7.61□□□□□ -1.19
VRK1-205ENST00000555402 C21orf62-AS1Q17RA5 79 aa7.61□□□□□ -1.19
VRK1-205ENST00000555402 TKFCQ3LXA3 575 aa7.61□□□□□ -1.19
VRK1-205ENST00000555402 MROH9Q5TGP6 573 aa7.61□□□□□ -1.19
VRK1-205ENST00000555402 RIOX2Q8IUF8 465 aa7.61□□□□□ -1.19
VRK1-205ENST00000555402 KLHL36Q8N4N3 616 aa7.61□□□□□ -1.19
VRK1-205ENST00000555402 CRACR2BQ8N4Y2 399 aaPredicted RBP7.61□□□□□ -1.19
VRK1-205ENST00000555402 ZCCHC14Q8WYQ9 949 aaKnown RBP7.61□□□□□ -1.19
VRK1-205ENST00000555402 CLIC6Q96NY7 704 aa7.61□□□□□ -1.19
VRK1-205ENST00000555402 ARHGEF4Q9NR80 690 aa7.61□□□□□ -1.19
VRK1-205ENST00000555402 PRKAB1Q9Y478 270 aa7.61□□□□□ -1.19
VRK1-205ENST00000555402 CD2APQ9Y5K6 639 aa7.61□□□□□ -1.19
VRK1-205ENST00000555402 CCDC163A0A0D9SF12 145 aa7.6□□□□□ -1.19
VRK1-205ENST00000555402 NPIPB8E9PQR5 432 aa7.6□□□□□ -1.19
VRK1-205ENST00000555402 DNAJC6O75061 913 aa7.6□□□□□ -1.19
VRK1-205ENST00000555402 CYP7B1O75881 506 aa7.6□□□□□ -1.19
VRK1-205ENST00000555402 FAM209AQ5JX71 171 aa7.6□□□□□ -1.19
VRK1-205ENST00000555402 YOD1Q5VVQ6 348 aaPredicted RBP7.6□□□□□ -1.19
VRK1-205ENST00000555402 POMZP3Q6PJE2 187 aa7.6□□□□□ -1.19
VRK1-205ENST00000555402 ZNF513Q8N8E2 541 aaPredicted RBP7.6□□□□□ -1.19
VRK1-205ENST00000555402 ZCRB1Q8TBF4 217 aaKnown RBP7.6□□□□□ -1.19
VRK1-205ENST00000555402 DHRS4Q9BTZ2 278 aa7.6□□□□□ -1.19
VRK1-205ENST00000555402 MEGF9Q9H1U4 602 aa7.6□□□□□ -1.19
VRK1-205ENST00000555402 IFT57Q9NWB7 429 aa7.6□□□□□ -1.19
VRK1-205ENST00000555402 CROTQ9UKG9 612 aa7.6□□□□□ -1.19
VRK1-205ENST00000555402 ZDHHC9Q9Y397 364 aa7.6□□□□□ -1.19
VRK1-205ENST00000555402 TRBV23-1A0A0A0MS06 115 aa7.59□□□□□ -1.19
VRK1-205ENST00000555402 PRODHO43272 600 aa7.59□□□□□ -1.19
VRK1-205ENST00000555402 KCNH1O95259 989 aa7.59□□□□□ -1.19
VRK1-205ENST00000555402 FPR2P25090 351 aa7.59□□□□□ -1.19
VRK1-205ENST00000555402 NFATC3Q12968 1075 aa7.59□□□□□ -1.19
VRK1-205ENST00000555402 FOXE3Q13461 319 aa7.59□□□□□ -1.19
VRK1-205ENST00000555402 FOXB2Q5VYV0 432 aa7.59□□□□□ -1.19
VRK1-205ENST00000555402 SCUBE1Q8IWY4 988 aa7.59□□□□□ -1.19
VRK1-205ENST00000555402 TOE1Q96GM8 510 aaKnown RBP7.59□□□□□ -1.19
VRK1-205ENST00000555402 FTSJ1Q9UET6 329 aa7.59□□□□□ -1.19
VRK1-205ENST00000555402 X6R8D5 127 aa7.59□□□□□ -1.19
VRK1-205ENST00000555402 hCG_2014768A0A024R1R8 64 aa7.58□□□□□ -1.2
VRK1-205ENST00000555402 TBX1O43435 398 aa7.58□□□□□ -1.2
VRK1-205ENST00000555402 NSMFQ6X4W1 530 aa7.58□□□□□ -1.2
VRK1-205ENST00000555402 EXOC2Q96KP1 924 aa7.58□□□□□ -1.2
VRK1-205ENST00000555402 EMC9Q9Y3B6 208 aa7.58□□□□□ -1.2
VRK1-205ENST00000555402 MRPS23Q9Y3D9 190 aaKnown RBP7.58□□□□□ -1.2
VRK1-205ENST00000555402 TIMM13Q9Y5L4 95 aaPredicted RBP7.58□□□□□ -1.2
VRK1-205ENST00000555402 TGM1P22735 817 aa7.57□□□□□ -1.2
VRK1-205ENST00000555402 GRIA2P42262 883 aa7.57□□□□□ -1.2
VRK1-205ENST00000555402 RPL11P62913 178 aaKnown RBP7.57□□□□□ -1.2
VRK1-205ENST00000555402 IGBP1P78318 339 aa7.57□□□□□ -1.2
VRK1-205ENST00000555402 SMN1Q16637 294 aaKnown RBP7.57□□□□□ -1.2
VRK1-205ENST00000555402 CEP68Q76N32 757 aa7.57□□□□□ -1.2
VRK1-205ENST00000555402 TRIM59Q8IWR1 403 aa7.57□□□□□ -1.2
VRK1-205ENST00000555402 BTN2A2Q8WVV5 523 aa7.57□□□□□ -1.2
VRK1-205ENST00000555402 GPATCH3Q96I76 525 aa7.57□□□□□ -1.2
VRK1-205ENST00000555402 MRGPRX3Q96LB0 322 aa7.57□□□□□ -1.2
VRK1-205ENST00000555402 IER2Q9BTL4 223 aa7.57□□□□□ -1.2
VRK1-205ENST00000555402 TMX1Q9H3N1 280 aa7.57□□□□□ -1.2
VRK1-205ENST00000555402 BARX1Q9HBU1 254 aaPredicted RBP7.57□□□□□ -1.2
VRK1-205ENST00000555402 DTLQ9NZJ0 730 aa7.57□□□□□ -1.2
VRK1-205ENST00000555402 PLAAQ9Y263 795 aa7.57□□□□□ -1.2
VRK1-205ENST00000555402 ZNF652Q9Y2D9 606 aa7.57□□□□□ -1.2
VRK1-205ENST00000555402 RAPGEF3O95398 923 aa7.56□□□□□ -1.2
VRK1-205ENST00000555402 FGFR1P11362 822 aa7.56□□□□□ -1.2
VRK1-205ENST00000555402 PABPC1P11940 636 aaKnown RBP7.56□□□□□ -1.2
VRK1-205ENST00000555402 KCNJ6P48051 423 aa7.56□□□□□ -1.2
VRK1-205ENST00000555402 ANAPC15P60006 121 aa7.56□□□□□ -1.2
VRK1-205ENST00000555402 DALRD3Q5D0E6 543 aaKnown RBP7.56□□□□□ -1.2
VRK1-205ENST00000555402 TRMT10BQ6PF06 316 aaKnown RBP7.56□□□□□ -1.2
VRK1-205ENST00000555402 TEPPQ6URK8 271 aa7.56□□□□□ -1.2
VRK1-205ENST00000555402 Q8N1Y9 231 aa7.56□□□□□ -1.2
VRK1-205ENST00000555402 TRMT2BQ96GJ1 504 aaKnown RBP7.56□□□□□ -1.2
VRK1-205ENST00000555402 COL4A3BPQ9Y5P4 624 aa7.56□□□□□ -1.2
VRK1-205ENST00000555402 MASP1P48740 699 aa7.55□□□□□ -1.2
VRK1-205ENST00000555402 SUMO1P63165 101 aaKnown RBP7.55□□□□□ -1.2
VRK1-205ENST00000555402 PURAQ00577 322 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms