RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 FUT2Q10981 343 aa23.2■■□□□ 1.3
SLC48A1-208ENST00000551301 PPM1EQ8WY54 764 aa23.2■■□□□ 1.3
SLC48A1-208ENST00000551301 SMARCAD1Q9H4L7 1026 aa23.2■■□□□ 1.3
SLC48A1-208ENST00000551301 AZI2Q9H6S1 392 aa23.2■■□□□ 1.3
SLC48A1-208ENST00000551301 JPH1Q9HDC5 661 aaPredicted RBP23.2■■□□□ 1.3
SLC48A1-208ENST00000551301 CDH23Q9H251 3354 aa23.2■■□□□ 1.3
SLC48A1-208ENST00000551301 DOCK5Q9H7D0 1870 aa23.19■■□□□ 1.3
SLC48A1-208ENST00000551301 EPB41L2O43491 1005 aaKnown RBP23.19■■□□□ 1.3
SLC48A1-208ENST00000551301 ATP9AO75110 1047 aa23.19■■□□□ 1.3
SLC48A1-208ENST00000551301 CPA1P15085 419 aa23.19■■□□□ 1.3
SLC48A1-208ENST00000551301 RPS6KB1P23443 525 aa23.19■■□□□ 1.3
SLC48A1-208ENST00000551301 CDC27P30260 824 aa23.19■■□□□ 1.3
SLC48A1-208ENST00000551301 HIC1Q14526 733 aa23.19■■□□□ 1.3
SLC48A1-208ENST00000551301 RSPH3Q86UC2 560 aa23.19■■□□□ 1.3
SLC48A1-208ENST00000551301 WNT8BQ93098 351 aa23.19■■□□□ 1.3
SLC48A1-208ENST00000551301 MXRA8Q9BRK3 442 aa23.19■■□□□ 1.3
SLC48A1-208ENST00000551301 ANO3Q9BYT9 981 aa23.19■■□□□ 1.3
SLC48A1-208ENST00000551301 TSPYL2Q9H2G4 693 aaPredicted RBP23.19■■□□□ 1.3
SLC48A1-208ENST00000551301 KAT6AQ92794 2004 aa23.19■■□□□ 1.3
SLC48A1-208ENST00000551301 GTPBP6O43824 516 aaPredicted RBP23.18■■□□□ 1.3
SLC48A1-208ENST00000551301 SCG2P13521 617 aa23.18■■□□□ 1.3
SLC48A1-208ENST00000551301 ADD1P35611 737 aaKnown RBP23.18■■□□□ 1.3
SLC48A1-208ENST00000551301 GPNMBQ14956 572 aa23.18■■□□□ 1.3
SLC48A1-208ENST00000551301 PFKFB3Q16875 520 aaPredicted RBP23.18■■□□□ 1.3
SLC48A1-208ENST00000551301 CEP55Q53EZ4 464 aa23.18■■□□□ 1.3
SLC48A1-208ENST00000551301 FBXL16Q8N461 479 aa23.18■■□□□ 1.3
SLC48A1-208ENST00000551301 SEPT8Q92599 483 aa23.18■■□□□ 1.3
SLC48A1-208ENST00000551301 C6orf50Q9HD87 102 aa23.18■■□□□ 1.3
SLC48A1-208ENST00000551301 KCNH7Q9NS40 1196 aa23.18■■□□□ 1.3
SLC48A1-208ENST00000551301 FAM217BQ9NTX9 383 aaPredicted RBP23.18■■□□□ 1.3
SLC48A1-208ENST00000551301 SLC9A2Q9UBY0 812 aa23.18■■□□□ 1.3
SLC48A1-208ENST00000551301 AMHP03971 560 aa23.17■■□□□ 1.3
SLC48A1-208ENST00000551301 PPFIA1Q13136 1202 aa23.17■■□□□ 1.3
SLC48A1-208ENST00000551301 TYW1BQ6NUM6 668 aa23.17■■□□□ 1.3
SLC48A1-208ENST00000551301 TAF2Q6P1X5 1199 aa23.17■■□□□ 1.3
SLC48A1-208ENST00000551301 TRAF7Q6Q0C0 670 aa23.17■■□□□ 1.3
SLC48A1-208ENST00000551301 LMBR1Q8WVP7 490 aa23.17■■□□□ 1.3
SLC48A1-208ENST00000551301 SYMPKQ92797 1274 aaKnown RBP23.17■■□□□ 1.3
SLC48A1-208ENST00000551301 UNC80Q8N2C7 3258 aa23.16■■□□□ 1.3
SLC48A1-208ENST00000551301 GSTTP1A0A1W2PQM5 241 aa23.16■■□□□ 1.3
SLC48A1-208ENST00000551301 RPLP2P05387 115 aaKnown RBP23.16■■□□□ 1.3
SLC48A1-208ENST00000551301 CTSHP09668 335 aa23.16■■□□□ 1.3
SLC48A1-208ENST00000551301 GNA11P29992 359 aa23.16■■□□□ 1.3
SLC48A1-208ENST00000551301 RAD9AQ99638 391 aa23.16■■□□□ 1.3
SLC48A1-208ENST00000551301 NFASCO94856 1347 aa23.15■■□□□ 1.3
SLC48A1-208ENST00000551301 SREBF1P36956 1147 aa23.15■■□□□ 1.3
SLC48A1-208ENST00000551301 ADGRE1Q14246 886 aa23.15■■□□□ 1.3
SLC48A1-208ENST00000551301 MBTPS1Q14703 1052 aa23.15■■□□□ 1.3
SLC48A1-208ENST00000551301 CCDC85BQ15834 202 aaPredicted RBP23.15■■□□□ 1.3
SLC48A1-208ENST00000551301 DBF4BQ8NFT6 615 aa23.15■■□□□ 1.3
SLC48A1-208ENST00000551301 BICD2Q8TD16 824 aa23.15■■□□□ 1.3
SLC48A1-208ENST00000551301 ARNTL2Q8WYA1 636 aa23.15■■□□□ 1.3
SLC48A1-208ENST00000551301 PGBD1Q96JS3 809 aa23.15■■□□□ 1.3
SLC48A1-208ENST00000551301 ESYT2A0FGR8 921 aa23.14■■□□□ 1.29
SLC48A1-208ENST00000551301 RRN3P2A6NIE6 340 aa23.14■■□□□ 1.29
SLC48A1-208ENST00000551301 PRPF3O43395 683 aaKnown RBP23.14■■□□□ 1.29
SLC48A1-208ENST00000551301 GJB5O95377 273 aa23.14■■□□□ 1.29
SLC48A1-208ENST00000551301 MARK3P27448 753 aa23.14■■□□□ 1.29
SLC48A1-208ENST00000551301 DEFB103AP81534 67 aa23.14■■□□□ 1.29
SLC48A1-208ENST00000551301 TAP1Q03518 808 aa23.14■■□□□ 1.29
SLC48A1-208ENST00000551301 PLEKHG4Q58EX7 1191 aa23.14■■□□□ 1.29
SLC48A1-208ENST00000551301 NIPA1Q7RTP0 329 aa23.14■■□□□ 1.29
SLC48A1-208ENST00000551301 REXO1Q8N1G1 1221 aaKnown RBP23.14■■□□□ 1.29
SLC48A1-208ENST00000551301 CCDC148Q8NFR7 591 aa23.14■■□□□ 1.29
SLC48A1-208ENST00000551301 CERS4Q9HA82 394 aa23.14■■□□□ 1.29
SLC48A1-208ENST00000551301 TMEM260Q9NX78 707 aa23.14■■□□□ 1.29
SLC48A1-208ENST00000551301 TUBE1Q9UJT0 475 aa23.14■■□□□ 1.29
SLC48A1-208ENST00000551301 TELO2Q9Y4R8 837 aa23.14■■□□□ 1.29
SLC48A1-208ENST00000551301 CYP46A1Q9Y6A2 500 aa23.14■■□□□ 1.29
SLC48A1-208ENST00000551301 NID2Q14112 1375 aa23.14■■□□□ 1.29
SLC48A1-208ENST00000551301 MEIS1O00470 390 aa23.13■■□□□ 1.29
SLC48A1-208ENST00000551301 GRIK4Q16099 956 aa23.13■■□□□ 1.29
SLC48A1-208ENST00000551301 JAKMIP3Q5VZ66 844 aa23.13■■□□□ 1.29
SLC48A1-208ENST00000551301 RUFY3Q7L099 469 aa23.13■■□□□ 1.29
SLC48A1-208ENST00000551301 MICALL1Q8N3F8 863 aa23.13■■□□□ 1.29
SLC48A1-208ENST00000551301 USP38Q8NB14 1042 aa23.13■■□□□ 1.29
SLC48A1-208ENST00000551301 APBB2Q92870 758 aa23.13■■□□□ 1.29
SLC48A1-208ENST00000551301 COL25A1Q9BXS0 654 aaPredicted RBP23.13■■□□□ 1.29
SLC48A1-208ENST00000551301 AGXT2Q9BYV1 514 aa23.13■■□□□ 1.29
SLC48A1-208ENST00000551301 ZMYND12Q9H0C1 365 aa23.13■■□□□ 1.29
SLC48A1-208ENST00000551301 AGO4Q9HCK5 861 aaKnown RBP23.13■■□□□ 1.29
SLC48A1-208ENST00000551301 TCEAL9Q9UHQ7 104 aa23.13■■□□□ 1.29
SLC48A1-208ENST00000551301 TRPC6Q9Y210 931 aa23.13■■□□□ 1.29
SLC48A1-208ENST00000551301 INSL6Q9Y581 213 aa23.13■■□□□ 1.29
SLC48A1-208ENST00000551301 CLK2P49760 499 aaKnown RBP23.12■■□□□ 1.29
SLC48A1-208ENST00000551301 ACTR2P61160 394 aa23.12■■□□□ 1.29
SLC48A1-208ENST00000551301 ADAM17P78536 824 aa23.12■■□□□ 1.29
SLC48A1-208ENST00000551301 TRIM22Q8IYM9 498 aa23.12■■□□□ 1.29
SLC48A1-208ENST00000551301 MYOCDQ8IZQ8 938 aa23.12■■□□□ 1.29
SLC48A1-208ENST00000551301 IL27Q8NEV9 243 aa23.12■■□□□ 1.29
SLC48A1-208ENST00000551301 CYP2W1Q8TAV3 490 aa23.12■■□□□ 1.29
SLC48A1-208ENST00000551301 RNF26Q9BY78 433 aaPredicted RBP23.12■■□□□ 1.29
SLC48A1-208ENST00000551301 THEGQ9P2T0 379 aa23.12■■□□□ 1.29
SLC48A1-208ENST00000551301 ARP10275 920 aa23.11■■□□□ 1.29
SLC48A1-208ENST00000551301 SLC26A2P50443 739 aa23.11■■□□□ 1.29
SLC48A1-208ENST00000551301 STAT5BP51692 787 aa23.11■■□□□ 1.29
SLC48A1-208ENST00000551301 TJAP1Q5JTD0 557 aa23.11■■□□□ 1.29
SLC48A1-208ENST00000551301 FAM26DQ5JW98 314 aa23.11■■□□□ 1.29
SLC48A1-208ENST00000551301 FAM117BQ6P1L5 589 aa23.11■■□□□ 1.29
SLC48A1-208ENST00000551301 PLPPR4Q7Z2D5 763 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms