RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 PHF7Q9BWX1 381 aaPredicted RBP14.18□□□□□ -0.14
DDX54-206ENST00000549271 COL20A1Q9P218 1284 aa14.18□□□□□ -0.14
DDX54-206ENST00000549271 USP15Q9Y4E8 981 aaPredicted RBP14.18□□□□□ -0.14
DDX54-206ENST00000549271 ABCB11O95342 1321 aa14.17□□□□□ -0.14
DDX54-206ENST00000549271 GLP2RO95838 553 aa14.17□□□□□ -0.14
DDX54-206ENST00000549271 GOLGA8HP0CJ92 632 aa14.17□□□□□ -0.14
DDX54-206ENST00000549271 PTPN21Q16825 1174 aa14.17□□□□□ -0.14
DDX54-206ENST00000549271 ADGRD2Q7Z7M1 963 aa14.17□□□□□ -0.14
DDX54-206ENST00000549271 SYTL5Q8TDW5 730 aaPredicted RBP14.17□□□□□ -0.14
DDX54-206ENST00000549271 TBC1D5Q92609 795 aa14.17□□□□□ -0.14
DDX54-206ENST00000549271 ATP6V0A1Q93050 837 aa14.17□□□□□ -0.14
DDX54-206ENST00000549271 DSCC1Q9BVC3 393 aa14.17□□□□□ -0.14
DDX54-206ENST00000549271 PLVAPQ9BX97 442 aa14.17□□□□□ -0.14
DDX54-206ENST00000549271 UBA5Q9GZZ9 404 aa14.17□□□□□ -0.14
DDX54-206ENST00000549271 PLAGL2Q9UPG8 496 aa14.17□□□□□ -0.14
DDX54-206ENST00000549271 MYH6P13533 1939 aa14.17□□□□□ -0.14
DDX54-206ENST00000549271 KMT2BQ9UMN6 2715 aaPredicted RBP14.16□□□□□ -0.14
DDX54-206ENST00000549271 TREHO43280 583 aa14.16□□□□□ -0.14
DDX54-206ENST00000549271 KDM4AO75164 1064 aa14.16□□□□□ -0.14
DDX54-206ENST00000549271 EIF3JO75822 258 aaKnown RBP14.16□□□□□ -0.14
DDX54-206ENST00000549271 PDGFBP01127 241 aaPredicted RBP14.16□□□□□ -0.14
DDX54-206ENST00000549271 DNAJB1P25685 340 aa14.16□□□□□ -0.14
DDX54-206ENST00000549271 CHMLP26374 656 aa14.16□□□□□ -0.14
DDX54-206ENST00000549271 CDC37Q16543 378 aaPredicted RBP14.16□□□□□ -0.14
DDX54-206ENST00000549271 ASPRV1Q53RT3 343 aa14.16□□□□□ -0.14
DDX54-206ENST00000549271 MYSM1Q5VVJ2 828 aa14.16□□□□□ -0.14
DDX54-206ENST00000549271 MCF2L2Q86YR7 1114 aa14.16□□□□□ -0.14
DDX54-206ENST00000549271 ADGRF4Q8IZF3 695 aa14.16□□□□□ -0.14
DDX54-206ENST00000549271 P2RX5Q93086 422 aa14.16□□□□□ -0.14
DDX54-206ENST00000549271 PPP2R3CQ969Q6 453 aa14.16□□□□□ -0.14
DDX54-206ENST00000549271 ZNF689Q96CS4 500 aaPredicted RBP14.16□□□□□ -0.14
DDX54-206ENST00000549271 RIPOR3Q96MK2 946 aa14.16□□□□□ -0.14
DDX54-206ENST00000549271 ZSCAN10Q96SZ4 725 aaPredicted RBP14.16□□□□□ -0.14
DDX54-206ENST00000549271 ZKSCAN3Q9BRR0 538 aa14.16□□□□□ -0.14
DDX54-206ENST00000549271 C16orf70Q9BSU1 422 aa14.16□□□□□ -0.14
DDX54-206ENST00000549271 KAT14Q9H8E8 782 aa14.16□□□□□ -0.14
DDX54-206ENST00000549271 MRVI1Q9Y6F6 885 aa14.16□□□□□ -0.14
DDX54-206ENST00000549271 PLXNA4Q9HCM2 1894 aa14.16□□□□□ -0.14
DDX54-206ENST00000549271 DNAH14Q0VDD8 3507 aa14.16□□□□□ -0.14
DDX54-206ENST00000549271 C17orf102A2RUQ5 167 aa14.15□□□□□ -0.14
DDX54-206ENST00000549271 CSPG5O95196 566 aa14.15□□□□□ -0.14
DDX54-206ENST00000549271 CTSHP09668 335 aa14.15□□□□□ -0.14
DDX54-206ENST00000549271 ATF7P17544 494 aaPredicted RBP14.15□□□□□ -0.14
DDX54-206ENST00000549271 GHRHRQ02643 423 aa14.15□□□□□ -0.14
DDX54-206ENST00000549271 HSDL1Q3SXM5 330 aa14.15□□□□□ -0.14
DDX54-206ENST00000549271 USH1GQ495M9 461 aa14.15□□□□□ -0.14
DDX54-206ENST00000549271 FAM26DQ5JW98 314 aa14.15□□□□□ -0.14
DDX54-206ENST00000549271 ENAHQ8N8S7 591 aaPredicted RBP14.15□□□□□ -0.14
DDX54-206ENST00000549271 SUSD6Q92537 303 aa14.15□□□□□ -0.14
DDX54-206ENST00000549271 RPGRIP1Q96KN7 1286 aa14.15□□□□□ -0.14
DDX54-206ENST00000549271 RMDN3Q96TC7 470 aa14.15□□□□□ -0.14
DDX54-206ENST00000549271 CPVLQ9H3G5 476 aa14.15□□□□□ -0.14
DDX54-206ENST00000549271 ZSWIM5Q9P217 1185 aa14.15□□□□□ -0.14
DDX54-206ENST00000549271 BARX2Q9UMQ3 279 aaPredicted RBP14.15□□□□□ -0.14
DDX54-206ENST00000549271 EPG5Q9HCE0 2579 aa14.15□□□□□ -0.14
DDX54-206ENST00000549271 FRYLO94915 3013 aa14.15□□□□□ -0.15
DDX54-206ENST00000549271 MYO10Q9HD67 2058 aa14.14□□□□□ -0.15
DDX54-206ENST00000549271 ITGB1P05556 798 aa14.14□□□□□ -0.15
DDX54-206ENST00000549271 SMIM10L2AP0DMW4 78 aa14.14□□□□□ -0.15
DDX54-206ENST00000549271 SMIM10L2BP0DMW5 78 aa14.14□□□□□ -0.15
DDX54-206ENST00000549271 NAALADL2Q58DX5 795 aa14.14□□□□□ -0.15
DDX54-206ENST00000549271 SPPL3Q8TCT6 385 aa14.14□□□□□ -0.15
DDX54-206ENST00000549271 KRT23Q9C075 422 aa14.14□□□□□ -0.15
DDX54-206ENST00000549271 RNPEPQ9H4A4 650 aa14.14□□□□□ -0.15
DDX54-206ENST00000549271 CNNM2Q9H8M5 875 aa14.14□□□□□ -0.15
DDX54-206ENST00000549271 MRPL11Q9Y3B7 192 aaKnown RBP14.14□□□□□ -0.15
DDX54-206ENST00000549271 KAT6AQ92794 2004 aa14.14□□□□□ -0.15
DDX54-206ENST00000549271 B4E1Z4 1266 aa14.13□□□□□ -0.15
DDX54-206ENST00000549271 RGS20O76081 388 aa14.13□□□□□ -0.15
DDX54-206ENST00000549271 NR3C2P08235 984 aa14.13□□□□□ -0.15
DDX54-206ENST00000549271 NRIP1P48552 1158 aa14.13□□□□□ -0.15
DDX54-206ENST00000549271 BTG3Q14201 252 aaPredicted RBP14.13□□□□□ -0.15
DDX54-206ENST00000549271 IMMTQ16891 758 aaKnown RBP14.13□□□□□ -0.15
DDX54-206ENST00000549271 QRICH1Q2TAL8 776 aa14.13□□□□□ -0.15
DDX54-206ENST00000549271 CELF3Q5SZQ8 465 aaKnown RBP14.13□□□□□ -0.15
DDX54-206ENST00000549271 TMEM105Q8N8V8 129 aa14.13□□□□□ -0.15
DDX54-206ENST00000549271 NKD2Q969F2 451 aaPredicted RBP14.13□□□□□ -0.15
DDX54-206ENST00000549271 SPATA33Q96N06 139 aa14.13□□□□□ -0.15
DDX54-206ENST00000549271 JMJD4Q9H9V9 463 aa14.13□□□□□ -0.15
DDX54-206ENST00000549271 MAP3K20Q9NYL2 800 aaKnown RBP14.13□□□□□ -0.15
DDX54-206ENST00000549271 H3BRB1 525 aa14.12□□□□□ -0.15
DDX54-206ENST00000549271 DGKIO75912 1065 aa14.12□□□□□ -0.15
DDX54-206ENST00000549271 PARP1P09874 1014 aaKnown RBP14.12□□□□□ -0.15
DDX54-206ENST00000549271 EIF2AK2P19525 551 aaKnown RBP14.12□□□□□ -0.15
DDX54-206ENST00000549271 PTH1RQ03431 593 aa14.12□□□□□ -0.15
DDX54-206ENST00000549271 ARHGEF16Q5VV41 709 aa14.12□□□□□ -0.15
DDX54-206ENST00000549271 SKAP1Q86WV1 359 aa14.12□□□□□ -0.15
DDX54-206ENST00000549271 ADSSL1Q8N142 457 aa14.12□□□□□ -0.15
DDX54-206ENST00000549271 SAMD3Q8N6K7 520 aa14.12□□□□□ -0.15
DDX54-206ENST00000549271 ATP8B4Q8TF62 1192 aa14.12□□□□□ -0.15
DDX54-206ENST00000549271 MTMR8Q96EF0 704 aa14.12□□□□□ -0.15
DDX54-206ENST00000549271 TUT1Q9H6E5 874 aaKnown RBP14.12□□□□□ -0.15
DDX54-206ENST00000549271 PXMP2Q9NR77 195 aa14.12□□□□□ -0.15
DDX54-206ENST00000549271 MRPL42Q9Y6G3 142 aaKnown RBP14.12□□□□□ -0.15
DDX54-206ENST00000549271 EP300Q09472 2414 aaPredicted RBP14.11□□□□□ -0.15
DDX54-206ENST00000549271 ENPP3O14638 875 aa14.11□□□□□ -0.15
DDX54-206ENST00000549271 SGSM2O43147 1006 aa14.11□□□□□ -0.15
DDX54-206ENST00000549271 GGPS1O95749 300 aa14.11□□□□□ -0.15
DDX54-206ENST00000549271 HSD17B4P51659 736 aa14.11□□□□□ -0.15
DDX54-206ENST00000549271 ADAM17P78536 824 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms