RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 PCDHGC5Q9Y5F6 944 aa11.25□□□□□ -0.61
CHD8-205ENST00000553651 MRPL42Q9Y6G3 142 aaKnown RBP11.25□□□□□ -0.61
CHD8-205ENST00000553651 KMT2BQ9UMN6 2715 aaPredicted RBP11.24□□□□□ -0.61
CHD8-205ENST00000553651 PLXNA4Q9HCM2 1894 aa11.24□□□□□ -0.61
CHD8-205ENST00000553651 FGAP02671 866 aa11.24□□□□□ -0.61
CHD8-205ENST00000553651 ATF7P17544 494 aaPredicted RBP11.24□□□□□ -0.61
CHD8-205ENST00000553651 NRIP1P48552 1158 aa11.24□□□□□ -0.61
CHD8-205ENST00000553651 RBM10P98175 930 aaKnown RBP11.24□□□□□ -0.61
CHD8-205ENST00000553651 MGAT3Q09327 533 aa11.24□□□□□ -0.61
CHD8-205ENST00000553651 LPIN1Q14693 890 aa11.24□□□□□ -0.61
CHD8-205ENST00000553651 QRICH1Q2TAL8 776 aa11.24□□□□□ -0.61
CHD8-205ENST00000553651 VSIG10LQ86VR7 867 aa11.24□□□□□ -0.61
CHD8-205ENST00000553651 MCF2L2Q86YR7 1114 aa11.24□□□□□ -0.61
CHD8-205ENST00000553651 ADGRF4Q8IZF3 695 aa11.24□□□□□ -0.61
CHD8-205ENST00000553651 OTUD7AQ8TE49 926 aaPredicted RBP11.24□□□□□ -0.61
CHD8-205ENST00000553651 GPATCH3Q96I76 525 aa11.24□□□□□ -0.61
CHD8-205ENST00000553651 RPGRIP1Q96KN7 1286 aa11.24□□□□□ -0.61
CHD8-205ENST00000553651 RIPOR3Q96MK2 946 aa11.24□□□□□ -0.61
CHD8-205ENST00000553651 DCTPP1Q9H773 170 aa11.24□□□□□ -0.61
CHD8-205ENST00000553651 SETD4Q9NVD3 440 aa11.24□□□□□ -0.61
CHD8-205ENST00000553651 TRPC6Q9Y210 931 aa11.24□□□□□ -0.61
CHD8-205ENST00000553651 TELO2Q9Y4R8 837 aa11.24□□□□□ -0.61
CHD8-205ENST00000553651 MYH6P13533 1939 aa11.23□□□□□ -0.61
CHD8-205ENST00000553651 FRYLO94915 3013 aa11.23□□□□□ -0.61
CHD8-205ENST00000553651 TGFB3P10600 412 aa11.23□□□□□ -0.61
CHD8-205ENST00000553651 HSPD1P10809 573 aaKnown RBP11.23□□□□□ -0.61
CHD8-205ENST00000553651 GHRP10912 638 aa11.23□□□□□ -0.61
CHD8-205ENST00000553651 MS4A1P11836 297 aa11.23□□□□□ -0.61
CHD8-205ENST00000553651 BTG3Q14201 252 aaPredicted RBP11.23□□□□□ -0.61
CHD8-205ENST00000553651 NAALADL2Q58DX5 795 aa11.23□□□□□ -0.61
CHD8-205ENST00000553651 RRP12Q5JTH9 1297 aaKnown RBP11.23□□□□□ -0.61
CHD8-205ENST00000553651 KCNV1Q6PIU1 500 aa11.23□□□□□ -0.61
CHD8-205ENST00000553651 STOX1Q6ZVD7 989 aa11.23□□□□□ -0.61
CHD8-205ENST00000553651 RTN4RL1Q86UN2 441 aaPredicted RBP11.23□□□□□ -0.61
CHD8-205ENST00000553651 TMEM105Q8N8V8 129 aa11.23□□□□□ -0.61
CHD8-205ENST00000553651 KLHL23Q8NBE8 558 aa11.23□□□□□ -0.61
CHD8-205ENST00000553651 TTC41PQ6P2S7 1318 aa11.23□□□□□ -0.61
CHD8-205ENST00000553651 DOCK5Q9H7D0 1870 aa11.23□□□□□ -0.61
CHD8-205ENST00000553651 MYO10Q9HD67 2058 aa11.23□□□□□ -0.61
CHD8-205ENST00000553651 PPP1R11O60927 126 aaPredicted RBP11.22□□□□□ -0.61
CHD8-205ENST00000553651 TPRP12270 2363 aaKnown RBP11.22□□□□□ -0.61
CHD8-205ENST00000553651 SEMA3FQ13275 785 aa11.22□□□□□ -0.61
CHD8-205ENST00000553651 KCNC3Q14003 757 aa11.22□□□□□ -0.61
CHD8-205ENST00000553651 PGM5Q15124 567 aa11.22□□□□□ -0.61
CHD8-205ENST00000553651 RUFY4Q6ZNE9 571 aa11.22□□□□□ -0.61
CHD8-205ENST00000553651 RBM23Q86U06 439 aaKnown RBP11.22□□□□□ -0.61
CHD8-205ENST00000553651 TRIM50Q86XT4 487 aa11.22□□□□□ -0.61
CHD8-205ENST00000553651 TBC1D10CQ8IV04 446 aa11.22□□□□□ -0.61
CHD8-205ENST00000553651 CMTR2Q8IYT2 770 aaKnown RBP11.22□□□□□ -0.61
CHD8-205ENST00000553651 LMBR1Q8WVP7 490 aa11.22□□□□□ -0.61
CHD8-205ENST00000553651 POF1BQ8WVV4 589 aa11.22□□□□□ -0.61
CHD8-205ENST00000553651 ZFP91Q96JP5 570 aaPredicted RBP11.22□□□□□ -0.61
CHD8-205ENST00000553651 S1PR5Q9H228 398 aa11.22□□□□□ -0.61
CHD8-205ENST00000553651 JMJD4Q9H9V9 463 aa11.22□□□□□ -0.61
CHD8-205ENST00000553651 TOMM22Q9NS69 142 aa11.22□□□□□ -0.61
CHD8-205ENST00000553651 MRPL11Q9Y3B7 192 aaKnown RBP11.22□□□□□ -0.61
CHD8-205ENST00000553651 CEP250Q9BV73 2442 aa11.21□□□□□ -0.61
CHD8-205ENST00000553651 ZMYM6O95789 1325 aa11.21□□□□□ -0.61
CHD8-205ENST00000553651 SALL3Q9BXA9 1300 aa11.21□□□□□ -0.61
CHD8-205ENST00000553651 CFBP00751 764 aa11.21□□□□□ -0.61
CHD8-205ENST00000553651 MYCLP12524 364 aaPredicted RBP11.21□□□□□ -0.61
CHD8-205ENST00000553651 ID4P47928 161 aa11.21□□□□□ -0.61
CHD8-205ENST00000553651 FBXO47Q5MNV8 452 aa11.21□□□□□ -0.61
CHD8-205ENST00000553651 PPP2R3CQ969Q6 453 aa11.21□□□□□ -0.61
CHD8-205ENST00000553651 GPR20Q99678 358 aa11.21□□□□□ -0.61
CHD8-205ENST00000553651 AGO3Q9H9G7 860 aaKnown RBP11.21□□□□□ -0.61
CHD8-205ENST00000553651 NEDD4P46934 1319 aa11.2□□□□□ -0.62
CHD8-205ENST00000553651 CCDC171Q6TFL3 1326 aa11.2□□□□□ -0.62
CHD8-205ENST00000553651 PER2O15055 1255 aa11.2□□□□□ -0.62
CHD8-205ENST00000553651 KDM4AO75164 1064 aa11.2□□□□□ -0.62
CHD8-205ENST00000553651 ARP10275 920 aa11.2□□□□□ -0.62
CHD8-205ENST00000553651 GNAT1P11488 350 aa11.2□□□□□ -0.62
CHD8-205ENST00000553651 GATMP50440 423 aa11.2□□□□□ -0.62
CHD8-205ENST00000553651 HAND2P61296 217 aa11.2□□□□□ -0.62
CHD8-205ENST00000553651 TMEM184AQ6ZMB5 413 aa11.2□□□□□ -0.62
CHD8-205ENST00000553651 FRMD5Q7Z6J6 570 aa11.2□□□□□ -0.62
CHD8-205ENST00000553651 DGKHQ86XP1 1220 aa11.2□□□□□ -0.62
CHD8-205ENST00000553651 PNMA1Q8ND90 353 aa11.2□□□□□ -0.62
CHD8-205ENST00000553651 MTMR8Q96EF0 704 aa11.2□□□□□ -0.62
CHD8-205ENST00000553651 ZKSCAN3Q9BRR0 538 aa11.2□□□□□ -0.62
CHD8-205ENST00000553651 USP26Q9BXU7 913 aa11.2□□□□□ -0.62
CHD8-205ENST00000553651 MLXIPQ9HAP2 919 aa11.2□□□□□ -0.62
CHD8-205ENST00000553651 DNAH14Q0VDD8 3507 aa11.2□□□□□ -0.62
CHD8-205ENST00000553651 KAT6AQ92794 2004 aa11.19□□□□□ -0.62
CHD8-205ENST00000553651 MED19A0JLT2 244 aaPredicted RBP11.19□□□□□ -0.62
CHD8-205ENST00000553651 BRD1O95696 1058 aa11.19□□□□□ -0.62
CHD8-205ENST00000553651 HOXA13P31271 388 aaPredicted RBP11.19□□□□□ -0.62
CHD8-205ENST00000553651 MRPS9P82933 396 aaKnown RBP11.19□□□□□ -0.62
CHD8-205ENST00000553651 ARHGAP4P98171 946 aa11.19□□□□□ -0.62
CHD8-205ENST00000553651 DUSP6Q16828 381 aa11.19□□□□□ -0.62
CHD8-205ENST00000553651 SLC35G1Q2M3R5 365 aa11.19□□□□□ -0.62
CHD8-205ENST00000553651 C20orf194Q5TEA3 1177 aa11.19□□□□□ -0.62
CHD8-205ENST00000553651 SYCE2Q6PIF2 218 aa11.19□□□□□ -0.62
CHD8-205ENST00000553651 METTL7BQ6UX53 244 aa11.19□□□□□ -0.62
CHD8-205ENST00000553651 ZNF589Q86UQ0 364 aaPredicted RBP11.19□□□□□ -0.62
CHD8-205ENST00000553651 MIER1Q8N108 512 aa11.19□□□□□ -0.62
CHD8-205ENST00000553651 FAM227BQ96M60 508 aa11.19□□□□□ -0.62
CHD8-205ENST00000553651 INPP4AQ96PE3 977 aaPredicted RBP11.19□□□□□ -0.62
CHD8-205ENST00000553651 SMOC2Q9H3U7 446 aa11.19□□□□□ -0.62
CHD8-205ENST00000553651 TLE6Q9H808 572 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms