RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 DDX41Q9UJV9 622 aaKnown RBP5.91□□□□□ -1.46
USP44-207ENST00000552237 KNG1P01042 644 aa5.9□□□□□ -1.46
USP44-207ENST00000552237 CASP7P55210 303 aa5.9□□□□□ -1.46
USP44-207ENST00000552237 CYP4F3Q08477 520 aa5.9□□□□□ -1.46
USP44-207ENST00000552237 PRSS53Q2L4Q9 553 aa5.9□□□□□ -1.46
USP44-207ENST00000552237 CYP4F22Q6NT55 531 aa5.9□□□□□ -1.46
USP44-207ENST00000552237 GPRASP2Q96D09 838 aa5.9□□□□□ -1.46
USP44-207ENST00000552237 HSPBP1Q9NZL4 362 aa5.9□□□□□ -1.46
USP44-207ENST00000552237 ARHGAP20Q9P2F6 1191 aa5.9□□□□□ -1.46
USP44-207ENST00000552237 H0Y858 1186 aa5.89□□□□□ -1.47
USP44-207ENST00000552237 RAD17O75943 681 aa5.89□□□□□ -1.47
USP44-207ENST00000552237 ITGAVP06756 1048 aa5.89□□□□□ -1.47
USP44-207ENST00000552237 LCP1P13796 627 aa5.89□□□□□ -1.47
USP44-207ENST00000552237 SKIDA1Q1XH10 827 aa5.89□□□□□ -1.47
USP44-207ENST00000552237 POLNQ7Z5Q5 900 aa5.89□□□□□ -1.47
USP44-207ENST00000552237 STPG3Q8N7X2 389 aa5.89□□□□□ -1.47
USP44-207ENST00000552237 TTLL11Q8NHH1 800 aa5.89□□□□□ -1.47
USP44-207ENST00000552237 SLC27A2O14975 620 aa5.88□□□□□ -1.47
USP44-207ENST00000552237 TBX1O43435 398 aa5.88□□□□□ -1.47
USP44-207ENST00000552237 CKMP06732 381 aa5.88□□□□□ -1.47
USP44-207ENST00000552237 C1SP09871 688 aa5.88□□□□□ -1.47
USP44-207ENST00000552237 CR2P20023 1033 aa5.88□□□□□ -1.47
USP44-207ENST00000552237 HDLBPQ00341 1268 aaKnown RBP5.88□□□□□ -1.47
USP44-207ENST00000552237 SV2CQ496J9 727 aa5.88□□□□□ -1.47
USP44-207ENST00000552237 PROSER1Q86XN7 944 aa5.88□□□□□ -1.47
USP44-207ENST00000552237 SHDQ96IW2 340 aa5.88□□□□□ -1.47
USP44-207ENST00000552237 OR14A2Q96R54 314 aa5.88□□□□□ -1.47
USP44-207ENST00000552237 CARD11Q9BXL7 1154 aa5.88□□□□□ -1.47
USP44-207ENST00000552237 OAZ3Q9UMX2 235 aa5.88□□□□□ -1.47
USP44-207ENST00000552237 PTPN22Q9Y2R2 807 aa5.88□□□□□ -1.47
USP44-207ENST00000552237 ARNTLO00327 626 aa5.87□□□□□ -1.47
USP44-207ENST00000552237 CDC14BO60729 498 aa5.87□□□□□ -1.47
USP44-207ENST00000552237 ZNF888P0CJ79 500 aaPredicted RBP5.87□□□□□ -1.47
USP44-207ENST00000552237 NASPP49321 788 aaPredicted RBP5.87□□□□□ -1.47
USP44-207ENST00000552237 TUBA3CQ13748 450 aa5.87□□□□□ -1.47
USP44-207ENST00000552237 TUBA3EQ6PEY2 450 aa5.87□□□□□ -1.47
USP44-207ENST00000552237 METTL16Q86W50 562 aaKnown RBP5.87□□□□□ -1.47
USP44-207ENST00000552237 NT5DC4Q86YG4 428 aa5.87□□□□□ -1.47
USP44-207ENST00000552237 PIP4K2CQ8TBX8 421 aa5.87□□□□□ -1.47
USP44-207ENST00000552237 CCDC140Q96MF4 163 aa5.87□□□□□ -1.47
USP44-207ENST00000552237 KATNBL1Q9H079 304 aa5.87□□□□□ -1.47
USP44-207ENST00000552237 WDR26Q9H7D7 661 aa5.87□□□□□ -1.47
USP44-207ENST00000552237 SLC6A20Q9NP91 592 aa5.87□□□□□ -1.47
USP44-207ENST00000552237 KCND1Q9NSA2 647 aa5.87□□□□□ -1.47
USP44-207ENST00000552237 NUB1Q9Y5A7 615 aa5.87□□□□□ -1.47
USP44-207ENST00000552237 SCG5P05408 212 aa5.86□□□□□ -1.47
USP44-207ENST00000552237 ENO2P09104 434 aaPredicted RBP5.86□□□□□ -1.47
USP44-207ENST00000552237 MAKP20794 623 aa5.86□□□□□ -1.47
USP44-207ENST00000552237 RRADP55042 308 aa5.86□□□□□ -1.47
USP44-207ENST00000552237 TESK1Q15569 626 aa5.86□□□□□ -1.47
USP44-207ENST00000552237 ZNF227Q86WZ6 799 aa5.86□□□□□ -1.47
USP44-207ENST00000552237 KREMEN2Q8NCW0 462 aa5.86□□□□□ -1.47
USP44-207ENST00000552237 C12orf65Q9H3J6 166 aaKnown RBP5.86□□□□□ -1.47
USP44-207ENST00000552237 E9PSI1 815 aa5.85□□□□□ -1.47
USP44-207ENST00000552237 ACRV1P26436 265 aa5.85□□□□□ -1.47
USP44-207ENST00000552237 SF1Q15637 639 aaKnown RBP5.85□□□□□ -1.47
USP44-207ENST00000552237 PAN2Q504Q3 1202 aaKnown RBP5.85□□□□□ -1.47
USP44-207ENST00000552237 ZMAT1Q5H9K5 638 aa5.85□□□□□ -1.47
USP44-207ENST00000552237 MRGPRGQ86SM5 289 aa5.85□□□□□ -1.47
USP44-207ENST00000552237 IL17DQ8TAD2 202 aa5.85□□□□□ -1.47
USP44-207ENST00000552237 RASGRP4Q8TDF6 673 aa5.85□□□□□ -1.47
USP44-207ENST00000552237 ZNF483Q8TF39 744 aaPredicted RBP5.85□□□□□ -1.47
USP44-207ENST00000552237 CACTINQ8WUQ7 758 aaKnown RBP5.85□□□□□ -1.47
USP44-207ENST00000552237 CLEC4DQ8WXI8 215 aa5.85□□□□□ -1.47
USP44-207ENST00000552237 DPYSL5Q9BPU6 564 aa5.85□□□□□ -1.47
USP44-207ENST00000552237 TACO1Q9BSH4 297 aaKnown RBP5.85□□□□□ -1.47
USP44-207ENST00000552237 JAM3Q9BX67 310 aa5.85□□□□□ -1.47
USP44-207ENST00000552237 MMRN2Q9H8L6 949 aa5.85□□□□□ -1.47
USP44-207ENST00000552237 SLC30A1Q9Y6M5 507 aa5.85□□□□□ -1.47
USP44-207ENST00000552237 FAHP16930 419 aa5.84□□□□□ -1.47
USP44-207ENST00000552237 PFKPQ01813 784 aa5.84□□□□□ -1.47
USP44-207ENST00000552237 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
USP44-207ENST00000552237 Q6ZSN1 163 aa5.84□□□□□ -1.47
USP44-207ENST00000552237 TMEM145Q8NBT3 493 aa5.84□□□□□ -1.47
USP44-207ENST00000552237 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.84□□□□□ -1.47
USP44-207ENST00000552237 REXO2Q9Y3B8 237 aaKnown RBP5.84□□□□□ -1.47
USP44-207ENST00000552237 NR2E1Q9Y466 385 aa5.84□□□□□ -1.47
USP44-207ENST00000552237 PLSCR1O15162 318 aa5.83□□□□□ -1.48
USP44-207ENST00000552237 CUTAO60888 179 aa5.83□□□□□ -1.48
USP44-207ENST00000552237 POLD1P28340 1107 aa5.83□□□□□ -1.48
USP44-207ENST00000552237 GFRA1P56159 465 aa5.83□□□□□ -1.48
USP44-207ENST00000552237 TUSC3Q13454 348 aa5.83□□□□□ -1.48
USP44-207ENST00000552237 RNF151Q2KHN1 245 aa5.83□□□□□ -1.48
USP44-207ENST00000552237 CD276Q5ZPR3 534 aa5.83□□□□□ -1.48
USP44-207ENST00000552237 DPY19L2P1Q6NXN4 242 aa5.83□□□□□ -1.48
USP44-207ENST00000552237 LDLRAD3Q86YD5 345 aa5.83□□□□□ -1.48
USP44-207ENST00000552237 RBM12BQ8IXT5 1001 aaKnown RBP5.83□□□□□ -1.48
USP44-207ENST00000552237 FAM169BQ8N8A8 192 aa5.83□□□□□ -1.48
USP44-207ENST00000552237 ANAPC16Q96DE5 110 aa5.83□□□□□ -1.48
USP44-207ENST00000552237 ESYT3A0FGR9 886 aa5.82□□□□□ -1.48
USP44-207ENST00000552237 U2SURPO15042 1029 aaKnown RBP5.82□□□□□ -1.48
USP44-207ENST00000552237 TCF3P15923 654 aa5.82□□□□□ -1.48
USP44-207ENST00000552237 LMO1P25800 156 aa5.82□□□□□ -1.48
USP44-207ENST00000552237 ERCC5P28715 1186 aaPredicted RBP5.82□□□□□ -1.48
USP44-207ENST00000552237 DNAJA1P31689 397 aaKnown RBP5.82□□□□□ -1.48
USP44-207ENST00000552237 HIBADHP31937 336 aaKnown RBP5.82□□□□□ -1.48
USP44-207ENST00000552237 RPS19P39019 145 aaKnown RBP5.82□□□□□ -1.48
USP44-207ENST00000552237 MAMDC4Q6UXC1 1216 aa5.82□□□□□ -1.48
USP44-207ENST00000552237 ZNF808Q8N4W9 903 aaPredicted RBP5.82□□□□□ -1.48
USP44-207ENST00000552237 PLA2G12BQ9BX93 195 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms