RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 CMA1P23946 247 aa8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 ALDH5A1P51649 535 aaPredicted RBP8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 BAATQ14032 418 aaPredicted RBP8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 CAMK4Q16566 473 aa8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 FSCN1Q16658 493 aaKnown RBP8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 TKFCQ3LXA3 575 aa8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 EARS2Q5JPH6 523 aaKnown RBP8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 GPATCH4Q5T3I0 446 aaKnown RBP8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 NSMFQ6X4W1 530 aa8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 BLIDQ8IZY5 108 aa8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 FMR1NBQ8N0W7 255 aaPredicted RBP8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 PCSK9Q8NBP7 692 aaKnown RBP8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 CCDC12Q8WUD4 166 aaPredicted RBP8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 CHURC1Q8WUH1 139 aa8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 COPS5Q92905 334 aa8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 SCLYQ96I15 445 aa8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 PANK2Q9BZ23 570 aa8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 ZNF576Q9H609 170 aa8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 GPCPD1Q9NPB8 672 aa8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 IL23AQ9NPF7 189 aa8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 SEC63Q9UGP8 760 aaKnown RBP8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 CCPG1Q9ULG6 757 aa8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 CEP131Q9UPN4 1083 aa8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 PCDHB6Q9Y5E3 794 aa8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 LOXHD1Q8IVV2 1947 aa8.39□□□□□ -1.07
SMARCD1-210ENST00000551352 MROH7Q68CQ1 1323 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 A0A1B0GVL5 298 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 ESYT2A0FGR8 921 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 hCG_1984214I3L0E3 225 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 M0R2N6 131 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 ADAMTS3O15072 1205 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 DYNC1LI2O43237 492 aaPredicted RBP8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 ARIH2O95376 493 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 BMP15O95972 392 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 CCDC192P0DO97 292 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 MYOGP15173 224 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 PFKFB1P16118 471 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 ATP2B1P20020 1258 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 TRAPPC10P48553 1259 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 NDUFA8P51970 172 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 NAPAP54920 295 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 CCL23P55773 120 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 PPIGQ13427 754 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 ITGA7Q13683 1181 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 CCDC96Q2M329 555 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 TTC38Q5R3I4 469 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 SYDE2Q5VT97 1194 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 RESP18Q5W5W9 173 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 SHC4Q6S5L8 630 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 SPRED2Q7Z698 418 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 HOMER1Q86YM7 354 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 ZNF713Q8N859 430 aaPredicted RBP8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 KRI1Q8N9T8 703 aaKnown RBP8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 DCAF4Q8WV16 495 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 HERVK_113Q902F9 699 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 TBC1D5Q92609 795 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 TIFAQ96CG3 184 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 CTAGE1Q96RT6 745 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 PIGSQ96S52 555 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 UBA5Q9GZZ9 404 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 ZMYND12Q9H0C1 365 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 NKX2-4Q9H2Z4 354 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 PRDM12Q9H4Q4 367 aa8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 FBXO2Q9UK22 296 aaPredicted RBP8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 CTDP1Q9Y5B0 961 aaPredicted RBP8.38□□□□□ -1.07
SMARCD1-210ENST00000551352 ASB14A6NK59 587 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 WNT7AO00755 349 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 CYP2C9P11712 490 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 EDNRBP24530 442 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 RABGGTBP53611 331 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 TYRO3Q06418 890 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 IKQ13123 557 aaPredicted RBP8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 TCTN1Q2MV58 587 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 DUSP28Q4G0W2 176 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 PPP1R18Q6NYC8 613 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 PIK3AP1Q6ZUJ8 805 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 CKAP2LQ8IYA6 745 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 ADGRF4Q8IZF3 695 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 ZNF579Q8NAF0 562 aaKnown RBP8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 RNF214Q8ND24 703 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 RASGRP4Q8TDF6 673 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 VTI1AQ96AJ9 217 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 MTMR8Q96EF0 704 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 CLIC6Q96NY7 704 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 JMJD4Q9H9V9 463 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 VAT1LQ9HCJ6 419 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 VTA1Q9NP79 307 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 TRMT13Q9NUP7 481 aaKnown RBP8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 COL20A1Q9P218 1284 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 HPSEQ9Y251 543 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 SRPRBQ9Y5M8 271 aaKnown RBP8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 KIAA1671Q9BY89 1806 aa8.37□□□□□ -1.07
SMARCD1-210ENST00000551352 PNMA6FA0A0J9YX94 578 aa8.36□□□□□ -1.07
SMARCD1-210ENST00000551352 CCDC194A0A1B0GVG4 234 aa8.36□□□□□ -1.07
SMARCD1-210ENST00000551352 SMCO2A6NFE2 343 aa8.36□□□□□ -1.07
SMARCD1-210ENST00000551352 EPOPA6NHQ4 379 aa8.36□□□□□ -1.07
SMARCD1-210ENST00000551352 ZNF202O95125 648 aa8.36□□□□□ -1.07
SMARCD1-210ENST00000551352 GNA11P29992 359 aa8.36□□□□□ -1.07
SMARCD1-210ENST00000551352 SYKP43405 635 aa8.36□□□□□ -1.07
SMARCD1-210ENST00000551352 ATP2C1P98194 919 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 398.2 ms