RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 TBX21Q9UL17 535 aa13.5□□□□□ -0.25
PFDN5-208ENST00000549995 NR2E3Q9Y5X4 410 aa13.5□□□□□ -0.25
PFDN5-208ENST00000549995 TRIP12Q14669 1992 aaPredicted RBP13.49□□□□□ -0.25
PFDN5-208ENST00000549995 IGSF9BQ9UPX0 1349 aa13.49□□□□□ -0.25
PFDN5-208ENST00000549995 ARID2Q68CP9 1835 aa13.49□□□□□ -0.25
PFDN5-208ENST00000549995 NOP56O00567 594 aaKnown RBP13.49□□□□□ -0.25
PFDN5-208ENST00000549995 EVI5O60447 810 aa13.49□□□□□ -0.25
PFDN5-208ENST00000549995 MYCNP04198 464 aaPredicted RBP13.49□□□□□ -0.25
PFDN5-208ENST00000549995 ZNF286BP0CG31 522 aa13.49□□□□□ -0.25
PFDN5-208ENST00000549995 TCF7P36402 384 aaPredicted RBP13.49□□□□□ -0.25
PFDN5-208ENST00000549995 PSMC6P62333 389 aa13.49□□□□□ -0.25
PFDN5-208ENST00000549995 TLE2Q04725 743 aa13.49□□□□□ -0.25
PFDN5-208ENST00000549995 RBL2Q08999 1139 aa13.49□□□□□ -0.25
PFDN5-208ENST00000549995 FAAP100Q0VG06 881 aa13.49□□□□□ -0.25
PFDN5-208ENST00000549995 MFSD10Q14728 455 aa13.49□□□□□ -0.25
PFDN5-208ENST00000549995 LETM2Q2VYF4 491 aa13.49□□□□□ -0.25
PFDN5-208ENST00000549995 NBPF20Q3BBV1 942 aa13.49□□□□□ -0.25
PFDN5-208ENST00000549995 FAM20AQ96MK3 541 aa13.49□□□□□ -0.25
PFDN5-208ENST00000549995 CTAGE1Q96RT6 745 aa13.49□□□□□ -0.25
PFDN5-208ENST00000549995 DDX25Q9UHL0 483 aaKnown RBP13.49□□□□□ -0.25
PFDN5-208ENST00000549995 SIP14410 1827 aa13.48□□□□□ -0.25
PFDN5-208ENST00000549995 KAT6AQ92794 2004 aa13.48□□□□□ -0.25
PFDN5-208ENST00000549995 H3BRB1 525 aa13.48□□□□□ -0.25
PFDN5-208ENST00000549995 WNT7AO00755 349 aa13.48□□□□□ -0.25
PFDN5-208ENST00000549995 CLTBP09497 229 aa13.48□□□□□ -0.25
PFDN5-208ENST00000549995 SUPT20HL2P0C7V6 817 aa13.48□□□□□ -0.25
PFDN5-208ENST00000549995 SLC26A2P50443 739 aa13.48□□□□□ -0.25
PFDN5-208ENST00000549995 ADAM17P78536 824 aa13.48□□□□□ -0.25
PFDN5-208ENST00000549995 GUCY1B3Q02153 619 aa13.48□□□□□ -0.25
PFDN5-208ENST00000549995 KIAA0753Q2KHM9 967 aa13.48□□□□□ -0.25
PFDN5-208ENST00000549995 PRPF38BQ5VTL8 546 aaKnown RBP13.48□□□□□ -0.25
PFDN5-208ENST00000549995 PLPPR4Q7Z2D5 763 aa13.48□□□□□ -0.25
PFDN5-208ENST00000549995 HSCBQ8IWL3 235 aa13.48□□□□□ -0.25
PFDN5-208ENST00000549995 HAS1Q92839 578 aa13.48□□□□□ -0.25
PFDN5-208ENST00000549995 MTMR9Q96QG7 549 aa13.48□□□□□ -0.25
PFDN5-208ENST00000549995 PRO3102Q9H379 93 aa13.48□□□□□ -0.25
PFDN5-208ENST00000549995 TUT1Q9H6E5 874 aaKnown RBP13.48□□□□□ -0.25
PFDN5-208ENST00000549995 GTF2IRD1Q9UHL9 959 aa13.48□□□□□ -0.25
PFDN5-208ENST00000549995 VAV3Q9UKW4 847 aa13.48□□□□□ -0.25
PFDN5-208ENST00000549995 ATP11BQ9Y2G3 1177 aa13.48□□□□□ -0.25
PFDN5-208ENST00000549995 DCDC2CA8MYV0 355 aa13.47□□□□□ -0.25
PFDN5-208ENST00000549995 TLR3O15455 904 aaKnown RBP13.47□□□□□ -0.25
PFDN5-208ENST00000549995 CCNT1O60563 726 aaKnown RBP13.47□□□□□ -0.25
PFDN5-208ENST00000549995 PDCP20941 246 aa13.47□□□□□ -0.25
PFDN5-208ENST00000549995 SFNP31947 248 aa13.47□□□□□ -0.25
PFDN5-208ENST00000549995 FOSBP53539 338 aa13.47□□□□□ -0.25
PFDN5-208ENST00000549995 SPIRE1Q08AE8 756 aa13.47□□□□□ -0.25
PFDN5-208ENST00000549995 PPP2R5CQ13362 524 aa13.47□□□□□ -0.25
PFDN5-208ENST00000549995 C7orf61Q8IZ16 206 aa13.47□□□□□ -0.25
PFDN5-208ENST00000549995 DPF3Q92784 378 aa13.47□□□□□ -0.25
PFDN5-208ENST00000549995 TEKT3Q9BXF9 490 aa13.47□□□□□ -0.25
PFDN5-208ENST00000549995 SMARCAD1Q9H4L7 1026 aa13.47□□□□□ -0.25
PFDN5-208ENST00000549995 ERAP1Q9NZ08 941 aa13.47□□□□□ -0.25
PFDN5-208ENST00000549995 PKD2L1Q9P0L9 805 aa13.47□□□□□ -0.25
PFDN5-208ENST00000549995 ZNF215Q9UL58 517 aaPredicted RBP13.47□□□□□ -0.25
PFDN5-208ENST00000549995 MAFBQ9Y5Q3 323 aaPredicted RBP13.47□□□□□ -0.25
PFDN5-208ENST00000549995 TRIM43BA6NCK2 446 aa13.46□□□□□ -0.25
PFDN5-208ENST00000549995 WDR64B1ANS9 1081 aa13.46□□□□□ -0.25
PFDN5-208ENST00000549995 SORBS3O60504 671 aa13.46□□□□□ -0.25
PFDN5-208ENST00000549995 B4GALT4O60513 344 aa13.46□□□□□ -0.25
PFDN5-208ENST00000549995 PQBP1O60828 265 aaKnown RBP13.46□□□□□ -0.25
PFDN5-208ENST00000549995 TOB1P50616 345 aaPredicted RBP13.46□□□□□ -0.25
PFDN5-208ENST00000549995 JAK3P52333 1124 aa13.46□□□□□ -0.25
PFDN5-208ENST00000549995 LRCH2Q5VUJ6 765 aa13.46□□□□□ -0.25
PFDN5-208ENST00000549995 LARP1BQ659C4 914 aaKnown RBP13.46□□□□□ -0.25
PFDN5-208ENST00000549995 TRIM50Q86XT4 487 aa13.46□□□□□ -0.25
PFDN5-208ENST00000549995 CCDC60Q8IWA6 550 aaPredicted RBP13.46□□□□□ -0.25
PFDN5-208ENST00000549995 SLFN12Q8IYM2 578 aa13.46□□□□□ -0.25
PFDN5-208ENST00000549995 TRIM43Q96BQ3 446 aaPredicted RBP13.46□□□□□ -0.25
PFDN5-208ENST00000549995 UNC45AQ9H3U1 944 aa13.46□□□□□ -0.25
PFDN5-208ENST00000549995 PCDHA10Q9Y5I2 948 aa13.46□□□□□ -0.25
PFDN5-208ENST00000549995 LOXHD1Q8IVV2 1947 aa13.46□□□□□ -0.25
PFDN5-208ENST00000549995 GAS7O60861 476 aa13.45□□□□□ -0.26
PFDN5-208ENST00000549995 PDIA4P13667 645 aaKnown RBP13.45□□□□□ -0.26
PFDN5-208ENST00000549995 HIC1Q14526 733 aa13.45□□□□□ -0.26
PFDN5-208ENST00000549995 GDF6Q6KF10 455 aaPredicted RBP13.45□□□□□ -0.26
PFDN5-208ENST00000549995 MIS18BP1Q6P0N0 1132 aa13.45□□□□□ -0.26
PFDN5-208ENST00000549995 SH3RF1Q7Z6J0 888 aa13.45□□□□□ -0.26
PFDN5-208ENST00000549995 C4orf32Q8N8J7 132 aa13.45□□□□□ -0.26
PFDN5-208ENST00000549995 GDF15Q99988 308 aa13.45□□□□□ -0.26
PFDN5-208ENST00000549995 HDAC6Q9UBN7 1215 aa13.45□□□□□ -0.26
PFDN5-208ENST00000549995 COL1A2P08123 1366 aa13.45□□□□□ -0.26
PFDN5-208ENST00000549995 NRCAMQ92823 1304 aa13.44□□□□□ -0.26
PFDN5-208ENST00000549995 MBLAC1A4D2B0 266 aaPredicted RBP13.44□□□□□ -0.26
PFDN5-208ENST00000549995 H0YGN5 161 aa13.44□□□□□ -0.26
PFDN5-208ENST00000549995 PITPNM1O00562 1244 aa13.44□□□□□ -0.26
PFDN5-208ENST00000549995 NEMFO60524 1076 aa13.44□□□□□ -0.26
PFDN5-208ENST00000549995 PSAPP07602 524 aa13.44□□□□□ -0.26
PFDN5-208ENST00000549995 SMIM10L2AP0DMW4 78 aa13.44□□□□□ -0.26
PFDN5-208ENST00000549995 SMIM10L2BP0DMW5 78 aa13.44□□□□□ -0.26
PFDN5-208ENST00000549995 ATP4AP20648 1035 aa13.44□□□□□ -0.26
PFDN5-208ENST00000549995 SYT1P21579 422 aa13.44□□□□□ -0.26
PFDN5-208ENST00000549995 BMP8BP34820 402 aa13.44□□□□□ -0.26
PFDN5-208ENST00000549995 STAT5BP51692 787 aa13.44□□□□□ -0.26
PFDN5-208ENST00000549995 PTK7Q13308 1070 aa13.44□□□□□ -0.26
PFDN5-208ENST00000549995 TRIM71Q2Q1W2 868 aaKnown RBP13.44□□□□□ -0.26
PFDN5-208ENST00000549995 RILPL1Q5EBL4 403 aa13.44□□□□□ -0.26
PFDN5-208ENST00000549995 TTC38Q5R3I4 469 aa13.44□□□□□ -0.26
PFDN5-208ENST00000549995 FAM160B1Q5W0V3 765 aa13.44□□□□□ -0.26
PFDN5-208ENST00000549995 BRAPQ7Z569 592 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms