RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 CTSWP56202 376 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 LACTBP83111 547 aaPredicted RBP13.23□□□□□ -0.29
VDR-208ENST00000550325 FUT2Q10981 343 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 KIAA0895Q8NCT3 520 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 ZNF570Q96NI8 536 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 FMO2Q99518 471 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 LBHD1Q9BQE6 289 aaPredicted RBP13.23□□□□□ -0.29
VDR-208ENST00000550325 BATF3Q9NR55 127 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 TRIM33Q9UPN9 1127 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 AGAP1Q9UPQ3 857 aa13.23□□□□□ -0.29
VDR-208ENST00000550325 MYO5AQ9Y4I1 1855 aaKnown RBP13.23□□□□□ -0.29
VDR-208ENST00000550325 SERPING1P05155 500 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 ATP11AP98196 1134 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 MKRN4PQ13434 485 aaPredicted RBP13.22□□□□□ -0.29
VDR-208ENST00000550325 DENND2CQ68D51 928 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 SV2BQ7L1I2 683 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 HOOK3Q86VS8 718 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 GLIS3Q8NEA6 775 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 MAGEC3Q8TD91 643 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 OSBPL1AQ9BXW6 950 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 MTFR1LQ9H019 292 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 NSRP1Q9H0G5 558 aaKnown RBP13.22□□□□□ -0.29
VDR-208ENST00000550325 KBTBD4Q9NVX7 518 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 MYH6P13533 1939 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 IFI35P80217 286 aaPredicted RBP13.22□□□□□ -0.29
VDR-208ENST00000550325 PPP2R5BQ15173 497 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 LACTB2Q53H82 288 aaPredicted RBP13.22□□□□□ -0.29
VDR-208ENST00000550325 GIGYF2Q6Y7W6 1299 aaKnown RBP13.22□□□□□ -0.29
VDR-208ENST00000550325 ADGRA1Q86SQ6 560 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 CEP120Q8N960 986 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 FAM129AQ9BZQ8 928 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 KAT6BQ8WYB5 2073 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 H0YGN5 161 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 MXRA7P84157 204 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 GRIK3Q13003 919 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 FIGNQ5HY92 759 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 AGBL2Q5U5Z8 902 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 MARCH10Q8NA82 808 aaPredicted RBP13.22□□□□□ -0.29
VDR-208ENST00000550325 BAP1Q92560 729 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 SNX24Q9Y343 169 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 NFS1Q9Y697 457 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 ARHGAP23Q9P227 1491 aa13.22□□□□□ -0.29
VDR-208ENST00000550325 GOLGA8HP0CJ92 632 aa13.21□□□□□ -0.29
VDR-208ENST00000550325 CACNB1Q02641 598 aaPredicted RBP13.21□□□□□ -0.29
VDR-208ENST00000550325 SPTY2D1Q68D10 685 aaPredicted RBP13.21□□□□□ -0.29
VDR-208ENST00000550325 GDAP1Q8TB36 358 aa13.21□□□□□ -0.29
VDR-208ENST00000550325 ANKS1AQ92625 1134 aa13.21□□□□□ -0.29
VDR-208ENST00000550325 ISCA1Q9BUE6 129 aa13.21□□□□□ -0.29
VDR-208ENST00000550325 ZCWPW1Q9H0M4 648 aa13.21□□□□□ -0.29
VDR-208ENST00000550325 CNOT10Q9H9A5 744 aaKnown RBP13.21□□□□□ -0.29
VDR-208ENST00000550325 FBXO3Q9UK99 471 aa13.21□□□□□ -0.29
VDR-208ENST00000550325 JAG2Q9Y219 1238 aa13.21□□□□□ -0.29
VDR-208ENST00000550325 F8VZ95 297 aa13.21□□□□□ -0.29
VDR-208ENST00000550325 H0Y3Z8 333 aa13.21□□□□□ -0.29
VDR-208ENST00000550325 NQO1P15559 274 aaKnown RBP13.21□□□□□ -0.29
VDR-208ENST00000550325 ARID4AP29374 1257 aaPredicted RBP13.21□□□□□ -0.29
VDR-208ENST00000550325 LLGL1Q15334 1064 aa13.21□□□□□ -0.29
VDR-208ENST00000550325 TCERG1LQ5VWI1 586 aa13.21□□□□□ -0.29
VDR-208ENST00000550325 TMC3Q7Z5M5 1100 aa13.21□□□□□ -0.29
VDR-208ENST00000550325 METTL13Q8N6R0 699 aa13.21□□□□□ -0.29
VDR-208ENST00000550325 PJA2O43164 708 aa13.21□□□□□ -0.3
VDR-208ENST00000550325 FGGP02679 453 aa13.21□□□□□ -0.3
VDR-208ENST00000550325 PFKFB3Q16875 520 aaPredicted RBP13.21□□□□□ -0.3
VDR-208ENST00000550325 P3H4Q92791 437 aa13.21□□□□□ -0.3
VDR-208ENST00000550325 PAIP2Q9BPZ3 127 aaKnown RBP13.21□□□□□ -0.3
VDR-208ENST00000550325 DBR1Q9UK59 544 aaKnown RBP13.21□□□□□ -0.3
VDR-208ENST00000550325 ATP6V0A2Q9Y487 856 aa13.21□□□□□ -0.3
VDR-208ENST00000550325 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.21□□□□□ -0.3
VDR-208ENST00000550325 LMO7Q8WWI1 1683 aa13.21□□□□□ -0.3
VDR-208ENST00000550325 GHRP10912 638 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 ERMARDQ5T6L9 678 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 ZSCAN29Q8IWY8 852 aaPredicted RBP13.2□□□□□ -0.3
VDR-208ENST00000550325 C3orf20Q8ND61 904 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 FGFR1OP2Q9NVK5 253 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 PCDHA4Q9UN74 947 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 C5P01031 1676 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 ACTN1P12814 892 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 NUGGCQ68CJ6 796 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 HGSNATQ68CP4 663 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 DNAJC10Q8IXB1 793 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 TSC22D3Q99576 134 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 ZMYND12Q9H0C1 365 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 TLR2O60603 784 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 ABCB4P21439 1286 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 ECHS1P30084 290 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 ZNF211Q13398 564 aaPredicted RBP13.2□□□□□ -0.3
VDR-208ENST00000550325 SLC18A3Q16572 532 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 GLG1Q92896 1179 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 PPP1R12CQ9BZL4 782 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 ARHGEF10LQ9HCE6 1279 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 PNMA3Q9UL41 463 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 GOLGA6L10A0A0M3HER8 536 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 OR52Z1P0C646 297 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 ATP2A2P16615 1042 aaKnown RBP13.2□□□□□ -0.3
VDR-208ENST00000550325 HNRNPH3P31942 346 aaKnown RBP13.2□□□□□ -0.3
VDR-208ENST00000550325 CTCFP49711 727 aaPredicted RBP13.2□□□□□ -0.3
VDR-208ENST00000550325 SESN3P58005 492 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 EMC10Q5UCC4 262 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 MIS18BP1Q6P0N0 1132 aa13.2□□□□□ -0.3
VDR-208ENST00000550325 C4orf32Q8N8J7 132 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms