RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 IL2RBP14784 551 aa6.69□□□□□ -1.34
SCAF11-214ENST00000550893 PNLIPP16233 465 aa6.69□□□□□ -1.34
SCAF11-214ENST00000550893 SDHBP21912 280 aa6.69□□□□□ -1.34
SCAF11-214ENST00000550893 NOP2P46087 812 aaKnown RBP6.69□□□□□ -1.34
SCAF11-214ENST00000550893 EVA1CP58658 441 aa6.69□□□□□ -1.34
SCAF11-214ENST00000550893 ATG14Q6ZNE5 492 aa6.69□□□□□ -1.34
SCAF11-214ENST00000550893 ADAT2Q7Z6V5 191 aaKnown RBP6.69□□□□□ -1.34
SCAF11-214ENST00000550893 NAT16Q8N8M0 369 aa6.69□□□□□ -1.34
SCAF11-214ENST00000550893 JMJD8Q96S16 334 aa6.69□□□□□ -1.34
SCAF11-214ENST00000550893 PANK3Q9H999 370 aa6.69□□□□□ -1.34
SCAF11-214ENST00000550893 CAPN10Q9HC96 672 aa6.69□□□□□ -1.34
SCAF11-214ENST00000550893 DIS3Q9Y2L1 958 aaKnown RBP6.69□□□□□ -1.34
SCAF11-214ENST00000550893 TAF6LQ9Y6J9 622 aa6.69□□□□□ -1.34
SCAF11-214ENST00000550893 KCPQ6ZWJ8 1503 aa6.69□□□□□ -1.34
SCAF11-214ENST00000550893 NPC1L1Q9UHC9 1359 aa6.69□□□□□ -1.34
SCAF11-214ENST00000550893 PLSCR1O15162 318 aa6.68□□□□□ -1.34
SCAF11-214ENST00000550893 FGF10O15520 208 aaPredicted RBP6.68□□□□□ -1.34
SCAF11-214ENST00000550893 PEX10O60683 326 aa6.68□□□□□ -1.34
SCAF11-214ENST00000550893 CD3EP07766 207 aa6.68□□□□□ -1.34
SCAF11-214ENST00000550893 MED14OSP0DP75 135 aa6.68□□□□□ -1.34
SCAF11-214ENST00000550893 IFNGR1P15260 489 aa6.68□□□□□ -1.34
SCAF11-214ENST00000550893 PRKCAP17252 672 aa6.68□□□□□ -1.34
SCAF11-214ENST00000550893 GLDCP23378 1020 aa6.68□□□□□ -1.34
SCAF11-214ENST00000550893 RBM25P49756 843 aaKnown RBP6.68□□□□□ -1.34
SCAF11-214ENST00000550893 POU4F1Q01851 419 aa6.68□□□□□ -1.34
SCAF11-214ENST00000550893 EIF4A2Q14240 407 aaKnown RBP6.68□□□□□ -1.34
SCAF11-214ENST00000550893 R3HDM1Q15032 1099 aaKnown RBP6.68□□□□□ -1.34
SCAF11-214ENST00000550893 KIAA1211LQ6NV74 962 aa6.68□□□□□ -1.34
SCAF11-214ENST00000550893 LTV1Q96GA3 475 aaPredicted RBP6.68□□□□□ -1.34
SCAF11-214ENST00000550893 GBP3Q9H0R5 595 aa6.68□□□□□ -1.34
SCAF11-214ENST00000550893 SUSD2Q9UGT4 822 aa6.68□□□□□ -1.34
SCAF11-214ENST00000550893 MRVI1Q9Y6F6 885 aa6.68□□□□□ -1.34
SCAF11-214ENST00000550893 PLEKHG2Q9H7P9 1386 aa6.68□□□□□ -1.34
SCAF11-214ENST00000550893 PPM1BO75688 479 aa6.67□□□□□ -1.34
SCAF11-214ENST00000550893 CFPP27918 469 aa6.67□□□□□ -1.34
SCAF11-214ENST00000550893 VHLLQ6RSH7 139 aa6.67□□□□□ -1.34
SCAF11-214ENST00000550893 VPS37DQ86XT2 251 aa6.67□□□□□ -1.34
SCAF11-214ENST00000550893 NUP43Q8NFH3 380 aa6.67□□□□□ -1.34
SCAF11-214ENST00000550893 MCMBPQ9BTE3 642 aa6.67□□□□□ -1.34
SCAF11-214ENST00000550893 CD320Q9NPF0 282 aa6.67□□□□□ -1.34
SCAF11-214ENST00000550893 IMPACTQ9P2X3 320 aa6.67□□□□□ -1.34
SCAF11-214ENST00000550893 ACSL6Q9UKU0 697 aa6.67□□□□□ -1.34
SCAF11-214ENST00000550893 CGNL1Q0VF96 1302 aa6.67□□□□□ -1.34
SCAF11-214ENST00000550893 KDM3BQ7LBC6 1761 aa6.67□□□□□ -1.34
SCAF11-214ENST00000550893 SCN7AQ01118 1682 aa6.66□□□□□ -1.34
SCAF11-214ENST00000550893 TCAF2A6NFQ2 919 aa6.66□□□□□ -1.34
SCAF11-214ENST00000550893 NPIPB6E9PJ23 425 aa6.66□□□□□ -1.34
SCAF11-214ENST00000550893 VAMP4O75379 141 aa6.66□□□□□ -1.34
SCAF11-214ENST00000550893 ERVFRD-1P60508 538 aa6.66□□□□□ -1.34
SCAF11-214ENST00000550893 CYP4F8P98187 520 aa6.66□□□□□ -1.34
SCAF11-214ENST00000550893 TXNRD1Q16881 649 aa6.66□□□□□ -1.34
SCAF11-214ENST00000550893 HLA-DQA1Q5Y7H0 255 aa6.66□□□□□ -1.34
SCAF11-214ENST00000550893 SGPP1Q9BX95 441 aa6.66□□□□□ -1.34
SCAF11-214ENST00000550893 KRTAP4-2Q9BYR5 136 aa6.66□□□□□ -1.34
SCAF11-214ENST00000550893 CGGBP1Q9UFW8 167 aaPredicted RBP6.66□□□□□ -1.34
SCAF11-214ENST00000550893 SMG5Q9UPR3 1016 aaKnown RBP6.66□□□□□ -1.34
SCAF11-214ENST00000550893 BCORQ6W2J9 1755 aa6.66□□□□□ -1.34
SCAF11-214ENST00000550893 NRXN2Q9P2S2 1712 aa6.65□□□□□ -1.34
SCAF11-214ENST00000550893 AFDNP55196 1824 aaKnown RBP6.65□□□□□ -1.34
SCAF11-214ENST00000550893 TEX51A0A1B0GUA7 166 aa6.65□□□□□ -1.34
SCAF11-214ENST00000550893 SMAD7O15105 426 aaKnown RBP6.65□□□□□ -1.34
SCAF11-214ENST00000550893 SEMA7AO75326 666 aa6.65□□□□□ -1.34
SCAF11-214ENST00000550893 SSBP05455 408 aaKnown RBP eCLIP6.65□□□□□ -1.34
SCAF11-214ENST00000550893 ARL4AP40617 200 aa6.65□□□□□ -1.34
SCAF11-214ENST00000550893 AMPHP49418 695 aa6.65□□□□□ -1.34
SCAF11-214ENST00000550893 DLG4P78352 724 aa6.65□□□□□ -1.34
SCAF11-214ENST00000550893 MVKQ03426 396 aa6.65□□□□□ -1.34
SCAF11-214ENST00000550893 LAPTM5Q13571 262 aa6.65□□□□□ -1.34
SCAF11-214ENST00000550893 KCNA10Q16322 511 aa6.65□□□□□ -1.34
SCAF11-214ENST00000550893 DPY19L1Q2PZI1 675 aa6.65□□□□□ -1.34
SCAF11-214ENST00000550893 CYP2R1Q6VVX0 501 aa6.65□□□□□ -1.34
SCAF11-214ENST00000550893 JAMLQ86YT9 394 aa6.65□□□□□ -1.34
SCAF11-214ENST00000550893 ARHGEF39Q8N4T4 335 aa6.65□□□□□ -1.34
SCAF11-214ENST00000550893 ZNF513Q8N8E2 541 aaPredicted RBP6.65□□□□□ -1.34
SCAF11-214ENST00000550893 TOX2Q96NM4 488 aa6.65□□□□□ -1.34
SCAF11-214ENST00000550893 PTCHD1Q96NR3 888 aa6.65□□□□□ -1.34
SCAF11-214ENST00000550893 GCM1Q9NP62 436 aa6.65□□□□□ -1.34
SCAF11-214ENST00000550893 SUGT1Q9Y2Z0 365 aa6.65□□□□□ -1.34
SCAF11-214ENST00000550893 LAMB4A4D0S4 1761 aa6.64□□□□□ -1.35
SCAF11-214ENST00000550893 ANKRD34BA5PLL1 514 aa6.64□□□□□ -1.35
SCAF11-214ENST00000550893 STXBP3O00186 592 aa6.64□□□□□ -1.35
SCAF11-214ENST00000550893 HRKO00198 91 aa6.64□□□□□ -1.35
SCAF11-214ENST00000550893 EXOC5O00471 708 aa6.64□□□□□ -1.35
SCAF11-214ENST00000550893 MSL3P1P0C860 447 aa6.64□□□□□ -1.35
SCAF11-214ENST00000550893 IL13P35225 146 aa6.64□□□□□ -1.35
SCAF11-214ENST00000550893 YBX1P67809 324 aaKnown RBP6.64□□□□□ -1.35
SCAF11-214ENST00000550893 SRSF3P84103 164 aaKnown RBP6.64□□□□□ -1.35
SCAF11-214ENST00000550893 GNL2Q13823 731 aaKnown RBP6.64□□□□□ -1.35
SCAF11-214ENST00000550893 C1QL4Q86Z23 238 aa6.64□□□□□ -1.35
SCAF11-214ENST00000550893 LRRC56Q8IYG6 542 aaPredicted RBP6.64□□□□□ -1.35
SCAF11-214ENST00000550893 RCC1LQ96I51 464 aaKnown RBP6.64□□□□□ -1.35
SCAF11-214ENST00000550893 TINF2Q9BSI4 451 aa6.64□□□□□ -1.35
SCAF11-214ENST00000550893 KLHL14Q9P2G3 628 aa6.64□□□□□ -1.35
SCAF11-214ENST00000550893 APEX2Q9UBZ4 518 aa6.64□□□□□ -1.35
SCAF11-214ENST00000550893 PNPLA7Q6ZV29 1317 aa6.64□□□□□ -1.35
SCAF11-214ENST00000550893 DLEC1Q9Y238 1755 aa6.64□□□□□ -1.35
SCAF11-214ENST00000550893 ANKRD31Q8N7Z5 1873 aa6.64□□□□□ -1.35
SCAF11-214ENST00000550893 CHD4Q14839 1912 aa6.64□□□□□ -1.35
SCAF11-214ENST00000550893 A0A1W2PQ27 194 aa6.63□□□□□ -1.35
SCAF11-214ENST00000550893 A0A1W2PQ64 194 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms