RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 BANK1Q8NDB2 785 aa23.26■■□□□ 1.31
PRDM4-205ENST00000550376 SYTL5Q8TDW5 730 aaPredicted RBP23.26■■□□□ 1.31
PRDM4-205ENST00000550376 NOC3LQ8WTT2 800 aaKnown RBP23.26■■□□□ 1.31
PRDM4-205ENST00000550376 LZTFL1Q9NQ48 299 aa23.26■■□□□ 1.31
PRDM4-205ENST00000550376 VWA5AO00534 786 aa23.25■■□□□ 1.31
PRDM4-205ENST00000550376 ABL1P00519 1130 aa23.25■■□□□ 1.31
PRDM4-205ENST00000550376 MYCLP12524 364 aaPredicted RBP23.25■■□□□ 1.31
PRDM4-205ENST00000550376 PSMD2Q13200 908 aa23.25■■□□□ 1.31
PRDM4-205ENST00000550376 COBLL1Q53SF7 1204 aa23.25■■□□□ 1.31
PRDM4-205ENST00000550376 LRRC55Q6ZSA7 311 aa23.25■■□□□ 1.31
PRDM4-205ENST00000550376 ACRBPQ8NEB7 543 aa23.25■■□□□ 1.31
PRDM4-205ENST00000550376 KIF18AQ8NI77 898 aa23.25■■□□□ 1.31
PRDM4-205ENST00000550376 TRERF1Q96PN7 1200 aa23.25■■□□□ 1.31
PRDM4-205ENST00000550376 SH2D3AQ9BRG2 576 aa23.25■■□□□ 1.31
PRDM4-205ENST00000550376 KCNH7Q9NS40 1196 aa23.25■■□□□ 1.31
PRDM4-205ENST00000550376 RABGAP1Q9Y3P9 1069 aa23.25■■□□□ 1.31
PRDM4-205ENST00000550376 PAXBP1Q9Y5B6 917 aa23.25■■□□□ 1.31
PRDM4-205ENST00000550376 PCNTO95613 3336 aa23.25■■□□□ 1.31
PRDM4-205ENST00000550376 TPM1P09493 284 aa23.25■■□□□ 1.31
PRDM4-205ENST00000550376 MRPS9P82933 396 aaKnown RBP23.25■■□□□ 1.31
PRDM4-205ENST00000550376 GPC2Q8N158 579 aa23.25■■□□□ 1.31
PRDM4-205ENST00000550376 CNKSR2Q8WXI2 1034 aa23.25■■□□□ 1.31
PRDM4-205ENST00000550376 KLRG1Q96E93 195 aa23.25■■□□□ 1.31
PRDM4-205ENST00000550376 MXRA8Q9BRK3 442 aa23.25■■□□□ 1.31
PRDM4-205ENST00000550376 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.25■■□□□ 1.31
PRDM4-205ENST00000550376 V9GYY5 206 aaPredicted RBP23.25■■□□□ 1.31
PRDM4-205ENST00000550376 DNM2P50570 870 aa23.24■■□□□ 1.31
PRDM4-205ENST00000550376 KCNA1Q09470 495 aa23.24■■□□□ 1.31
PRDM4-205ENST00000550376 ZNF112Q9UJU3 913 aa23.24■■□□□ 1.31
PRDM4-205ENST00000550376 APOBEC3FQ8IUX4 373 aaKnown RBP23.24■■□□□ 1.31
PRDM4-205ENST00000550376 PRPF6O94906 941 aaKnown RBP23.23■■□□□ 1.31
PRDM4-205ENST00000550376 MYBP10242 640 aa23.23■■□□□ 1.31
PRDM4-205ENST00000550376 POLR3CQ9BUI4 534 aaPredicted RBP23.23■■□□□ 1.31
PRDM4-205ENST00000550376 POLR2AP24928 1970 aaKnown RBP23.23■■□□□ 1.31
PRDM4-205ENST00000550376 ZSCAN12O43309 604 aa23.23■■□□□ 1.31
PRDM4-205ENST00000550376 ZBED4O75132 1171 aa23.23■■□□□ 1.31
PRDM4-205ENST00000550376 TRIM21P19474 475 aaKnown RBP23.23■■□□□ 1.31
PRDM4-205ENST00000550376 PPP1R2P41236 205 aa23.23■■□□□ 1.31
PRDM4-205ENST00000550376 FAM114A1Q8IWE2 563 aa23.23■■□□□ 1.31
PRDM4-205ENST00000550376 WDR24Q96S15 920 aa23.23■■□□□ 1.31
PRDM4-205ENST00000550376 EHMT1Q9H9B1 1298 aa23.23■■□□□ 1.31
PRDM4-205ENST00000550376 DYNC1I1O14576 645 aa23.22■■□□□ 1.31
PRDM4-205ENST00000550376 EPHB6O15197 1021 aa23.22■■□□□ 1.31
PRDM4-205ENST00000550376 ETF1P62495 437 aaKnown RBP23.22■■□□□ 1.31
PRDM4-205ENST00000550376 PPP2R5CQ13362 524 aa23.22■■□□□ 1.31
PRDM4-205ENST00000550376 RINT1Q6NUQ1 792 aa23.22■■□□□ 1.31
PRDM4-205ENST00000550376 MAEAQ7L5Y9 396 aa23.22■■□□□ 1.31
PRDM4-205ENST00000550376 KSR1Q8IVT5 923 aa23.22■■□□□ 1.31
PRDM4-205ENST00000550376 ADGRG1Q9Y653 693 aa23.22■■□□□ 1.31
PRDM4-205ENST00000550376 ZCWPW2Q504Y3 356 aa23.22■■□□□ 1.31
PRDM4-205ENST00000550376 NDST4Q9H3R1 872 aa23.22■■□□□ 1.31
PRDM4-205ENST00000550376 FAM207AQ9NSI2 230 aaPredicted RBP23.22■■□□□ 1.31
PRDM4-205ENST00000550376 LUC7L2Q9Y383 392 aaKnown RBP23.22■■□□□ 1.31
PRDM4-205ENST00000550376 HOXD13P35453 343 aa23.21■■□□□ 1.31
PRDM4-205ENST00000550376 USP14P54578 494 aa23.21■■□□□ 1.31
PRDM4-205ENST00000550376 LRRC63Q05C16 580 aa23.21■■□□□ 1.31
PRDM4-205ENST00000550376 ITGB3BPQ13352 177 aaPredicted RBP23.21■■□□□ 1.31
PRDM4-205ENST00000550376 BAATQ14032 418 aaPredicted RBP23.21■■□□□ 1.31
PRDM4-205ENST00000550376 VWA3BQ502W6 1294 aa23.21■■□□□ 1.31
PRDM4-205ENST00000550376 LRRN4CLQ8ND94 238 aa23.21■■□□□ 1.31
PRDM4-205ENST00000550376 TSG101Q99816 390 aa23.21■■□□□ 1.31
PRDM4-205ENST00000550376 TFR2Q9UP52 801 aa23.21■■□□□ 1.31
PRDM4-205ENST00000550376 ADM5C9JUS6 153 aa23.21■■□□□ 1.31
PRDM4-205ENST00000550376 EYA4O95677 639 aa23.21■■□□□ 1.31
PRDM4-205ENST00000550376 GTF2F1P35269 517 aaKnown RBP eCLIP23.21■■□□□ 1.31
PRDM4-205ENST00000550376 SMCR8Q8TEV9 937 aaPredicted RBP23.21■■□□□ 1.31
PRDM4-205ENST00000550376 RMDN3Q96TC7 470 aa23.21■■□□□ 1.31
PRDM4-205ENST00000550376 KCTD10Q9H3F6 313 aa23.21■■□□□ 1.31
PRDM4-205ENST00000550376 SPON1Q9HCB6 807 aa23.21■■□□□ 1.31
PRDM4-205ENST00000550376 RNF181Q9P0P0 153 aa23.21■■□□□ 1.31
PRDM4-205ENST00000550376 A0A1W2PQC6 194 aa23.2■■□□□ 1.3
PRDM4-205ENST00000550376 FRMD3A2A2Y4 597 aa23.2■■□□□ 1.3
PRDM4-205ENST00000550376 ATP9AO75110 1047 aa23.2■■□□□ 1.3
PRDM4-205ENST00000550376 GNG11P61952 73 aa23.2■■□□□ 1.3
PRDM4-205ENST00000550376 PLS1Q14651 629 aa23.2■■□□□ 1.3
PRDM4-205ENST00000550376 TKFCQ3LXA3 575 aa23.2■■□□□ 1.3
PRDM4-205ENST00000550376 SNRNP48Q6IEG0 339 aaKnown RBP23.2■■□□□ 1.3
PRDM4-205ENST00000550376 RNF207Q6ZRF8 634 aa23.2■■□□□ 1.3
PRDM4-205ENST00000550376 MCF2L2Q86YR7 1114 aa23.2■■□□□ 1.3
PRDM4-205ENST00000550376 GTPBP4Q9BZE4 634 aaKnown RBP23.2■■□□□ 1.3
PRDM4-205ENST00000550376 SAMM50Q9Y512 469 aa23.2■■□□□ 1.3
PRDM4-205ENST00000550376 TMEM150BA6NC51 233 aa23.2■■□□□ 1.3
PRDM4-205ENST00000550376 APBA1Q02410 837 aa23.2■■□□□ 1.3
PRDM4-205ENST00000550376 LXNQ9BS40 222 aa23.2■■□□□ 1.3
PRDM4-205ENST00000550376 TEKT3Q9BXF9 490 aa23.2■■□□□ 1.3
PRDM4-205ENST00000550376 RNF146Q9NTX7 359 aa23.2■■□□□ 1.3
PRDM4-205ENST00000550376 ZNF215Q9UL58 517 aaPredicted RBP23.2■■□□□ 1.3
PRDM4-205ENST00000550376 SSC5DA1L4H1 1573 aa23.2■■□□□ 1.3
PRDM4-205ENST00000550376 SORBS3O60504 671 aa23.19■■□□□ 1.3
PRDM4-205ENST00000550376 CCDC175P0C221 793 aa23.19■■□□□ 1.3
PRDM4-205ENST00000550376 FKBP3Q00688 224 aaKnown RBP23.19■■□□□ 1.3
PRDM4-205ENST00000550376 WDR59Q6PJI9 974 aa23.19■■□□□ 1.3
PRDM4-205ENST00000550376 ZNF710Q8N1W2 664 aa23.19■■□□□ 1.3
PRDM4-205ENST00000550376 MMRN2Q9H8L6 949 aa23.19■■□□□ 1.3
PRDM4-205ENST00000550376 USP2O75604 605 aaPredicted RBP23.19■■□□□ 1.3
PRDM4-205ENST00000550376 NMT1P30419 496 aaKnown RBP23.19■■□□□ 1.3
PRDM4-205ENST00000550376 CCDC40Q4G0X9 1142 aa23.19■■□□□ 1.3
PRDM4-205ENST00000550376 ZC2HC1CQ53FD0 456 aaPredicted RBP23.19■■□□□ 1.3
PRDM4-205ENST00000550376 OR8K1Q8NGG5 319 aa23.19■■□□□ 1.3
PRDM4-205ENST00000550376 AS3MTQ9HBK9 375 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms