RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 CHSY1Q86X52 802 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 CYLDQ9NQC7 956 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 ZNF532Q9HCE3 1301 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 TLR3O15455 904 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 ORC4O43929 436 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SYN1P17600 705 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 PPWD1Q96BP3 646 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 ZNF341Q9BYN7 854 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 MIR1-1HGQ9H1L0 117 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 KCNA2P16389 499 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 CCDC102BQ68D86 513 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 CCDC62Q6P9F0 684 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SNX29Q8TEQ0 813 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SUCLG2Q96I99 432 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SNX6Q9UNH7 406 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 IL16Q14005 1332 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 ETFBP38117 255 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SCNN1BP51168 640 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 MYO1EQ12965 1108 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 PABPC4Q13310 644 aaKnown RBP eCLIP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 DALRD3Q5D0E6 543 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 RNASE12Q5GAN4 147 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 KRT12Q99456 494 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 MIS12Q9H081 205 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 INVSQ9Y283 1065 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 GOLGA8MH3BSY2 632 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 RECQLP46063 649 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 CCDC42Q96M95 316 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 ALDH8A1Q9H2A2 487 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 ZNF263O14978 683 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 ARMCX6Q7L4S7 300 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 KAT2BQ92831 832 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 RAB20Q9NX57 234 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 DMRT2Q9Y5R5 561 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 CADP27708 2225 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 MYO1GB0I1T2 1018 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 USP17L12C9JPN9 530 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 USP17L21D6R901 530 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SERPINB2P05120 415 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 TCF3P15923 654 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 PI4KAP42356 2102 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 MTX1Q13505 466 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 RASEFQ8IZ41 740 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 SNX31Q8N9S9 440 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 FAF2Q96CS3 445 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 PIGSQ96S52 555 aa3.57□□□□□ -1.84
SYNE2-212ENST00000554584 UNKQ9C0B0 810 aaKnown RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 STMN4Q9H169 189 aaPredicted RBP3.57□□□□□ -1.84
SYNE2-212ENST00000554584 MOXD2PA6NHM9 499 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 IRF6O14896 467 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 SOAT1P35610 550 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 TMPRSS15P98073 1019 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ZNF746Q6NUN9 644 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 CDC37L1Q7L3B6 337 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 SAMD7Q7Z3H4 446 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 RPGRIP1Q96KN7 1286 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 TCHHQ07283 1943 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ARF3P61204 181 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ARF1P84077 181 aaKnown RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 TMED2Q15363 201 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 TSNAXIP1Q2TAA8 658 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 CYP4X1Q8N118 509 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 PTPN22Q9Y2R2 807 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 NPHP3-ACAD11A0A0J9YXS1 232 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 POLE2P56282 527 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 PTK2Q05397 1052 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 DMTNQ08495 405 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 SLC44A4Q53GD3 710 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 HERC4Q5GLZ8 1057 aaPredicted RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 FYB2Q5VWT5 728 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 C11orf88Q6PI97 169 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 EHBP1Q8NDI1 1231 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 RAET1EQ8TD07 263 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 LRWD1Q9UFC0 647 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 TYW5A2RUC4 315 aaKnown RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 USP17L3A6NCW0 530 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 USP17L4A6NCW7 530 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 CELF2O95319 508 aaKnown RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 SDSP20132 328 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 DDIT3P35638 169 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 TFAMQ00059 246 aaKnown RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 BBS9Q3SYG4 887 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 USP17L1Q7RTZ2 530 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 NLRX1Q86UT6 975 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ATP6V0A1Q93050 837 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 CEP19Q96LK0 163 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 RTL1A6NKG5 1358 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ARL3P36405 182 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 EZH2Q15910 746 aaKnown RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ARMC6Q6NXE6 501 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 TRIM67Q6ZTA4 783 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 CCNYL1Q8N7R7 359 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 PIP4K2CQ8TBX8 421 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 IL1RAPL1Q9NZN1 696 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 DBN1Q16643 649 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 SEZ6Q53EL9 994 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ABCG8Q9H221 673 aa3.56□□□□□ -1.84
SYNE2-212ENST00000554584 NGRNQ9NPE2 291 aaKnown RBP3.56□□□□□ -1.84
SYNE2-212ENST00000554584 ZBTB1Q9Y2K1 713 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms