RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 NRG1Q02297 640 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-208ENST00000553278 CYB5RLQ6IPT4 315 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 RNF111Q6ZNA4 994 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 ARHGAP36Q6ZRI8 547 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 PODNQ7Z5L7 613 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 TSPYL5Q86VY4 417 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-208ENST00000553278 FAM20CQ8IXL6 584 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 FAM43AQ8N2R8 423 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 JADE3Q92613 823 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 HEXIM2Q96MH2 286 aaKnown RBP7.24□□□□□ -1.25
SCFD1-208ENST00000553278 FAM193BQ96PV7 902 aaPredicted RBP7.24□□□□□ -1.25
SCFD1-208ENST00000553278 JAM3Q9BX67 310 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 FOXP3Q9BZS1 431 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 SLC12A5Q9H2X9 1139 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 CDIP1Q9H305 208 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 PLCB1Q9NQ66 1216 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 KLHL11Q9NVR0 708 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 DNAJC28Q9NX36 388 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 KCNG1Q9UIX4 513 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 FBXL7Q9UJT9 491 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 PNMA2Q9UL42 364 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 MKL2Q9ULH7 1088 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 PTPN22Q9Y2R2 807 aa7.24□□□□□ -1.25
SCFD1-208ENST00000553278 C7orf72A4D263 438 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 FKTNO75072 461 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 AMY2AP04746 511 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 RHCEP18577 417 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 AMY2BP19961 511 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 AK2P54819 239 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 RHDQ02161 417 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 TMEM95Q3KNT9 176 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 CYP27C1Q4G0S4 372 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 ANGEL2Q5VTE6 544 aaKnown RBP7.23□□□□□ -1.25
SCFD1-208ENST00000553278 ANO1Q5XXA6 986 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 ERAP2Q6P179 960 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 OGFOD3Q6PK18 319 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 PTRH1Q86Y79 214 aaKnown RBP7.23□□□□□ -1.25
SCFD1-208ENST00000553278 IFNL2Q8IZJ0 200 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 MYRIPQ8NFW9 859 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 TGFBRAP1Q8WUH2 860 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 WFDC12Q8WWY7 111 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 ORAI2Q96SN7 254 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 DNM3Q9UQ16 869 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 PCDHA11Q9Y5I1 949 aa7.23□□□□□ -1.25
SCFD1-208ENST00000553278 WTIPA6NIX2 430 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-208ENST00000553278 C9orf172C9J069 976 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 DVL2O14641 736 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 TBX3O15119 743 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 NOS3P29474 1203 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 SERPINB3P29508 390 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 IREB2P48200 963 aaKnown RBP7.22□□□□□ -1.25
SCFD1-208ENST00000553278 USP14P54578 494 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 ADKP55263 362 aaKnown RBP7.22□□□□□ -1.25
SCFD1-208ENST00000553278 ZNF267Q14586 743 aaPredicted RBP7.22□□□□□ -1.25
SCFD1-208ENST00000553278 PDCD1Q15116 288 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 C1orf228Q6PIY5 440 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 BEND4Q6ZU67 534 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 CEP68Q76N32 757 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 FAM186BQ8IYM0 893 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 ACRBPQ8NEB7 543 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 VPS37AQ8NEZ2 397 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 TRMT2BQ96GJ1 504 aaKnown RBP7.22□□□□□ -1.25
SCFD1-208ENST00000553278 NACC1Q96RE7 527 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 MAP3K14Q99558 947 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 MYD88Q99836 296 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 MS4A5Q9H3V2 200 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 ZMAT4Q9H898 229 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 BTG4Q9NY30 223 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 TERF2IPQ9NYB0 399 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 GPR45Q9Y5Y3 372 aa7.22□□□□□ -1.25
SCFD1-208ENST00000553278 KCNK3O14649 394 aa7.21□□□□□ -1.26
SCFD1-208ENST00000553278 ZBED1O96006 694 aa7.21□□□□□ -1.26
SCFD1-208ENST00000553278 AGXTP21549 392 aa7.21□□□□□ -1.26
SCFD1-208ENST00000553278 SNRPNP63162 240 aaKnown RBP7.21□□□□□ -1.26
SCFD1-208ENST00000553278 CHAF1AQ13111 956 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-208ENST00000553278 FIGNQ5HY92 759 aa7.21□□□□□ -1.26
SCFD1-208ENST00000553278 ATAT1Q5SQI0 421 aa7.21□□□□□ -1.26
SCFD1-208ENST00000553278 CC2D1AQ6P1N0 951 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-208ENST00000553278 SRLQ86TD4 932 aa7.21□□□□□ -1.26
SCFD1-208ENST00000553278 NOSTRINQ8IVI9 506 aa7.21□□□□□ -1.26
SCFD1-208ENST00000553278 NLGN4XQ8N0W4 816 aa7.21□□□□□ -1.26
SCFD1-208ENST00000553278 PAF1Q8N7H5 531 aa7.21□□□□□ -1.26
SCFD1-208ENST00000553278 PARD3BQ8TEW8 1205 aa7.21□□□□□ -1.26
SCFD1-208ENST00000553278 WHAMMQ8TF30 809 aa7.21□□□□□ -1.26
SCFD1-208ENST00000553278 HPS3Q969F9 1004 aa7.21□□□□□ -1.26
SCFD1-208ENST00000553278 EPB41L1Q9H4G0 881 aa7.21□□□□□ -1.26
SCFD1-208ENST00000553278 USP36Q9P275 1121 aaKnown RBP7.21□□□□□ -1.26
SCFD1-208ENST00000553278 COA3Q9Y2R0 106 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-208ENST00000553278 B3GALT1Q9Y5Z6 326 aa7.21□□□□□ -1.26
SCFD1-208ENST00000553278 SCDO00767 359 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 TPP1O14773 563 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 DGKIO75912 1065 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 MYL3P08590 195 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 SPATA31C1P0DKV0 1188 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 COL6A2P12110 1019 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 ENPP1P22413 925 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 LTKP29376 864 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 TRAPPC10P48553 1259 aa7.2□□□□□ -1.26
SCFD1-208ENST00000553278 IFI16Q16666 785 aaKnown RBP7.2□□□□□ -1.26
SCFD1-208ENST00000553278 HABP4Q5JVS0 413 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms