RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 TRMT13Q9NUP7 481 aaKnown RBP18.55■□□□□ 0.56
GCN1-209ENST00000551920 MROH7Q68CQ1 1323 aa18.54■□□□□ 0.56
GCN1-209ENST00000551920 TRIM43BA6NCK2 446 aa18.54■□□□□ 0.56
GCN1-209ENST00000551920 CCNT1O60563 726 aaKnown RBP18.54■□□□□ 0.56
GCN1-209ENST00000551920 CLTBP09497 229 aa18.54■□□□□ 0.56
GCN1-209ENST00000551920 GCFC2P16383 781 aaKnown RBP18.54■□□□□ 0.56
GCN1-209ENST00000551920 ITGB8P26012 769 aa18.54■□□□□ 0.56
GCN1-209ENST00000551920 HIC1Q14526 733 aa18.54■□□□□ 0.56
GCN1-209ENST00000551920 NFRKBQ6P4R8 1299 aa18.54■□□□□ 0.56
GCN1-209ENST00000551920 POTEDQ86YR6 584 aa18.54■□□□□ 0.56
GCN1-209ENST00000551920 NOSTRINQ8IVI9 506 aa18.54■□□□□ 0.56
GCN1-209ENST00000551920 SEPT1Q8WYJ6 367 aa18.54■□□□□ 0.56
GCN1-209ENST00000551920 TRIM43Q96BQ3 446 aaPredicted RBP18.54■□□□□ 0.56
GCN1-209ENST00000551920 CTAGE1Q96RT6 745 aa18.54■□□□□ 0.56
GCN1-209ENST00000551920 FOXD4L1Q9NU39 408 aa18.54■□□□□ 0.56
GCN1-209ENST00000551920 TBX21Q9UL17 535 aa18.54■□□□□ 0.56
GCN1-209ENST00000551920 KIF3AQ9Y496 699 aa18.54■□□□□ 0.56
GCN1-209ENST00000551920 NR2E3Q9Y5X4 410 aa18.54■□□□□ 0.56
GCN1-209ENST00000551920 LTBP2Q14767 1821 aa18.53■□□□□ 0.56
GCN1-209ENST00000551920 EMSYQ7Z589 1322 aa18.53■□□□□ 0.56
GCN1-209ENST00000551920 H3BRB1 525 aa18.53■□□□□ 0.56
GCN1-209ENST00000551920 LGR5O75473 907 aa18.53■□□□□ 0.56
GCN1-209ENST00000551920 PSMD10O75832 226 aa18.53■□□□□ 0.56
GCN1-209ENST00000551920 ATG7O95352 703 aa18.53■□□□□ 0.56
GCN1-209ENST00000551920 U2AF2P26368 475 aaKnown RBP eCLIP18.53■□□□□ 0.56
GCN1-209ENST00000551920 FAM47CQ5HY64 1035 aa18.53■□□□□ 0.56
GCN1-209ENST00000551920 SESTD1Q86VW0 696 aa18.53■□□□□ 0.56
GCN1-209ENST00000551920 INTS4Q96HW7 963 aaKnown RBP18.53■□□□□ 0.56
GCN1-209ENST00000551920 KATNAL1Q9BW62 490 aa18.53■□□□□ 0.56
GCN1-209ENST00000551920 TUT1Q9H6E5 874 aaKnown RBP18.53■□□□□ 0.56
GCN1-209ENST00000551920 PRDM5Q9NQX1 630 aaPredicted RBP18.53■□□□□ 0.56
GCN1-209ENST00000551920 TBC1D22BQ9NU19 505 aa18.53■□□□□ 0.56
GCN1-209ENST00000551920 HDAC6Q9UBN7 1215 aa18.53■□□□□ 0.56
GCN1-209ENST00000551920 DCDC2CA8MYV0 355 aa18.52■□□□□ 0.56
GCN1-209ENST00000551920 HOXC8P31273 242 aa18.52■□□□□ 0.56
GCN1-209ENST00000551920 PRPF38BQ5VTL8 546 aaKnown RBP18.52■□□□□ 0.56
GCN1-209ENST00000551920 LRCH2Q5VUJ6 765 aa18.52■□□□□ 0.56
GCN1-209ENST00000551920 GDF6Q6KF10 455 aaPredicted RBP18.52■□□□□ 0.56
GCN1-209ENST00000551920 B3GNT9Q6UX72 402 aa18.52■□□□□ 0.56
GCN1-209ENST00000551920 ABHD15Q6UXT9 468 aa18.52■□□□□ 0.56
GCN1-209ENST00000551920 CCDC60Q8IWA6 550 aaPredicted RBP18.52■□□□□ 0.56
GCN1-209ENST00000551920 HSCBQ8IWL3 235 aa18.52■□□□□ 0.56
GCN1-209ENST00000551920 HAS1Q92839 578 aa18.52■□□□□ 0.56
GCN1-209ENST00000551920 RIT2Q99578 217 aa18.52■□□□□ 0.56
GCN1-209ENST00000551920 UNC45AQ9H3U1 944 aa18.52■□□□□ 0.56
GCN1-209ENST00000551920 GTF2IRD1Q9UHL9 959 aa18.52■□□□□ 0.56
GCN1-209ENST00000551920 IGKV6D-21A0A0A0MT36 114 aa18.51■□□□□ 0.55
GCN1-209ENST00000551920 KIAA0355O15063 1070 aa18.51■□□□□ 0.55
GCN1-209ENST00000551920 GAS7O60861 476 aa18.51■□□□□ 0.55
GCN1-209ENST00000551920 SUPT20HL2P0C7V6 817 aa18.51■□□□□ 0.55
GCN1-209ENST00000551920 MARK3P27448 753 aa18.51■□□□□ 0.55
GCN1-209ENST00000551920 KRT76Q01546 638 aa18.51■□□□□ 0.55
GCN1-209ENST00000551920 NBR1Q14596 966 aa18.51■□□□□ 0.55
GCN1-209ENST00000551920 ZNF746Q6NUN9 644 aaPredicted RBP18.51■□□□□ 0.55
GCN1-209ENST00000551920 SEZ6LQ9BYH1 1024 aa18.51■□□□□ 0.55
GCN1-209ENST00000551920 RNPEPQ9H4A4 650 aa18.51■□□□□ 0.55
GCN1-209ENST00000551920 VAV3Q9UKW4 847 aa18.51■□□□□ 0.55
GCN1-209ENST00000551920 UMODL1Q5DID0 1318 aa18.5■□□□□ 0.55
GCN1-209ENST00000551920 CHMP2AO43633 222 aa18.5■□□□□ 0.55
GCN1-209ENST00000551920 SMIM10L2AP0DMW4 78 aa18.5■□□□□ 0.55
GCN1-209ENST00000551920 SMIM10L2BP0DMW5 78 aa18.5■□□□□ 0.55
GCN1-209ENST00000551920 CYP2C9P11712 490 aa18.5■□□□□ 0.55
GCN1-209ENST00000551920 ATP2B1P20020 1258 aa18.5■□□□□ 0.55
GCN1-209ENST00000551920 TOB1P50616 345 aaPredicted RBP18.5■□□□□ 0.55
GCN1-209ENST00000551920 ZNF200P98182 395 aaPredicted RBP18.5■□□□□ 0.55
GCN1-209ENST00000551920 PTPN11Q06124 597 aaPredicted RBP18.5■□□□□ 0.55
GCN1-209ENST00000551920 LARP1BQ659C4 914 aaKnown RBP18.5■□□□□ 0.55
GCN1-209ENST00000551920 C7orf31Q8N865 590 aa18.5■□□□□ 0.55
GCN1-209ENST00000551920 TEKT3Q9BXF9 490 aa18.5■□□□□ 0.55
GCN1-209ENST00000551920 TMEM39AQ9NV64 488 aa18.5■□□□□ 0.55
GCN1-209ENST00000551920 ZNF215Q9UL58 517 aaPredicted RBP18.5■□□□□ 0.55
GCN1-209ENST00000551920 H3BQV1 296 aa18.49■□□□□ 0.55
GCN1-209ENST00000551920 RBAK-RBAKDNI3L0D1 243 aa18.49■□□□□ 0.55
GCN1-209ENST00000551920 NEMFO60524 1076 aa18.49■□□□□ 0.55
GCN1-209ENST00000551920 MAGEA10P43363 369 aaPredicted RBP18.49■□□□□ 0.55
GCN1-209ENST00000551920 SPIRE1Q08AE8 756 aa18.49■□□□□ 0.55
GCN1-209ENST00000551920 GNL2Q13823 731 aaKnown RBP18.49■□□□□ 0.55
GCN1-209ENST00000551920 MCTP1Q6DN14 999 aa18.49■□□□□ 0.55
GCN1-209ENST00000551920 SMAP1Q8IYB5 467 aaPredicted RBP18.49■□□□□ 0.55
GCN1-209ENST00000551920 DHX38Q92620 1227 aaKnown RBP18.49■□□□□ 0.55
GCN1-209ENST00000551920 GLG1Q92896 1179 aa18.49■□□□□ 0.55
GCN1-209ENST00000551920 WNT8BQ93098 351 aa18.49■□□□□ 0.55
GCN1-209ENST00000551920 NAP1L4Q99733 375 aaKnown RBP18.49■□□□□ 0.55
GCN1-209ENST00000551920 TMEM60Q9H2L4 133 aa18.49■□□□□ 0.55
GCN1-209ENST00000551920 ERAP1Q9NZ08 941 aa18.49■□□□□ 0.55
GCN1-209ENST00000551920 IGSF9BQ9UPX0 1349 aa18.49■□□□□ 0.55
GCN1-209ENST00000551920 WDR64B1ANS9 1081 aa18.48■□□□□ 0.55
GCN1-209ENST00000551920 TBX3O15119 743 aa18.48■□□□□ 0.55
GCN1-209ENST00000551920 TLR3O15455 904 aaKnown RBP18.48■□□□□ 0.55
GCN1-209ENST00000551920 MCM7P33993 719 aa18.48■□□□□ 0.55
GCN1-209ENST00000551920 UGCGQ16739 394 aa18.48■□□□□ 0.55
GCN1-209ENST00000551920 MIS18BP1Q6P0N0 1132 aa18.48■□□□□ 0.55
GCN1-209ENST00000551920 AFAP1L1Q8TED9 768 aa18.48■□□□□ 0.55
GCN1-209ENST00000551920 FAM20AQ96MK3 541 aa18.48■□□□□ 0.55
GCN1-209ENST00000551920 NOC4LQ9BVI4 516 aaKnown RBP18.48■□□□□ 0.55
GCN1-209ENST00000551920 PPP1R12CQ9BZL4 782 aa18.48■□□□□ 0.55
GCN1-209ENST00000551920 SMARCAD1Q9H4L7 1026 aa18.48■□□□□ 0.55
GCN1-209ENST00000551920 EML1O00423 815 aa18.47■□□□□ 0.55
GCN1-209ENST00000551920 BACH1O14867 736 aa18.47■□□□□ 0.55
GCN1-209ENST00000551920 ATP4AP20648 1035 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms