RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 TXKP42681 527 aa14.31□□□□□ -0.12
SYNE2-219ENST00000555323 MNX1P50219 401 aaPredicted RBP14.31□□□□□ -0.12
SYNE2-219ENST00000555323 FXR2P51116 673 aaKnown RBP eCLIP14.31□□□□□ -0.123e-6■■□□□ 14.2
SYNE2-219ENST00000555323 ACTR2P61160 394 aa14.31□□□□□ -0.12
SYNE2-219ENST00000555323 PDIA5Q14554 519 aa14.31□□□□□ -0.12
SYNE2-219ENST00000555323 SLC39A14Q15043 492 aa14.31□□□□□ -0.12
SYNE2-219ENST00000555323 DGKDQ16760 1214 aa14.31□□□□□ -0.12
SYNE2-219ENST00000555323 ABHD15Q6UXT9 468 aa14.31□□□□□ -0.12
SYNE2-219ENST00000555323 TNS4Q8IZW8 715 aa14.31□□□□□ -0.12
SYNE2-219ENST00000555323 LINC00301Q8NCQ3 95 aa14.31□□□□□ -0.12
SYNE2-219ENST00000555323 UIMC1Q96RL1 719 aa14.31□□□□□ -0.12
SYNE2-219ENST00000555323 CFAP45Q9UL16 551 aa14.31□□□□□ -0.12
SYNE2-219ENST00000555323 TELO2Q9Y4R8 837 aa14.31□□□□□ -0.12
SYNE2-219ENST00000555323 PCDHA10Q9Y5I2 948 aa14.31□□□□□ -0.12
SYNE2-219ENST00000555323 BRCA2P51587 3418 aa14.3□□□□□ -0.12
SYNE2-219ENST00000555323 MOXD2PA6NHM9 499 aa14.3□□□□□ -0.12
SYNE2-219ENST00000555323 NOP56O00567 594 aaKnown RBP14.3□□□□□ -0.12
SYNE2-219ENST00000555323 LGR5O75473 907 aa14.3□□□□□ -0.12
SYNE2-219ENST00000555323 YEATS4O95619 227 aa14.3□□□□□ -0.12
SYNE2-219ENST00000555323 JAK3P52333 1124 aa14.3□□□□□ -0.12
SYNE2-219ENST00000555323 BEX3Q00994 111 aa14.3□□□□□ -0.12
SYNE2-219ENST00000555323 DNM1Q05193 864 aaKnown RBP14.3□□□□□ -0.12
SYNE2-219ENST00000555323 KCNA10Q16322 511 aa14.3□□□□□ -0.12
SYNE2-219ENST00000555323 IL17AQ16552 155 aa14.3□□□□□ -0.12
SYNE2-219ENST00000555323 DTHD1Q6ZMT9 781 aa14.3□□□□□ -0.12
SYNE2-219ENST00000555323 IGSF22Q8N9C0 903 aa14.3□□□□□ -0.12
SYNE2-219ENST00000555323 C16orf70Q9BSU1 422 aa14.3□□□□□ -0.12
SYNE2-219ENST00000555323 FTOQ9C0B1 505 aaKnown RBP eCLIP14.3□□□□□ -0.12
SYNE2-219ENST00000555323 UNC45AQ9H3U1 944 aa14.3□□□□□ -0.12
SYNE2-219ENST00000555323 DISC1Q9NRI5 854 aa14.3□□□□□ -0.12
SYNE2-219ENST00000555323 TFIP11Q9UBB9 837 aaKnown RBP14.3□□□□□ -0.12
SYNE2-219ENST00000555323 RCOR1Q9UKL0 485 aa14.3□□□□□ -0.12
SYNE2-219ENST00000555323 ELP1O95163 1332 aa14.3□□□□□ -0.12
SYNE2-219ENST00000555323 WDR64B1ANS9 1081 aa14.29□□□□□ -0.12
SYNE2-219ENST00000555323 DDX39AO00148 427 aaKnown RBP14.29□□□□□ -0.12
SYNE2-219ENST00000555323 EML1O00423 815 aa14.29□□□□□ -0.12
SYNE2-219ENST00000555323 SORBS3O60504 671 aa14.29□□□□□ -0.12
SYNE2-219ENST00000555323 PPP6R2O75170 966 aa14.29□□□□□ -0.12
SYNE2-219ENST00000555323 CABYRO75952 493 aa14.29□□□□□ -0.12
SYNE2-219ENST00000555323 ASGR1P07306 291 aa14.29□□□□□ -0.12
SYNE2-219ENST00000555323 TCF7P36402 384 aaPredicted RBP14.29□□□□□ -0.12
SYNE2-219ENST00000555323 TECP42680 631 aa14.29□□□□□ -0.12
SYNE2-219ENST00000555323 PURAQ00577 322 aaKnown RBP14.29□□□□□ -0.12
SYNE2-219ENST00000555323 EPHA7Q15375 998 aa14.29□□□□□ -0.12
SYNE2-219ENST00000555323 PLPPR4Q7Z2D5 763 aa14.29□□□□□ -0.12
SYNE2-219ENST00000555323 AFAP1L1Q8TED9 768 aa14.29□□□□□ -0.12
SYNE2-219ENST00000555323 PCYT2Q99447 389 aa14.29□□□□□ -0.12
SYNE2-219ENST00000555323 TCEAL9Q9UHQ7 104 aa14.29□□□□□ -0.12
SYNE2-219ENST00000555323 PHF24Q9UPV7 400 aa14.29□□□□□ -0.12
SYNE2-219ENST00000555323 SRPRBQ9Y5M8 271 aaKnown RBP14.29□□□□□ -0.12
SYNE2-219ENST00000555323 MAFBQ9Y5Q3 323 aaPredicted RBP14.29□□□□□ -0.12
SYNE2-219ENST00000555323 HAS3O00219 553 aa14.28□□□□□ -0.12
SYNE2-219ENST00000555323 PSAPP07602 524 aa14.28□□□□□ -0.12
SYNE2-219ENST00000555323 SUPT20HL2P0C7V6 817 aa14.28□□□□□ -0.12
SYNE2-219ENST00000555323 COL6A1P12109 1028 aa14.28□□□□□ -0.12
SYNE2-219ENST00000555323 ACLYP53396 1101 aa14.28□□□□□ -0.12
SYNE2-219ENST00000555323 KRT85P78386 507 aa14.28□□□□□ -0.12
SYNE2-219ENST00000555323 CEBPZQ03701 1054 aaKnown RBP14.28□□□□□ -0.12
SYNE2-219ENST00000555323 MIS18BP1Q6P0N0 1132 aa14.28□□□□□ -0.12
SYNE2-219ENST00000555323 EMSYQ7Z589 1322 aa14.28□□□□□ -0.12
SYNE2-219ENST00000555323 UBE2Q1Q7Z7E8 422 aa14.28□□□□□ -0.12
SYNE2-219ENST00000555323 KAT2BQ92831 832 aa14.28□□□□□ -0.12
SYNE2-219ENST00000555323 FERMT2Q96AC1 680 aa14.28□□□□□ -0.12
SYNE2-219ENST00000555323 HSD17B14Q9BPX1 270 aa14.28□□□□□ -0.12
SYNE2-219ENST00000555323 MTG1Q9BT17 334 aaPredicted RBP14.28□□□□□ -0.12
SYNE2-219ENST00000555323 SMARCAD1Q9H4L7 1026 aa14.28□□□□□ -0.12
SYNE2-219ENST00000555323 KBTBD13C9JR72 458 aa14.27□□□□□ -0.13
SYNE2-219ENST00000555323 H3BRB1 525 aa14.27□□□□□ -0.13
SYNE2-219ENST00000555323 SPTLC2O15270 562 aa14.27□□□□□ -0.13
SYNE2-219ENST00000555323 F2P00734 622 aa14.27□□□□□ -0.13
SYNE2-219ENST00000555323 LGALS2P05162 132 aa14.27□□□□□ -0.13
SYNE2-219ENST00000555323 EN2P19622 333 aaPredicted RBP14.27□□□□□ -0.13
SYNE2-219ENST00000555323 SLC26A2P50443 739 aa14.27□□□□□ -0.13
SYNE2-219ENST00000555323 STAT5BP51692 787 aa14.27□□□□□ -0.13
SYNE2-219ENST00000555323 SP4Q02446 784 aa14.27□□□□□ -0.13
SYNE2-219ENST00000555323 TMEM266Q2M3C6 531 aa14.27□□□□□ -0.13
SYNE2-219ENST00000555323 FOXD4L6Q3SYB3 417 aaPredicted RBP14.27□□□□□ -0.13
SYNE2-219ENST00000555323 SWSAP1Q6NVH7 229 aa14.27□□□□□ -0.13
SYNE2-219ENST00000555323 CXCL17Q6UXB2 119 aa14.27□□□□□ -0.13
SYNE2-219ENST00000555323 FOXD4L3Q6VB84 417 aaPredicted RBP14.27□□□□□ -0.13
SYNE2-219ENST00000555323 MIER3Q7Z3K6 550 aa14.27□□□□□ -0.13
SYNE2-219ENST00000555323 AK8Q96MA6 479 aa14.27□□□□□ -0.13
SYNE2-219ENST00000555323 RAB34Q9BZG1 259 aa14.27□□□□□ -0.13
SYNE2-219ENST00000555323 TUT1Q9H6E5 874 aaKnown RBP14.27□□□□□ -0.13
SYNE2-219ENST00000555323 FBXO2Q9UK22 296 aaPredicted RBP14.27□□□□□ -0.13
SYNE2-219ENST00000555323 STK24Q9Y6E0 443 aa14.27□□□□□ -0.13
SYNE2-219ENST00000555323 KIAA0100Q14667 2235 aaKnown RBP14.27□□□□□ -0.13
SYNE2-219ENST00000555323 POTEMA6NI47 508 aa14.26□□□□□ -0.13
SYNE2-219ENST00000555323 SLITRK3O94933 977 aa14.26□□□□□ -0.13
SYNE2-219ENST00000555323 P4HBP07237 508 aaKnown RBP14.26□□□□□ -0.13
SYNE2-219ENST00000555323 MYL3P08590 195 aa14.26□□□□□ -0.13
SYNE2-219ENST00000555323 MARCKSP29966 332 aaPredicted RBP14.26□□□□□ -0.13
SYNE2-219ENST00000555323 LONP1P36776 959 aaKnown RBP14.26□□□□□ -0.13
SYNE2-219ENST00000555323 STK38Q15208 465 aa14.26□□□□□ -0.13
SYNE2-219ENST00000555323 CCDC60Q8IWA6 550 aaPredicted RBP14.26□□□□□ -0.13
SYNE2-219ENST00000555323 NEK9Q8TD19 979 aa14.26□□□□□ -0.13
SYNE2-219ENST00000555323 KCNG4Q8TDN1 519 aa14.26□□□□□ -0.13
SYNE2-219ENST00000555323 GLT1D1Q96MS3 346 aa14.26□□□□□ -0.13
SYNE2-219ENST00000555323 KATNAL1Q9BW62 490 aa14.26□□□□□ -0.13
SYNE2-219ENST00000555323 SEZ6LQ9BYH1 1024 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms