RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 H0Y858 1186 aa13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 H3BRB1 525 aa13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 RIOK3O14730 519 aaKnown RBP13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 GALR2O43603 387 aaPredicted RBP13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 CTSHP09668 335 aa13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 ATF7P17544 494 aaPredicted RBP13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 EIF2AK2P19525 551 aaKnown RBP13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 NBL1P41271 181 aa13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 SP2Q02086 613 aa13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 GHRHRQ02643 423 aa13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 NAALADL2Q58DX5 795 aa13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 GPATCH4Q5T3I0 446 aaKnown RBP13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 CRIPAKQ8N1N5 446 aa13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 SUSD6Q92537 303 aa13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 SPATA33Q96N06 139 aa13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 CPVLQ9H3G5 476 aa13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 TUT1Q9H6E5 874 aaKnown RBP13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 EHMT1Q9H9B1 1298 aa13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 TLR9Q9NR96 1032 aa13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 DMXL1Q9Y485 3027 aa13.29□□□□□ -0.28
SUPT16H-202ENST00000552829 PLXNA4Q9HCM2 1894 aa13.28□□□□□ -0.28
SUPT16H-202ENST00000552829 ENPP3O14638 875 aa13.28□□□□□ -0.28
SUPT16H-202ENST00000552829 GGPS1O95749 300 aa13.28□□□□□ -0.28
SUPT16H-202ENST00000552829 ITGB1P05556 798 aa13.28□□□□□ -0.28
SUPT16H-202ENST00000552829 VPS53Q5VIR6 699 aa13.28□□□□□ -0.28
SUPT16H-202ENST00000552829 ARHGEF16Q5VV41 709 aa13.28□□□□□ -0.28
SUPT16H-202ENST00000552829 KCNV1Q6PIU1 500 aa13.28□□□□□ -0.28
SUPT16H-202ENST00000552829 MCF2L2Q86YR7 1114 aa13.28□□□□□ -0.28
SUPT16H-202ENST00000552829 GPATCH3Q96I76 525 aa13.28□□□□□ -0.28
SUPT16H-202ENST00000552829 UBA5Q9GZZ9 404 aa13.28□□□□□ -0.28
SUPT16H-202ENST00000552829 TRPC6Q9Y210 931 aa13.28□□□□□ -0.28
SUPT16H-202ENST00000552829 TPRP12270 2363 aaKnown RBP13.28□□□□□ -0.28
SUPT16H-202ENST00000552829 DOCK5Q9H7D0 1870 aa13.27□□□□□ -0.28
SUPT16H-202ENST00000552829 OPLAHO14841 1288 aa13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 DGKIO75912 1065 aa13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 PDGFBP01127 241 aaPredicted RBP13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 CHRNA1P02708 482 aa13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 TGFB3P10600 412 aa13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 HSPD1P10809 573 aaKnown RBP13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 HSD17B4P51659 736 aa13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 BTG3Q14201 252 aaPredicted RBP13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 CDC37Q16543 378 aaPredicted RBP13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 PTPN21Q16825 1174 aa13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 VSIG10LQ86VR7 867 aa13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 PI4K2BQ8TCG2 481 aa13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 ATP8B4Q8TF62 1192 aa13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 PPP2R3CQ969Q6 453 aa13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 RIPOR3Q96MK2 946 aa13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 PDCD2LQ9BRP1 358 aa13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 BCAS3Q9H6U6 928 aa13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 BARX2Q9UMQ3 279 aaPredicted RBP13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 EPG5Q9HCE0 2579 aa13.27□□□□□ -0.29
SUPT16H-202ENST00000552829 LGALS2P05162 132 aa13.26□□□□□ -0.29
SUPT16H-202ENST00000552829 GOLGA8HP0CJ92 632 aa13.26□□□□□ -0.29
SUPT16H-202ENST00000552829 UBA1P22314 1058 aaKnown RBP13.26□□□□□ -0.29
SUPT16H-202ENST00000552829 NRIP1P48552 1158 aa13.26□□□□□ -0.29
SUPT16H-202ENST00000552829 QRICH1Q2TAL8 776 aa13.26□□□□□ -0.29
SUPT16H-202ENST00000552829 STOX1Q6ZVD7 989 aa13.26□□□□□ -0.29
SUPT16H-202ENST00000552829 RPGRIP1Q96KN7 1286 aa13.26□□□□□ -0.29
SUPT16H-202ENST00000552829 DCTPP1Q9H773 170 aa13.26□□□□□ -0.29
SUPT16H-202ENST00000552829 SETD4Q9NVD3 440 aa13.26□□□□□ -0.29
SUPT16H-202ENST00000552829 MRPL11Q9Y3B7 192 aaKnown RBP13.26□□□□□ -0.29
SUPT16H-202ENST00000552829 MRPL42Q9Y6G3 142 aaKnown RBP13.26□□□□□ -0.29
SUPT16H-202ENST00000552829 LOXHD1Q8IVV2 1947 aa13.25□□□□□ -0.29
SUPT16H-202ENST00000552829 TTC41PQ6P2S7 1318 aa13.25□□□□□ -0.29
SUPT16H-202ENST00000552829 SORBS3O60504 671 aa13.25□□□□□ -0.29
SUPT16H-202ENST00000552829 FGAP02671 866 aa13.25□□□□□ -0.29
SUPT16H-202ENST00000552829 ID4P47928 161 aa13.25□□□□□ -0.29
SUPT16H-202ENST00000552829 MGAT3Q09327 533 aa13.25□□□□□ -0.29
SUPT16H-202ENST00000552829 LPIN1Q14693 890 aa13.25□□□□□ -0.29
SUPT16H-202ENST00000552829 RRP12Q5JTH9 1297 aaKnown RBP13.25□□□□□ -0.29
SUPT16H-202ENST00000552829 C20orf194Q5TEA3 1177 aa13.25□□□□□ -0.29
SUPT16H-202ENST00000552829 CMTR2Q8IYT2 770 aaKnown RBP13.25□□□□□ -0.29
SUPT16H-202ENST00000552829 ADGRF4Q8IZF3 695 aa13.25□□□□□ -0.29
SUPT16H-202ENST00000552829 KLHL23Q8NBE8 558 aa13.25□□□□□ -0.29
SUPT16H-202ENST00000552829 VN1R2Q8NFZ6 395 aa13.25□□□□□ -0.29
SUPT16H-202ENST00000552829 IL31RAQ8NI17 732 aa13.25□□□□□ -0.29
SUPT16H-202ENST00000552829 GPKOWQ92917 476 aaPredicted RBP eCLIP13.25□□□□□ -0.29
SUPT16H-202ENST00000552829 CHMP4BQ9H444 224 aaKnown RBP13.25□□□□□ -0.29
SUPT16H-202ENST00000552829 CSPG5O95196 566 aa13.24□□□□□ -0.29
SUPT16H-202ENST00000552829 GHRP10912 638 aa13.24□□□□□ -0.29
SUPT16H-202ENST00000552829 GNAT1P11488 350 aa13.24□□□□□ -0.29
SUPT16H-202ENST00000552829 RTN4RL1Q86UN2 441 aaPredicted RBP13.24□□□□□ -0.29
SUPT16H-202ENST00000552829 EXOC6Q8TAG9 804 aa13.24□□□□□ -0.29
SUPT16H-202ENST00000552829 POF1BQ8WVV4 589 aa13.24□□□□□ -0.29
SUPT16H-202ENST00000552829 LINC01599Q8WXQ3 324 aa13.24□□□□□ -0.29
SUPT16H-202ENST00000552829 USP26Q9BXU7 913 aa13.24□□□□□ -0.29
SUPT16H-202ENST00000552829 S1PR5Q9H228 398 aa13.24□□□□□ -0.29
SUPT16H-202ENST00000552829 JMJD4Q9H9V9 463 aa13.24□□□□□ -0.29
SUPT16H-202ENST00000552829 PCDHGC5Q9Y5F6 944 aa13.24□□□□□ -0.29
SUPT16H-202ENST00000552829 NCOR2Q9Y618 2525 aa13.24□□□□□ -0.29
SUPT16H-202ENST00000552829 KMT2BQ9UMN6 2715 aaPredicted RBP13.23□□□□□ -0.29
SUPT16H-202ENST00000552829 CFBP00751 764 aa13.23□□□□□ -0.29
SUPT16H-202ENST00000552829 MYCLP12524 364 aaPredicted RBP13.23□□□□□ -0.29
SUPT16H-202ENST00000552829 KCNC3Q14003 757 aa13.23□□□□□ -0.29
SUPT16H-202ENST00000552829 PGM5Q15124 567 aa13.23□□□□□ -0.29
SUPT16H-202ENST00000552829 TMEM184AQ6ZMB5 413 aa13.23□□□□□ -0.29
SUPT16H-202ENST00000552829 DGKHQ86XP1 1220 aa13.23□□□□□ -0.29
SUPT16H-202ENST00000552829 TMEM105Q8N8V8 129 aa13.23□□□□□ -0.29
SUPT16H-202ENST00000552829 LMBR1Q8WVP7 490 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms