RNA–Protein interactions for RNA: ENST00000552573.6

TGFBR1-210, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-210ENST00000552573 SSBP3Q9BWW4 388 aaPredicted RBP3.15□□□□□ -1.91
TGFBR1-210ENST00000552573 KRTAP4-2Q9BYR5 136 aa3.15□□□□□ -1.91
TGFBR1-210ENST00000552573 CD244Q9BZW8 370 aa3.15□□□□□ -1.91
TGFBR1-210ENST00000552573 SLC52A2Q9HAB3 445 aa3.15□□□□□ -1.91
TGFBR1-210ENST00000552573 USP40Q9NVE5 1235 aa3.15□□□□□ -1.91
TGFBR1-210ENST00000552573 CBLCQ9ULV8 474 aa3.15□□□□□ -1.91
TGFBR1-210ENST00000552573 PCDHA9Q9Y5H5 950 aa3.15□□□□□ -1.91
TGFBR1-210ENST00000552573 C9orf118A6NHY6 69 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 FAM90A27PA6NNH2 459 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 ZNF839A8K0R7 811 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 ZNF561-AS1K7EIQ3 104 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 KCNQ2O43526 872 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 B4GALT3O60512 393 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 KLHL18O94889 574 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 CRTAMO95727 393 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 IL18BPO95998 194 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 CELA3BP08861 270 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 PYGMP11217 842 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 KCNA6P17658 529 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 GUCY1A3Q02108 690 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 EFEMP1Q12805 493 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 SF3A1Q15459 793 aaKnown RBP3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 GPR19Q15760 415 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 ZC3H12BQ5HYM0 836 aaKnown RBP3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 SOGA3Q5TF21 947 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 CD276Q5ZPR3 534 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 PKN3Q6P5Z2 889 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 ARHGAP36Q6ZRI8 547 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 C16orf59Q7L2K0 433 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 PMFBP1Q8TBY8 1022 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 CLIC6Q96NY7 704 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 SRPK1Q96SB4 655 aaKnown RBP3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 DNAJC2Q99543 621 aaKnown RBP3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 BDH2Q9BUT1 245 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 KRTAP4-11Q9BYQ6 195 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 SMURF1Q9HCE7 757 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 DLL4Q9NR61 685 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 KCND1Q9NSA2 647 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 CROTQ9UKG9 612 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 SRPK3Q9UPE1 567 aa3.14□□□□□ -1.91
TGFBR1-210ENST00000552573 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 RASGRP1O95267 797 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 KNG1P01042 644 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 ITGB3P05106 788 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 PDE6AP16499 860 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 JAM2P57087 298 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 LACTBP83111 547 aaPredicted RBP3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 PFKPQ01813 784 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 SEC23AQ15436 765 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 SKIDA1Q1XH10 827 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 TBC1D10BQ4KMP7 808 aaPredicted RBP3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 C2orf27AQ580R0 203 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 UBXN11Q5T124 520 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 PRAMEF18Q5VWM3 479 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 VASNQ6EMK4 673 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 FSTL4Q6MZW2 842 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 MTDHQ86UE4 582 aaKnown RBP3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 OSTM1Q86WC4 334 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 PTRH1Q86Y79 214 aaKnown RBP3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 NUDT10Q8NFP7 164 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 THAP3Q8WTV1 239 aaPredicted RBP3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 SREK1Q8WXA9 508 aaKnown RBP3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 FBXW5Q969U6 566 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 NUDT11Q96G61 164 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 OSBPL2Q9H1P3 480 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 KANSL2Q9H9L4 492 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 INVSQ9Y283 1065 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 PTCH2Q9Y6C5 1203 aa3.13□□□□□ -1.91
TGFBR1-210ENST00000552573 CCDC66A2RUB6 948 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 PLATP00750 562 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 C4BPAP04003 597 aaKnown RBP3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 ENO2P09104 434 aaPredicted RBP3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 SRGAP2CP0DJJ0 459 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 PTPN1P18031 435 aaKnown RBP3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 PLP2Q04941 152 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 KIAA2012Q0VF49 1180 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 DBPQ10586 325 aaPredicted RBP3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 TM4SF20Q53R12 229 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 FIGNQ5HY92 759 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 BTBD8Q5XKL5 378 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 ABHD17CQ6PCB6 329 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 FGD2Q7Z6J4 655 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 NOSTRINQ8IVI9 506 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 LGI4Q8N135 537 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 ZSWIM2Q8NEG5 633 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 LCORQ96JN0 433 aaPredicted RBP3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 IPO9Q96P70 1041 aaKnown RBP3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 WRNIP1Q96S55 665 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 KRTAP3-1Q9BYR8 98 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 TMEM168Q9H0V1 697 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 L2HGDHQ9H9P8 463 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 TRIM39Q9HCM9 518 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 SLC39A2Q9NP94 309 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 CATSPERZQ9NTU4 200 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 BTBD7Q9P203 1132 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 NDOR1Q9UHB4 597 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 ZFP69BQ9UJL9 534 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 ADAM29Q9UKF5 820 aa3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 CNOT11Q9UKZ1 510 aaKnown RBP3.12□□□□□ -1.91
TGFBR1-210ENST00000552573 CDK11AQ9UQ88 783 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms